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AMDSBA1_59_31

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(31404..32144)

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=181 to=195) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
pilus_cpaB: Flp pilus assembly protein Cpa (db=HMMTigr db_id=TIGR03177 from=15 to=244 evalue=1.9e-18 interpro_id=IPR017592 interpro_description=Pilus assembly, Flp-type CpaB) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.90e-18

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 741
ATGGCGATTGCCAAAAGGATGGGCTCATTCTTCCGCATTAACCGCTGGCTTTTGGCCGGCATCATCGTGATGGGCCTGGCTGCCTATGCCTCGGCCCGCTACGTCCAGATCGCCATTCAGCGAGCCGACGCCAAAACCCGGGTGCCGACTGTTCAGGTCTTGGTCGCCTCTCAGGCGATTGCGGCCTATGAGCCTGTGACACCGTCGATGTTCACGCCCAAGACCTATCCCGCATCGGCCGTTCCGCCCGGGGCCTATTCCTCTCCCCAGAGTCTCTCGGGAGCATGGAGTACGGAAGCCGTTTCCCCGGGGATGCCGATTGTTCCCAGTGAGGTGTTTTTTCCTAAAACGGCTAATGTTTTGGCAGCGCGGATAAGTCCTGGGGACATGGCGGTCGACATTCCTTTGTCTTCCACTAATGCGATTGACGGGTTGATTATGCCCGGAGACAACGTGGCCTTATTTATCACGATTACGCCTAAGAGCGGACCAAAGGAAATCGAAGATTTCATGAATCACGTCAAAGTTTTGGCTGTCAACGGTTCCATGAGCCCTCCTTCAAGCCCTGGTGTCGGGCAGAGCCCGAATCTTATTGTGGCCATGACACCGTCCAGAATTGAGCGGCTTCTGTTTGCCGAACAGAATTCGTCGGGTTTCACCGCCGCCTTGGAATCTCCGCATTCGAAGGCAACGAGGCCAACTCCCTACGGATTAACCAAGCTTGACACACCGATTCCATAA
PROTEIN sequence
Length: 247
MAIAKRMGSFFRINRWLLAGIIVMGLAAYASARYVQIAIQRADAKTRVPTVQVLVASQAIAAYEPVTPSMFTPKTYPASAVPPGAYSSPQSLSGAWSTEAVSPGMPIVPSEVFFPKTANVLAARISPGDMAVDIPLSSTNAIDGLIMPGDNVALFITITPKSGPKEIEDFMNHVKVLAVNGSMSPPSSPGVGQSPNLIVAMTPSRIERLLFAEQNSSGFTAALESPHSKATRPTPYGLTKLDTPIP*