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AMDSBA1_42

Alias: AMDSBA1_C41

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA1_42_1
unknown

Not on your lists

comp(15..275)
-----------------
DNA (261bp)
protein (87aa)
15..275 - ( gc_cont=0.529)
AMDSBA1_42_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1124..1405)
-----------------
DNA (282bp)
protein (94aa)
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJG2_9CHLR (db=UNIREF evalue=1.7e-23 bit_score=114.0 identity=59.1 coverage=89.36170212765957)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=51 to=62 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
no description (db=Gene3D db_id=G3DSA:3.30.70.20 from=2 to=91 evalue=8.1e-21)
AMDSBA1_42_3
unknown

Not on your lists

comp(2255..2458)
-----------------
DNA (204bp)
protein (68aa)
2255..2458 - ( gc_cont=0.466)
AMDSBA1_42_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2968..4224)
-----------------
DNA (1257bp)
protein (419aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=385 to=401)
transmembrane_regions (db=TMHMM db_id=tmhmm from=384 to=401)
transmembrane_regions (db=TMHMM db_id=tmhmm from=363 to=380)
AMDSBA1_42_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4556..4966
-----------------
DNA (411bp)
protein (137aa)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=6 to=108 evalue=7.3e-24)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=112 evalue=2.4e-17 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
no description (db=HMMSmart db_id=SM00418 from=12 to=102 evalue=1.9e-16 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF01022 from=47 to=76 evalue=1.9e-10 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA1_42_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5064..5621)
-----------------
DNA (558bp)
protein (186aa)
gloB; beta-lactamase domain-containing protein
Beta-lactamase domain protein n=1 Tax=Sulfobacillus acidophilus TPY RepID=F8I4F0_SULAT (db=UNIREF evalue=4.5e-60 bit_score=236.5 identity=70.7 coverage=83.87096774193549)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=3 to=179 evalue=2.9e-45)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=1 to=182 evalue=2.6e-44)
AMDSBA1_42_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6364..6603
-----------------
DNA (240bp)
protein (80aa)
(db=HMMPfam db_id=PF10006 from=13 to=77 evalue=1.8e-20 interpro_id=IPR018720 interpro_description=Domain of unknown function DUF2249)
hypothetical protein
AMDSBA1_42_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6979..7317)
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TX83_9FIRM (db=UNIREF evalue=1.4e-08 bit_score=64.7 identity=31.5 coverage=77.87610619469027)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IBR5_SULAT
AMDSBA1_42_9
unknown

Not on your lists

7621..8295
-----------------
DNA (675bp)
protein (225aa)
7621..8295 + ( gc_cont=0.576)
AMDSBA1_42_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8563..8940)
-----------------
DNA (378bp)
protein (126aa)
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family n=2 Tax=Sulfobacillus acidophilus RepID=F8I2A5_SULAT (db=UNIREF evalue=2.5e-38 bit_score=163.7 identity=75.5 coverage=80.15873015873017)
no description (db=HMMSmart db_id=SM00418 from=14 to=93 evalue=3.1e-24 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=8 to=96 evalue=6.4e-24)
AMDSBA1_42_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9135..11375)
-----------------
DNA (2241bp)
protein (747aa)
mercuric reductase (EC:1.16.1.1)
mercuric reductase (EC:1.16.1.1)
Dihydrolipoyl dehydrogenase n=2 Tax=Bacillales RepID=F9DXW3_9BACL (db=UNIREF evalue=1.1e-162 bit_score=579.3 identity=55.3 coverage=72.82463186077644)
AMDSBA1_42_12
unknown

Not on your lists

11450..11692
-----------------
DNA (243bp)
protein (81aa)
11450..11692 + ( gc_cont=0.481)
AMDSBA1_42_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11895..12392
-----------------
DNA (498bp)
protein (166aa)
regulatory protein MarR
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=11 to=148 evalue=1.1e-21)
no description (db=HMMSmart db_id=SM00347 from=35 to=136 evalue=2.7e-14 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=42 to=114 evalue=2.3e-12 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
AMDSBA1_42_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12412..14319
-----------------
DNA (1908bp)
protein (636aa)
major facilitator superfamily protein
Major facilitator superfamily transporter n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=H5S7R0_9NOCA (db=UNIREF evalue=7.5e-163 bit_score=579.7 identity=51.0 coverage=88.52201257861635)
transmembrane_regions (db=TMHMM db_id=tmhmm from=183 to=205)
transmembrane_regions (db=TMHMM db_id=tmhmm from=218 to=240)
AMDSBA1_42_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14371..14787
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U059_9FIRM (db=UNIREF evalue=4.8e-14 bit_score=83.2 identity=35.3 coverage=91.36690647482014)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
AMDSBA1_42_16
unknown

Not on your lists

14784..15026
-----------------
DNA (243bp)
protein (81aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
(db=HMMPfam db_id=PF03779 from=10 to=51 evalue=4.2e-06 interpro_id=IPR005530 interpro_description=SPW repeat)
AMDSBA1_42_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15917..17803
-----------------
DNA (1887bp)
protein (629aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q46B94_METBF (db=UNIREF evalue=1.5e-14 bit_score=87.0 identity=23.2 coverage=63.751987281399046)
transmembrane_regions (db=TMHMM db_id=tmhmm from=251 to=273)
transmembrane_regions (db=TMHMM db_id=tmhmm from=286 to=308)
AMDSBA1_42_18
unknown

Not on your lists

comp(18343..18588)
-----------------
DNA (246bp)
protein (82aa)
seg (db=Seg db_id=seg from=30 to=42)
AMDSBA1_42_19
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19067..19837)
-----------------
DNA (771bp)
protein (257aa)
Putative uncharacterized protein orfL60 n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ31_9FIRM (db=UNIREF evalue=2.0e-37 bit_score=161.8 identity=53.2 coverage=65.36964980544747)
hypothetical protein
seg (db=Seg db_id=seg from=78 to=96)
seg (db=Seg db_id=seg from=47 to=60)
AMDSBA1_42_20
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20109..20552)
-----------------
DNA (444bp)
protein (148aa)
vitamin K epoxide reductase
Vitamin K epoxide reductase n=2 Tax=Sulfobacillus acidophilus RepID=G8U069_9FIRM (db=UNIREF evalue=3.1e-11 bit_score=73.9 identity=33.6 coverage=77.7027027027027)
transmembrane_regions (db=TMHMM db_id=tmhmm from=104 to=126)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=100)
AMDSBA1_42_21
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20583..21497)
-----------------
DNA (915bp)
protein (305aa)
sigma 38 (RpoS)
Group 2 RNA polymerase sigma factor n=1 Tax=Synechococcus phage S-CBS3 RepID=F4YCU2_9CAUD (db=UNIREF evalue=4.0e-29 bit_score=134.4 identity=38.3 coverage=73.77049180327869)
seg (db=Seg db_id=seg from=16 to=30)
SIGMA70_2 (db=PatternScan db_id=PS00716 from=266 to=292 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
AMDSBA1_42_22
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

comp(22349..23437)
-----------------
DNA (1089bp)
protein (363aa)
isocitrate/isopropylmalate dehydrogenase
isocitrate/isopropylmalate dehydrogenase
3-isopropylmalate dehydrogenase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YS95_LYNSP (db=UNIREF evalue=8.1e-122 bit_score=442.6 identity=65.2 coverage=97.2451790633609)
AMDSBA1_42_23
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23715..24263)
-----------------
DNA (549bp)
protein (183aa)
dihydrofolate reductase
Putative uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P210_9FIRM (db=UNIREF evalue=1.7e-22 bit_score=111.7 identity=32.8 coverage=93.98907103825137)
seg (db=Seg db_id=seg from=133 to=147)
no description (db=Gene3D db_id=G3DSA:3.40.430.10 from=5 to=182 evalue=2.8e-39 interpro_id=IPR024072 interpro_description=Dihydrofolate reductase-like domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA1_42_24
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24367..24870)
-----------------
DNA (504bp)
protein (168aa)
acetyltransferase domain protein
Acetyltransferase, GNAT family n=14 Tax=Bacillus cereus group RepID=B3YQX1_BACCE (db=UNIREF evalue=7.8e-19 bit_score=99.4 identity=34.4 coverage=88.09523809523809)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=151 evalue=5.6e-26 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=163 evalue=2.8e-17 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA1_42_25
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25638..26618
-----------------
DNA (981bp)
protein (327aa)
protein YajO
protein YajO
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Bacillus subtilis subsp. spizizenii RepID=D5N5M8_BACPN (db=UNIREF evalue=4.6e-140 bit_score=503.1 identity=73.0 coverage=99.38837920489296)
AMDSBA1_42_26
unknown

Not on your lists

26587..26721
-----------------
DNA (135bp)
protein (45aa)
26587..26721 + ( gc_cont=0.474)
AMDSBA1_42_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27010..27276)
-----------------
DNA (267bp)
protein (89aa)
seg (db=Seg db_id=seg from=11 to=21)
tatAE: twin arginine-targeting protein trans (db=HMMTigr db_id=TIGR01411 from=5 to=51 evalue=2.8e-18 interpro_id=IPR006312 interpro_description=Twin-arginine translocation protein TatA/E GO=Cellular Component: plasma membrane (GO:0005886), Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein secretion (GO:0009306), Biological Process: protein transport (GO:0015031), Cellular Component: integral to membrane (GO:0016021))
(db=HMMPfam db_id=PF02416 from=6 to=56 evalue=2.4e-17 interpro_id=IPR003369 interpro_description=Twin-arginine translocation protein TatA/B/E GO=Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein transport (GO:0015031))
Sec-independent protein translocase protein tatA/E-like protein
AMDSBA1_42_28
unknown

Not on your lists

comp(27301..27924)
-----------------
DNA (624bp)
protein (208aa)
TorD-like (db=superfamily db_id=SSF89155 from=6 to=207 evalue=2.5e-18)
(db=HMMPfam db_id=PF02613 from=45 to=170 evalue=1.3e-10 interpro_id=IPR020945 interpro_description=DMSO/Nitrate reductase chaperone)
AMDSBA1_42_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28883..29977)
-----------------
DNA (1095bp)
protein (365aa)
tartrate dehydrogenase (EC:4.1.1.73)
tartrate dehydrogenase (EC:4.1.1.73)
Probable tartrate dehydrogenase/decarboxylase n=10 Tax=Bacillus RepID=TTUC_BACSU (db=UNIREF evalue=3.9e-108 bit_score=397.1 identity=53.2 coverage=96.16438356164385)
AMDSBA1_42_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30461..31360)
-----------------
DNA (900bp)
protein (300aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVS7_9FIRM (db=UNIREF evalue=4.6e-86 bit_score=323.6 identity=57.5 coverage=92.33333333333333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
Displaying items 1-30 of 31 in total

View Taxonomy