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AMDSBA1_58_1

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(1..120)

Top 3 Functional Annotations

Value Algorithm Source
COLD SHOCK DOMAIN CONTAINING PROTEINS (db=HMMPanther db_id=PTHR11544 from=20 to=40 evalue=2.1e-08) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.10e-08
(db=HMMPfam db_id=PF00313 from=20 to=40 evalue=4.4e-07 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.40e-07
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=12 to=40 evalue=2.3e-06 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.30e-06

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Taxonomy

Sequences

DNA sequence
Length: 120
TTGAACGCGGTTGTCCTGGATGTTAGGACAGCTTTAAGAAAGGGGACATATTTTAGCATGACCGGACGTGTCAAATGGTTTAGTGCAGAAAAAGGGTACGGATTCTTAGAGCGTGAAGAC
PROTEIN sequence
Length: 40
LNAVVLDVRTALRKGTYFSMTGRVKWFSAEKGYGFLERED