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AMDSBA1_42_21

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(20583..21497)

Top 3 Functional Annotations

Value Algorithm Source
sigma 38 (RpoS) similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 296.0
  • Bit_score: 268
  • Evalue 2.80e-69
Group 2 RNA polymerase sigma factor n=1 Tax=Synechococcus phage S-CBS3 RepID=F4YCU2_9CAUD (db=UNIREF evalue=4.0e-29 bit_score=134.4 identity=38.3 coverage=73.77049180327869) similarity UNIREF
DB: UNIREF
  • Identity: 38.3
  • Coverage: 73.77
  • Bit_score: 134
  • Evalue 4.00e-29
seg (db=Seg db_id=seg from=16 to=30) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Syntrophomonas wolfei → Syntrophomonas → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 915
ATGTCCCGTCATAACCGCTCTCGATCTCCCTCTTTAGCGGCCATGTCCGAAGAGAGCGCAGGTTCCGTCTCGCCTTCATCTGCTGCCGTAACCGAGGATGCAGATGCGCTGCAGCAATATTTTCGGGATATGGCACAGTTTCCGCTCCTCGATCATGCTACCATGGTAGCTTTGGCAAAGCTCTGGGAACAAGGTGACCATGGTGCCAAAAACACTTTGGTTGAAGGCAACCTGCGACTGGTCGTGTCCATTGCCAAGCGCTATGTAAACCGGGGCGTGCCGCTCTTGGATCTCATTCAGGAAGGCAACGCAGGTCTCATGCGGGCCGTCGAGAAATTTGATTATCGTTCCGGATACCGATTTAGTACCTATGCTACTTGGTGGATCCGTCAAGCTGTTGCCCGGGCTGTGGCGGATCACGGACGCACAATCCGCCTTCCGGTGCACATGCATGAAAAGGTGTCAAGGCTCCACCGTGTCGTGTATACGCTGCAGCAGCAGCATGATACGGCAACGCCGGCGATGGTGGCGGAATCACTGAACGTGTCTGTCGACGAAGTTATTCACATGATGCAGTATGATCAGCCGGCTTTGTCTTTGGATATGCCAATGCAAGAAGAACAAGACACGCTTTTGGCCGACTTTGTCGCTGACCCGCAAGCCGTGCCGCCCGAAGACTATGCCACCGACCAATGGCTTCACAGTCGTTTGGATTCGGCCTTTAAGCACTTGTCGTCGCAACAGAAACGCGTCCTTCACCTTCGATTCGGTTGGGATGATGACGGTCATGCCCGAACACTCGAGGAAACCGGCCAGATTTTGGGGTTAAGCCGGGAACGCATTCGGCAAATTGAGCAAGCCGCTTTGTGTAAGCTGCGGAACACGCCGGATATGGATGCATTGCGGGAACATTGA
PROTEIN sequence
Length: 305
MSRHNRSRSPSLAAMSEESAGSVSPSSAAVTEDADALQQYFRDMAQFPLLDHATMVALAKLWEQGDHGAKNTLVEGNLRLVVSIAKRYVNRGVPLLDLIQEGNAGLMRAVEKFDYRSGYRFSTYATWWIRQAVARAVADHGRTIRLPVHMHEKVSRLHRVVYTLQQQHDTATPAMVAESLNVSVDEVIHMMQYDQPALSLDMPMQEEQDTLLADFVADPQAVPPEDYATDQWLHSRLDSAFKHLSSQQKRVLHLRFGWDDDGHARTLEETGQILGLSRERIRQIEQAALCKLRNTPDMDALREH*