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AMDSBA1_31_19

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(19743..20186)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 135.0
  • Bit_score: 159
  • Evalue 8.90e-37
PAS domain S-box n=1 Tax=Microvirga sp. WSM3557 RepID=I4YS57_9RHIZ (db=UNIREF evalue=1.2e-34 bit_score=151.8 identity=53.8 coverage=95.27027027027027) similarity UNIREF
DB: UNIREF
  • Identity: 53.8
  • Coverage: 95.27
  • Bit_score: 151
  • Evalue 1.20e-34
PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=18 to=135 evalue=2.3e-25) iprscan interpro
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGGATTGGGACGAAACACGATTCGCGGTAAGCCTGGTTGAACACATGTCCGACGCAGTCGTCTATGCCAACGCAAGCGGCAATATTCTCTTCTGGAATGAGGGTGCCAAGCGAATATTCGGTTTTGAACAATCCGAAGCCCTAGGACAATCGCTCGACATTATCATCCCGGAAAATTTGCGTCGCCGGCATTGGGACGGTTTTGAGACCACCATGCGTACGGGCAAAAGTCACTATGAGGCGGGGGCTTTGCTGGCGGTACCGGCTATTCGCAAGGACGGTTCCAGGATCTCGGTCGAGTTCACCATTTTGCCATTTCATGACGACTCTGGACAAATGATGGGCATTGCCGCGGTAATGCGGGACGTGTCCCAACAATTTCAGGAAATGCGCAAGTTAAAGAAAGATCTTGCGTTGTGTCAGGCGCAGTCTACTTCGAAGTGA
PROTEIN sequence
Length: 148
MDWDETRFAVSLVEHMSDAVVYANASGNILFWNEGAKRIFGFEQSEALGQSLDIIIPENLRRRHWDGFETTMRTGKSHYEAGALLAVPAIRKDGSRISVEFTILPFHDDSGQMMGIAAVMRDVSQQFQEMRKLKKDLALCQAQSTSK*