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AMDSBA1_41

Alias: AMDSBA1_C40

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA1_41_1
unknown

Not on your lists

1..255
-----------------
DNA (255bp)
protein (85aa)
1..255 + ( gc_cont=0.573)
AMDSBA1_41_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

867..1871
-----------------
DNA (1005bp)
protein (335aa)
AAA ATPase
Sporulation protein K-like protein n=4 Tax=Staphylococcus lugdunensis RepID=D3QFM5_STALH (db=UNIREF evalue=2.7e-47 bit_score=194.9 identity=33.5 coverage=90.44776119402985)
STAGE V SPORULATION PROTEIN K (db=HMMPanther db_id=PTHR18958:SF15 from=127 to=276 evalue=9.5e-74)
ANKYRIN REPEAT-CONTAINING (db=HMMPanther db_id=PTHR18958 from=127 to=276 evalue=9.5e-74)
AMDSBA1_41_3
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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1871..2479
-----------------
DNA (609bp)
protein (203aa)
GTP-binding protein HSR1-like protein
GTP-binding protein HSR1-related protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U082_9FIRM (db=UNIREF evalue=1.9e-27 bit_score=128.3 identity=35.7 coverage=96.55172413793103)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=191 evalue=6.7e-16)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=3 to=202 evalue=2.9e-08)
AMDSBA1_41_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2575..3792
-----------------
DNA (1218bp)
protein (406aa)
aluminum resistance protein
aluminum resistance protein
Aluminium resistance protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J653_9BACL (db=UNIREF evalue=2.0e-84 bit_score=318.5 identity=45.9 coverage=96.55172413793103)
AMDSBA1_41_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3757..4350)
-----------------
DNA (594bp)
protein (198aa)
SOS-response transcriptional repressor, LexA
LexA repressor n=2 Tax=Sulfobacillus acidophilus RepID=G8U080_9FIRM (db=UNIREF evalue=9.1e-59 bit_score=232.3 identity=62.4 coverage=96.96969696969697)
seg (db=Seg db_id=seg from=66 to=77)
lexA: repressor LexA (db=HMMTigr db_id=TIGR00498 from=1 to=197 evalue=2.2e-50 interpro_id=IPR006200 interpro_description=Peptidase S24, LexA repressor GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
AMDSBA1_41_6
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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4419..5405
-----------------
DNA (987bp)
protein (329aa)
metal-dependent membrane protease
Abortive infection protein n=1 Tax=Weeksella virosa DSM 16922 RepID=F0NZ71_WEEVC (db=UNIREF evalue=2.9e-09 bit_score=68.6 identity=37.0 coverage=27.35562310030395)
transmembrane_regions (db=TMHMM db_id=tmhmm from=305 to=327)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
AMDSBA1_41_7
unknown

Not on your lists

5454..5582
-----------------
DNA (129bp)
protein (43aa)
5454..5582 + ( gc_cont=0.512)
AMDSBA1_41_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5811..6950
-----------------
DNA (1140bp)
protein (380aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5Y0_9BACI (db=UNIREF evalue=2.0e-126 bit_score=458.0 identity=58.7 coverage=99.47368421052632)
seg (db=Seg db_id=seg from=248 to=263)
AMDSBA1_41_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7028..7351
-----------------
DNA (324bp)
protein (108aa)
Sterol-binding domain-containing protein
Sterol-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LS95_HALO1 (db=UNIREF evalue=2.0e-07 bit_score=60.8 identity=41.2 coverage=75.0)
NONSPECIFIC LIPID-TRANSFER PROTEIN (STEROL CARRIER PROTEIN X) (db=HMMPanther db_id=PTHR19410:SF115 from=5 to=95 evalue=2.6e-07)
Sterol carrier protein, SCP (db=superfamily db_id=SSF55718 from=1 to=107 evalue=4.2e-24 interpro_id=IPR003033 interpro_description=SCP2 sterol-binding domain GO=Molecular Function: sterol binding (GO:0032934))
AMDSBA1_41_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7391..8533
-----------------
DNA (1143bp)
protein (381aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Pyrolobus fumarii 1A RepID=G0EGR6_PYRF1 (db=UNIREF evalue=1.2e-54 bit_score=219.5 identity=36.8 coverage=98.4251968503937)
seg (db=Seg db_id=seg from=241 to=251)
THIOLASE_1 (db=PatternScan db_id=PS00098 from=85 to=103 evalue=0.0 interpro_id=IPR020615 interpro_description=Thiolase, acyl-enzyme intermediate active site GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747))
AMDSBA1_41_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8609..10132)
-----------------
DNA (1524bp)
protein (508aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U075_9FIRM (db=UNIREF evalue=1.7e-109 bit_score=402.1 identity=43.3 coverage=95.07874015748031)
AMDSBA1_41_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10129..10653)
-----------------
DNA (525bp)
protein (175aa)
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily n=2 Tax=Sulfobacillus acidophilus RepID=G8U074_9FIRM (db=UNIREF evalue=2.7e-62 bit_score=243.8 identity=69.8 coverage=94.85714285714286)
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=10 to=165 evalue=3.1e-28 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=8 to=101 evalue=2.4e-13 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto
AMDSBA1_41_13
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10759..11964)
-----------------
DNA (1206bp)
protein (402aa)
major facilitator superfamily protein
major facilitator superfamily protein
Putative uncharacterized protein n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3K9U9_PUCGT (db=UNIREF evalue=6.0e-09 bit_score=67.8 identity=26.3 coverage=43.78109452736319)
transmembrane_regions (db=TMHMM db_id=tmhmm from=282 to=301)
AMDSBA1_41_14
Amycolatopsis sp. ATCC 39116, Amycolatopsis, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

12365..12910
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein AATC3_39463 n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026266B3 (db=UNIREF evalue=1.5e-07 bit_score=62.0 identity=32.0 coverage=61.53846153846154)
LigT-like (db=superfamily db_id=SSF55144 from=35 to=180 evalue=3.0e-11 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070))
AMDSBA1_41_15
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

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comp(12945..13223)
-----------------
DNA (279bp)
protein (93aa)
PCD-like (db=superfamily db_id=SSF55248 from=1 to=92 evalue=5.7e-27 interpro_id=IPR001533 interpro_description=Transcriptional coactivator/pterin dehydratase GO=Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity (GO:0008124))
(db=HMMPfam db_id=PF01329 from=2 to=89 evalue=4.4e-25 interpro_id=IPR001533 interpro_description=Transcriptional coactivator/pterin dehydratase GO=Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity (GO:0008124))
no description (db=Gene3D db_id=G3DSA:3.30.1360.20 from=2 to=91 evalue=1.3e-23 interpro_id=IPR001533 interpro_description=Transcriptional coactivator/pterin dehydratase GO=Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity (GO:0008124))
PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE (db=HMMPanther db_id=PTHR12599 from=1 to=89 evalue=2.5e-23 interpro_id=IPR001533 interpro_description=Transcriptional coactivator/pterin dehydratase GO=Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity (GO:0008124))
AMDSBA1_41_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13537..14706)
-----------------
DNA (1170bp)
protein (390aa)
transglutaminase domain-containing protein
transglutaminase domain-containing protein
Transglutaminase domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTS0_9FIRM (db=UNIREF evalue=1.6e-99 bit_score=368.6 identity=52.6 coverage=88.97435897435896)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA1_41_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14929..15270)
-----------------
DNA (342bp)
protein (114aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSN4_9FIRM (db=UNIREF evalue=1.3e-12 bit_score=78.2 identity=35.8 coverage=91.22807017543859)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSN4_SULAD
AMDSBA1_41_18
unknown

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15307..15636
-----------------
DNA (330bp)
protein (110aa)
seg (db=Seg db_id=seg from=85 to=96)
AMDSBA1_41_19
unknown

Not on your lists

15704..15853
-----------------
DNA (150bp)
protein (50aa)
15704..15853 + ( gc_cont=0.467)
AMDSBA1_41_20
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(16407..16712)
-----------------
DNA (306bp)
protein (102aa)
Peroxiredoxin (EC:1.11.1.15)
Probable peroxiredoxin n=1 Tax=Aquifex aeolicus VF5 RepID=TDXH_AQUAE (db=UNIREF evalue=2.7e-22 bit_score=110.2 identity=52.7 coverage=97.05882352941177)
PEROXIREDOXIN-RELATED (db=HMMPanther db_id=PTHR10681:SF10 from=1 to=89 evalue=4.6e-41)
PEROXIREDOXIN (db=HMMPanther db_id=PTHR10681 from=1 to=89 evalue=4.6e-41)
AMDSBA1_41_21
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16905..17054)
-----------------
DNA (150bp)
protein (50aa)
AhpC2; peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=2 Tax=Sulfobacillus acidophilus RepID=G8U0N2_9FIRM (db=UNIREF evalue=1.6e-12 bit_score=76.6 identity=78.6 coverage=82.0)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=5 to=49 evalue=1.7e-17 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
PEROXIREDOXIN-RELATED (db=HMMPanther db_id=PTHR10681:SF10 from=8 to=49 evalue=4.9e-17)
AMDSBA1_41_22
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17276..17659
-----------------
DNA (384bp)
protein (128aa)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=116 evalue=2.7e-20)
no description (db=Gene3D db_id=G3DSA:3.10.180.10 from=1 to=112 evalue=2.3e-07)
(db=HMMPfam db_id=PF00903 from=5 to=110 evalue=0.00025 interpro_id=IPR004360 interpro_description=Glyoxalase/fosfomycin resistance/dioxygenase)
glyoxalase/bleomycin resistance protein/dioxygenase
AMDSBA1_41_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17688..19517
-----------------
DNA (1830bp)
protein (610aa)
ABC transporter periplasmic protein
Extracellular solute-binding protein family 5 n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZB9_ACIFD (db=UNIREF evalue=2.1e-85 bit_score=322.4 identity=36.3 coverage=87.54098360655738)
seg (db=Seg db_id=seg from=50 to=74)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=62 to=606 evalue=1.1e-75)
AMDSBA1_41_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20156..21613)
-----------------
DNA (1458bp)
protein (486aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CVG0_9BACT (db=UNIREF evalue=7.7e-43 bit_score=180.6 identity=30.1 coverage=94.8559670781893)
transmembrane_regions (db=TMHMM db_id=tmhmm from=167 to=186)
transmembrane_regions (db=TMHMM db_id=tmhmm from=196 to=218)
AMDSBA1_41_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22045..23649
-----------------
DNA (1605bp)
protein (535aa)
amino acid permease
Amino acid transporter n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C7I2_9CREN (db=UNIREF evalue=1.2e-94 bit_score=352.8 identity=36.4 coverage=96.44859813084112)
transmembrane_regions (db=TMHMM db_id=tmhmm from=162 to=184)
transmembrane_regions (db=TMHMM db_id=tmhmm from=199 to=216)
AMDSBA1_41_26
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23854..24276)
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Methanobrevibacter smithii RepID=B9AH00_METSM (db=UNIREF evalue=1.4e-08 bit_score=65.1 identity=31.1 coverage=81.56028368794325)
seg (db=Seg db_id=seg from=5 to=19)
(db=HMMPfam db_id=PF06935 from=21 to=122 evalue=2.9e-25 interpro_id=IPR009702 interpro_description=Protein of unknown function DUF1284)
AMDSBA1_41_27
unknown

Not on your lists

24580..24837
-----------------
DNA (258bp)
protein (86aa)
seg (db=Seg db_id=seg from=52 to=55)
seg (db=Seg db_id=seg from=57 to=68)
AMDSBA1_41_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24875..25822)
-----------------
DNA (948bp)
protein (316aa)
inosine/uridine-preferring nucleoside hydrolase
Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0P1Q5_PHYIT (db=UNIREF evalue=1.7e-22 bit_score=112.5 identity=40.0 coverage=55.379746835443036)
(db=HMMPfam db_id=PF01156 from=4 to=310 evalue=1.2e-90 interpro_id=IPR001910 interpro_description=Inosine/uridine-preferring nucleoside hydrolase domain)
Nucleoside hydrolase (db=superfamily db_id=SSF53590 from=3 to=310 evalue=1.8e-90 interpro_id=IPR001910 interpro_description=Inosine/uridine-preferring nucleoside hydrolase domain)
AMDSBA1_41_29
unknown

Not on your lists

comp(25893..26417)
-----------------
DNA (525bp)
protein (175aa)
25893..26417 - ( gc_cont=0.505)
AMDSBA1_41_30
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

26956..27408
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein possibly involved in aromatic compounds catabolism
Thioesterase family protein n=1 Tax=Corallococcus coralloides DSM 2259 RepID=H8MWT6_CORCM (db=UNIREF evalue=6.6e-09 bit_score=66.2 identity=35.8 coverage=66.22516556291392)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=1 to=144 evalue=5.0e-22)
unchar_dom_1: uncharacterized domain (db=HMMTigr db_id=TIGR00369 from=21 to=141 evalue=1.4e-17 interpro_id=IPR003736 interpro_description=Phenylacetic acid degradation-related protein)
Displaying items 1-30 of 36 in total

View Taxonomy