ggKbase home page

AMDSBA1_42_10

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(8563..8940)

Top 3 Functional Annotations

Value Algorithm Source
ArsR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 102.0
  • Bit_score: 164
  • Evalue 2.30e-38
Transcriptional regulator, ArsR family n=2 Tax=Sulfobacillus acidophilus RepID=F8I2A5_SULAT (db=UNIREF evalue=2.5e-38 bit_score=163.7 identity=75.5 coverage=80.15873015873017) similarity UNIREF
DB: UNIREF
  • Identity: 75.5
  • Coverage: 80.16
  • Bit_score: 163
  • Evalue 2.50e-38
no description (db=HMMSmart db_id=SM00418 from=14 to=93 evalue=3.1e-24 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.10e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 378
ATGGGTCTTGTAGGTCAGAACCGTGACGAACTGCTGGCCGCATTTTGGCAGGCTTTAAGCCATCCCATTCGATTACGAGTCCTGGAATGCCTTCGCGCCGAAGGCAGACTCAATGTTGGCGAACTGGTTGAGCGTCTGGGTATTGGCCAGGGTCACCTTTCGAATCATTTAGCTTGTTTAAAGAATTGCGGTTTGGTCCAAAGTCAGCCGGAGGGACGGTATGTCTATTACCAGATAGGGGATGAGCGAGTGTCGACTTTGCTTGAACTGGGATCGGCTGTACTTCAGGACCATCTTGACGGAGTCGCGTCGTGTTCGATAATCCAGACCCGCTCCAATGCGGACCAGAAACAGTTTTTTTCGGAGCCGAAGATCTAG
PROTEIN sequence
Length: 126
MGLVGQNRDELLAAFWQALSHPIRLRVLECLRAEGRLNVGELVERLGIGQGHLSNHLACLKNCGLVQSQPEGRYVYYQIGDERVSTLLELGSAVLQDHLDGVASCSIIQTRSNADQKQFFSEPKI*