ggKbase home page

AMDSBA1_37_7

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 6884..7330

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 116.0
  • Bit_score: 69
  • Evalue 1.20e-09
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=136 evalue=2.6e-29) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.60e-29
no description (db=HMMSmart db_id=SM00347 from=23 to=123 evalue=1.2e-15 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium rhodesiae → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 447
GTGGATCGAGAAGAATTGGCGGTCGAATTACAAAAATTAATCCGGGAGATTCAGCGCGGATTTCGTCCACATCCCAAGACATTGACCCTTCGCCCCGGTGAAATGCGGGCCTTATGGATTGTCGCACGGCATGGGCCGTTGCGGAAATCGGACTTAGCGGATATCTTGGGTATTTCGAAACCCTTGGTATCTTCTTTGGCCCGCACCCTGGAAAATCTGGGGCTGATAACCCAAAGCGTTCCGGAACGCGATCACAGACGTCGCGTCATTGCGCTTTCGGAGAAGGGTCAACATGTCCTCGACGAAATGAGAGCTCTCCGTCAGGAACGCATGACGGCTTTATTCGAACGGCTGACTGAAGAAGAACAGGAAATGCTGTATCATCTCTTGCAGAAATTGCGGGAGCCGGGCGAAGAGGAAGCGGAACCGCGGCAGCGAATGCGCTAA
PROTEIN sequence
Length: 149
VDREELAVELQKLIREIQRGFRPHPKTLTLRPGEMRALWIVARHGPLRKSDLADILGISKPLVSSLARTLENLGLITQSVPERDHRRRVIALSEKGQHVLDEMRALRQERMTALFERLTEEEQEMLYHLLQKLREPGEEEAEPRQRMR*