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AMDSBA1_41_14

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 12365..12910

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein AATC3_39463 n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026266B3 (db=UNIREF evalue=1.5e-07 bit_score=62.0 identity=32.0 coverage=61.53846153846154) similarity UNIREF
DB: UNIREF
  • Identity: 32.0
  • Coverage: 61.54
  • Bit_score: 62
  • Evalue 1.50e-07
LigT-like (db=superfamily db_id=SSF55144 from=35 to=180 evalue=3.0e-11 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.00e-11

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Taxonomy

Amycolatopsis sp. ATCC 39116 → Amycolatopsis → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
TTGAACAGCGATGGCAACGCCCTTATCATTCCGGTGGCATTGCCCGAGGAACTCGAAACCCTGCGCCTTCAGGGGGATCCGGCTGCGCGGCAGCTGCCGGCTCACATAACCGTGCATTTTCCGTTTGCGGATGAACCTAAATCAAAGGTTGTAAACGCCGAATTGAAGAAGCTGGTCGGACGAATTGAAAGCTTTAGTATTCAATTCGATTCCCTAGGCCACTTCGATATGCCAGACGAAGTGATTTATTACTTAAAGGTGTTAATCATACCGGAGCTTGTATCGCTGTTTCATACAATTTGGAACAAATTTCCCGCATATCCGCCCTACGAAGGAAAACACGATACCATTATCCCCCACATTACTCTGGCCCGTTATCCGAGGCCCATTCCCGAAGAGAGGGTGAAACAACTGGAAGATGCCGTAAGCCGCAATCGCGACGGACTGCGGTGGGATATTTCGGAAGTGGAATGGATCAATGTGCAGCGAGGCGTTCCGGGGTGTAGAATTCTGGGAAGTTTTCCGCTTAAGAAAAAAAAGTCGTAA
PROTEIN sequence
Length: 182
LNSDGNALIIPVALPEELETLRLQGDPAARQLPAHITVHFPFADEPKSKVVNAELKKLVGRIESFSIQFDSLGHFDMPDEVIYYLKVLIIPELVSLFHTIWNKFPAYPPYEGKHDTIIPHITLARYPRPIPEERVKQLEDAVSRNRDGLRWDISEVEWINVQRGVPGCRILGSFPLKKKKS*