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AMDSBA1_37

Alias: AMDSBA1_C36

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_37_1
unknown

Not on your lists

1..96
DNA (96bp) protein (32aa)
1..96 + ( gc_cont=0.521)
AMDSBA1_37_2
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(291..845)
DNA (555bp) protein (185aa)
GCN5-related N-acetyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV76_9BACT (db=UNIREF evalue=3.5e-36 bit_score=157.1 identity=41.1 coverage=96.75675675675676)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=2 to=174 evalue=2.3e-44 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=6 to=182 evalue=1.5e-43 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
(db=HMMPfam db_id=PF00583 from=96 to=150 evalue=6.9e-07 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase (GNAT) domain GO=Molecular Function: N-acetyltransferase activity (GO:0008080))
AMDSBA1_37_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2784..3755)
DNA (972bp) protein (324aa)
hypothetical protein
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium cellulovorans 743B RepID=D9SVR8_CLOC7 (db=UNIREF evalue=5.9e-07 bit_score=60.8 identity=25.8 coverage=85.18518518518519)
seg (db=Seg db_id=seg from=68 to=87)
seg (db=Seg db_id=seg from=118 to=129)
AMDSBA1_37_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3766..4974)
DNA (1209bp) protein (403aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DMC5_9GAMM (db=UNIREF evalue=2.6e-12 bit_score=79.0 identity=26.8 coverage=53.349875930521094)
seg (db=Seg db_id=seg from=359 to=372)
seg (db=Seg db_id=seg from=332 to=349)
AMDSBA1_37_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4967..5656)
DNA (690bp) protein (230aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Macrolide ABC efflux protein n=1 Tax=Cellvibrio sp. BR RepID=I3IBY0_9GAMM (db=UNIREF evalue=5.6e-60 bit_score=236.5 identity=53.4 coverage=95.65217391304348)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=4 to=221 evalue=8.1e-115)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=144 to=158 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
AMDSBA1_37_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5661..6725)
DNA (1065bp) protein (355aa)
RND family efflux transporter MFP subunit n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKC2_9RHIZ (db=UNIREF evalue=1.0e-07 bit_score=63.5 identity=30.3 coverage=55.49295774647888)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
seg (db=Seg db_id=seg from=340 to=353)
seg (db=Seg db_id=seg from=10 to=17)
AMDSBA1_37_7
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6884..7330
DNA (447bp) protein (149aa)
transcriptional regulator
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=136 evalue=2.6e-29)
no description (db=HMMSmart db_id=SM00347 from=23 to=123 evalue=1.2e-15 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=30 to=103 evalue=1.1e-10 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
AMDSBA1_37_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7460..7948)
DNA (489bp) protein (163aa)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=141 evalue=1.8e-27)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=34 to=107 evalue=2.4e-12 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
(db=HMMPfam db_id=PF01047 from=34 to=91 evalue=2.4e-10 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=HMMSmart db_id=SM00347 from=27 to=127 evalue=5.1e-10 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA1_37_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8149..10281
DNA (2133bp) protein (711aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter, permease/ATP-binding protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V163_9ACTO (db=UNIREF evalue=4.7e-65 bit_score=255.0 identity=30.5 coverage=81.29395218002813)
seg (db=Seg db_id=seg from=265 to=277)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=297)
AMDSBA1_37_10
unknown

Not on your lists

10714..10938
DNA (225bp) protein (75aa)
10714..10938 + ( gc_cont=0.471)
AMDSBA1_37_11
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11031..12242
DNA (1212bp) protein (404aa)
rtcB; rtcB protein
Putative uncharacterized protein n=4 Tax=Comamonas testosteroni RepID=B7WSJ3_COMTE (db=UNIREF evalue=1.8e-21 bit_score=109.4 identity=32.2 coverage=59.4059405940594)
Hypothetical protein PH1602 (db=superfamily db_id=SSF103365 from=7 to=403 evalue=1.3e-119 interpro_id=IPR001233 interpro_description=Uncharacterised protein family UPF0027)
(db=HMMPfam db_id=PF01139 from=10 to=403 evalue=2.7e-119 interpro_id=IPR001233 interpro_description=Uncharacterised protein family UPF0027)
AMDSBA1_37_12
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12250..13038
DNA (789bp) protein (263aa)
hypothetical protein
Integral membrane protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMA9_9BACT (db=UNIREF evalue=4.8e-47 bit_score=193.7 identity=48.9 coverage=84.03041825095056)
seg (db=Seg db_id=seg from=115 to=126)
seg (db=Seg db_id=seg from=81 to=96)
AMDSBA1_37_13
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13272..14153)
DNA (882bp) protein (294aa)
hypothetical protein rbh
LysR family (Fragment) n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QLA3_9ACTO (db=UNIREF evalue=4.3e-12 bit_score=77.8 identity=33.9 coverage=53.06122448979592)
seg (db=Seg db_id=seg from=35 to=49)
(db=HMMPfam db_id=PF03466 from=88 to=285 evalue=4.3e-40 interpro_id=IPR005119 interpro_description=LysR, substrate-binding)
AMDSBA1_37_14
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14260..15147
DNA (888bp) protein (296aa)
membrane protein rbh
Putative uncharacterized protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UD05_METS4 (db=UNIREF evalue=1.2e-38 bit_score=166.0 identity=39.0 coverage=95.27027027027027)
transmembrane_regions (db=TMHMM db_id=tmhmm from=263 to=285)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=113)
AMDSBA1_37_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15299..16531)
DNA (1233bp) protein (411aa)
imidazolonepropionase (EC:3.5.2.7)
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=2 Tax=Sulfobacillus acidophilus RepID=G8TVM1_9FIRM (db=UNIREF evalue=1.3e-94 bit_score=352.4 identity=45.6 coverage=96.35036496350365)
AMDSBA1_37_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16716..18107)
DNA (1392bp) protein (464aa)
cytosine/purines uracil thiamine allantoin permease rbh
Putative purine-cytosine permease yxlA n=11 Tax=Bacillus RepID=YXLA_BACSU (db=UNIREF evalue=9.4e-115 bit_score=419.5 identity=47.5 coverage=96.55172413793103)
seg (db=Seg db_id=seg from=279 to=292)
transmembrane_regions (db=TMHMM db_id=tmhmm from=313 to=335)
AMDSBA1_37_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18558..19454
DNA (897bp) protein (299aa)
SIS domain (db=superfamily db_id=SSF53697 from=102 to=268 evalue=6.4e-17)
no description (db=Gene3D db_id=G3DSA:3.40.50.10490 from=94 to=268 evalue=1.2e-14)
(db=HMMPfam db_id=PF01418 from=27 to=88 evalue=5.9e-13 interpro_id=IPR000281 interpro_description=Helix-turn-helix protein RpiR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF01380 from=142 to=260 evalue=4.2e-10 interpro_id=IPR001347 interpro_description=Sugar isomerase (SIS) GO=Molecular Function: sugar binding (GO:0005529), Biological Process: carbohydrate metabolic process (GO:0005975))
AMDSBA1_37_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19463..20716
DNA (1254bp) protein (418aa)
allantoate amidohydrolase
Amidase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RB04_9ACTO (db=UNIREF evalue=3.4e-47 bit_score=194.9 identity=35.4 coverage=92.34449760765551)
seg (db=Seg db_id=seg from=158 to=169)
ARGE_DAPE_CPG2_1 (db=PatternScan db_id=PS00758 from=75 to=84 evalue=0.0 interpro_id=IPR001261 interpro_description=ArgE/DapE/ACY1/CPG2/YscS, conserved site GO=Biological Process: proteolysis (GO:0006508), Molecular Function: metallopeptidase activity (GO:0008237))
AMDSBA1_37_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20721..22046
DNA (1326bp) protein (442aa)
hypothetical protein
hypothetical protein
S-adenosylhomocysteine deaminase n=2 Tax=Sulfobacillus acidophilus RepID=G8TVL6_9FIRM (db=UNIREF evalue=7.8e-143 bit_score=512.7 identity=57.5 coverage=99.3212669683258)
AMDSBA1_37_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22104..23798
DNA (1695bp) protein (565aa)
urocanate hydratase (EC:4.2.1.49)
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=2 Tax=Sulfobacillus acidophilus RepID=G8TVL5_9FIRM (db=UNIREF evalue=3.4e-244 bit_score=849.7 identity=74.3 coverage=98.4070796460177)
AMDSBA1_37_21
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24351..24485
DNA (135bp) protein (45aa)
seg (db=Seg db_id=seg from=28 to=43)
seg (db=Seg db_id=seg from=10 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=21)
AMDSBA1_37_22
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24834..26591)
DNA (1758bp) protein (586aa)
RQC domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RCL8_AMMDK (db=UNIREF evalue=1.1e-16 bit_score=94.0 identity=34.4 coverage=25.597269624573375)
RQC domain-containing protein
seg (db=Seg db_id=seg from=255 to=264)
(db=HMMPfam db_id=PF09382 from=428 to=505 evalue=9.3e-06 interpro_id=IPR018982 interpro_description=RQC domain GO=Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Molecular Function: ATP-dependent 3'-5' DNA helicase activity (GO:0043140))
AMDSBA1_37_23
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26588..28051)
DNA (1464bp) protein (488aa)
von Willebrand factor A
Protein containing von Willebrand factor type A (VWA) domain n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XTV0_9FIRM (db=UNIREF evalue=1.1e-12 bit_score=80.5 identity=23.7 coverage=58.19672131147541)
(db=HMMPfam db_id=PF05762 from=274 to=460 evalue=5.6e-24 interpro_id=IPR008912 interpro_description=Uncharacterised protein family CoxE-like)
vWA-like (db=superfamily db_id=SSF53300 from=311 to=485 evalue=5.5e-06)
AMDSBA1_37_24
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28048..28965)
DNA (918bp) protein (306aa)
ATPase rbh
ATPase n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8X6_9ARCH (db=UNIREF evalue=2.5e-55 bit_score=221.5 identity=41.8 coverage=91.83006535947712)
seg (db=Seg db_id=seg from=155 to=173)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=16 to=291 evalue=7.4e-34)
AMDSBA1_37_25
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29458..30309)
DNA (852bp) protein (284aa)
seg (db=Seg db_id=seg from=149 to=161)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=8 to=276 evalue=1.4e-24)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=53 to=170 evalue=1.1e-18)
(db=HMMPfam db_id=PF08241 from=57 to=153 evalue=2.2e-12 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
AMDSBA1_37_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30736..31122
DNA (387bp) protein (129aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U174_9FIRM (db=UNIREF evalue=1.2e-11 bit_score=75.1 identity=30.1 coverage=93.02325581395348)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U174_SULAD
Uncharacterized protein {ECO:0000313|EMBL:AEJ41246.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA1_37_27
unknown

Not on your lists

comp(31150..31353)
DNA (204bp) protein (68aa)
31150..31353 - ( gc_cont=0.515)
AMDSBA1_37_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31310..32014)
DNA (705bp) protein (235aa)
livF; ABC transporter
Thiamine import ATP-binding protein ThiQ n=1 Tax=Ruegeria sp. TM1040 RepID=THIQ_SILST (db=UNIREF evalue=1.4e-13 bit_score=82.4 identity=31.1 coverage=75.31914893617021)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=4 to=230 evalue=2.8e-68)
BRANCHED CHAIN AMINO ACID ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF13 from=4 to=230 evalue=2.8e-68)
AMDSBA1_37_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32051..32764)
DNA (714bp) protein (238aa)
livG; ABC transporter
ABC transporter, ATP-binding protein, putative n=3 Tax=Nitrosococcus RepID=B6C544_9GAMM (db=UNIREF evalue=7.9e-25 bit_score=119.8 identity=30.0 coverage=97.89915966386555)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=7 to=235 evalue=5.0e-68)
seg (db=Seg db_id=seg from=129 to=146)
AMDSBA1_37_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32754..33710)
DNA (957bp) protein (319aa)
amino acid ABC transporter
amino acid ABC transporter
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Acidilobus saccharovorans 345-15 RepID=D9Q1L8_ACIS3 (db=UNIREF evalue=4.1e-61 bit_score=240.7 identity=40.6 coverage=94.98432601880877)
seg (db=Seg db_id=seg from=168 to=179)
Displaying items 1-30 of 34 in total

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