ggKbase home page

AMDSBA1_47_27

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 27062..27415

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=26 to=100 evalue=5.7e-07) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.70e-07
(db=HMMPfam db_id=PF09339 from=28 to=72 evalue=7.0e-07 interpro_id=IPR005471 interpro_description=Transcription regulator IclR, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.00e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 354
TTGAGCACCATTCCCAAAGGTAATACTGCTCTGGTTGTCGGAAGAGGAGCAATGACTTTGTCAAACTCGTGGGCCATACCAAGCCTCTCTCGGGGATTAACGTTCCTGGATCTTCTGGGGGAACATCCTACAGGCGGTACAGTGTTGTGGCTCAGTGCCGTCTCGGGGATTCCCTTGGGCACGGTTTACCATTTGATTAACACACGGATGGAGGCCCCATATGTGATCAAGGATCCGCCAGCCCCGGCTGACACTTTGTCCTATCAAATAGCCCACCTCAACAATCCACTGCAGTCCCGCCAGATTCTTCCCGACACGGCTATCCGCACGCGAACTCATGGAGGGACTCCATGA
PROTEIN sequence
Length: 118
LSTIPKGNTALVVGRGAMTLSNSWAIPSLSRGLTFLDLLGEHPTGGTVLWLSAVSGIPLGTVYHLINTRMEAPYVIKDPPAPADTLSYQIAHLNNPLQSRQILPDTAIRTRTHGGTP*