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AMDSBA1_59

Alias: AMDSBA1_C58

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_59_1
unknown

Not on your lists

2..103
DNA (102bp) protein (34aa)
2..103 + ( gc_cont=0.520)
AMDSBA1_59_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(155..1579)
DNA (1425bp) protein (475aa)
sensor histidine kinase
Sensor histidine kinase n=3 Tax=Sulfobacillus acidophilus RepID=A1Z6C7_9FIRM (db=UNIREF evalue=3.0e-132 bit_score=477.6 identity=52.1 coverage=97.47368421052632)
seg (db=Seg db_id=seg from=14 to=25)
AMDSBA1_59_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1606..2325)
DNA (720bp) protein (240aa)
winged helix family two component transcriptional regulator
Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WP26_9SYNE (db=UNIREF evalue=3.2e-34 bit_score=151.0 identity=34.7 coverage=92.08333333333333)
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) (db=HMMPanther db_id=PTHR23283:SF21 from=7 to=126 evalue=3.9e-37)
no description (db=HMMSmart db_id=SM00448 from=9 to=120 evalue=9.0e-46 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA1_59_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2326..4677)
DNA (2352bp) protein (784aa)
rho; transcription termination factor Rho
rho; transcription termination factor Rho
Transcription termination factor Rho n=6 Tax=Campylobacter RepID=B9D4Q2_WOLRE (db=UNIREF evalue=1.9e-128 bit_score=465.7 identity=52.6 coverage=56.505102040816325)
seg (db=Seg db_id=seg from=142 to=150)
AMDSBA1_59_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4715..5671)
DNA (957bp) protein (319aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11)
fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ58_9FIRM (db=UNIREF evalue=9.0e-125 bit_score=452.2 identity=71.1 coverage=99.37304075235109)
AMDSBA1_59_6
unknown

Not on your lists

6046..6396
DNA (351bp) protein (117aa)
6046..6396 + ( gc_cont=0.547)
AMDSBA1_59_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6262..6615)
DNA (354bp) protein (118aa)
seg (db=Seg db_id=seg from=10 to=24)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=115 evalue=2.8e-17 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=1 to=117 evalue=4.7e-13)
(db=HMMPfam db_id=PF00072 from=3 to=87 evalue=1.3e-09 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA1_59_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6806..8017
DNA (1212bp) protein (404aa)
HtrA2 peptidase (EC:3.4.21.108)
HtrA2 peptidase n=1 Tax=Fischerella sp. JSC-11 RepID=G6FT61_9CYAN (db=UNIREF evalue=4.3e-47 bit_score=194.5 identity=38.1 coverage=72.27722772277228)
seg (db=Seg db_id=seg from=84 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA1_59_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8069..8518)
DNA (450bp) protein (150aa)
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ61_9FIRM (db=UNIREF evalue=2.2e-57 bit_score=227.3 identity=71.8 coverage=98.66666666666667)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=149 evalue=4.4e-24 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=56 to=149 evalue=3.4e-19 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA1_59_10
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

8686..10107
DNA (1422bp) protein (474aa)
amino acid permease-associated protein
amino acid permease-associated protein
Amino acid transporter n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1D6_9CREN (db=UNIREF evalue=3.2e-86 bit_score=324.7 identity=40.4 coverage=92.82700421940928)
transmembrane_regions (db=TMHMM db_id=tmhmm from=160 to=182)
AMDSBA1_59_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10164..11561)
DNA (1398bp) protein (466aa)
cytosine/purines uracil thiamine allantoin permease
cytosine/purines uracil thiamine allantoin permease
Permease n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMQ8_9ACTO (db=UNIREF evalue=4.5e-24 bit_score=118.2 identity=25.4 coverage=91.84549356223177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=316)
AMDSBA1_59_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11879..13276
DNA (1398bp) protein (466aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ64_9FIRM (db=UNIREF evalue=2.7e-194 bit_score=683.7 identity=70.7 coverage=98.49785407725322)
AMDSBA1_59_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13633..15120
DNA (1488bp) protein (496aa)
Conjugation protein, trag/trad family n=2 Tax=Sulfobacillus acidophilus RepID=F8I972_SULAT (db=UNIREF evalue=9.1e-108 bit_score=396.4 identity=49.4 coverage=77.82258064516128)
hypothetical protein
hypothetical protein
AMDSBA1_59_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15117..15869
DNA (753bp) protein (251aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ71_9FIRM (db=UNIREF evalue=2.2e-25 bit_score=121.7 identity=34.1 coverage=84.86055776892431)
seg (db=Seg db_id=seg from=58 to=70)
Uncharacterized protein {ECO:0000313|EMBL:AEJ38955.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA1_59_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16155..16823
DNA (669bp) protein (223aa)
minC; septum site-determining protein MinC
Probable septum site-determining protein MinC n=3 Tax=Cyanothece RepID=G6GS68_9CHRO (db=UNIREF evalue=1.8e-15 bit_score=88.6 identity=37.8 coverage=51.569506726457405)
Cell-division inhibitor MinC, C-terminal domain (db=superfamily db_id=SSF63848 from=94 to=200 evalue=9.9e-30 interpro_id=IPR005526 interpro_description=Septum formation inhibitor MinC, C-terminal GO=Biological Process: cell morphogenesis (GO:0000902))
no description (db=Gene3D db_id=G3DSA:2.160.20.70 from=95 to=204 evalue=1.8e-26 interpro_id=IPR016098 interpro_description=Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO=Biological Process: cell morphogenesis (GO:0000902))
AMDSBA1_59_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18055..18348
DNA (294bp) protein (98aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ73_9FIRM (db=UNIREF evalue=1.2e-24 bit_score=117.9 identity=61.7 coverage=94.89795918367348)
(db=HMMPfam db_id=PF09876 from=3 to=82 evalue=7.9e-08 interpro_id=IPR018664 interpro_description=Protein of unknown function DUF2103, metal-binding)
Uncharacterized protein {ECO:0000313|EMBL:AEJ38953.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA1_59_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18638..19081)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSE5_9CLOT (db=UNIREF evalue=1.2e-07 bit_score=62.0 identity=27.8 coverage=87.83783783783784)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=137)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
AMDSBA1_59_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19081..19872)
DNA (792bp) protein (264aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ75_9FIRM (db=UNIREF evalue=8.7e-73 bit_score=279.3 identity=56.4 coverage=96.5909090909091)
seg (db=Seg db_id=seg from=177 to=191)
transmembrane_regions (db=TMHMM db_id=tmhmm from=234 to=256)
AMDSBA1_59_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20281..21030)
DNA (750bp) protein (250aa)
family 2 glycosyl transferase
Glycosyltransferase, group 2 family n=1 Tax=Prevotella bryantii B14 RepID=D8DUT7_PREBR (db=UNIREF evalue=1.1e-53 bit_score=215.7 identity=45.7 coverage=92.80000000000001)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=9 to=228 evalue=1.3e-46)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=215 evalue=1.2e-43)
AMDSBA1_59_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21050..22210)
DNA (1161bp) protein (387aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ78_9FIRM (db=UNIREF evalue=2.1e-128 bit_score=464.5 identity=54.8 coverage=98.70801033591732)
AMDSBA1_59_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22207..23088)
DNA (882bp) protein (294aa)
GCN5-related N-acetyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ79_9FIRM (db=UNIREF evalue=1.4e-58 bit_score=232.3 identity=45.4 coverage=93.87755102040816)
N-acetyltransferase GCN5
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=134 evalue=4.8e-06 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I963_SULAT
AMDSBA1_59_22
unknown

Not on your lists

23736..23942
DNA (207bp) protein (69aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
AMDSBA1_59_23
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(24031..24381)
DNA (351bp) protein (117aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
seg (db=Seg db_id=seg from=71 to=89)
(db=HMMPfam db_id=PF04134 from=9 to=111 evalue=4.2e-19 interpro_id=IPR007263 interpro_description=Putative thiol-disulphide oxidoreductase DCC)
Putative uncharacterized protein {ECO:0000313|EMBL:ABS00946.1}; TaxID=271 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus aquaticus.;"
AMDSBA1_59_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24700..25881)
DNA (1182bp) protein (394aa)
Cobyrinic acid ac-diamide synthase n=2 Tax=Sulfobacillus acidophilus RepID=G8TS04_9FIRM (db=UNIREF evalue=1.9e-148 bit_score=531.2 identity=69.6 coverage=95.68527918781726)
Cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase
seg (db=Seg db_id=seg from=83 to=95)
AMDSBA1_59_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26080..26577
DNA (498bp) protein (166aa)
seg (db=Seg db_id=seg from=16 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=92 to=112)
seg (db=Seg db_id=seg from=143 to=156)
AMDSBA1_59_26
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26580..26927)
DNA (348bp) protein (116aa)
hypothetical protein
(db=HMMPfam db_id=PF02643 from=14 to=109 evalue=6.9e-21 interpro_id=IPR003795 interpro_description=Protein of unknown function DUF192)
Uncharacterized protein {ECO:0000313|EMBL:KGP75167.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.
Uncharacterized protein n=2 Tax=Erysipelothrix rhusiopathiae RepID=F5WT07_ERYRF
AMDSBA1_59_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26972..27916)
DNA (945bp) protein (315aa)
type II secretion system F domain-containing protein rbh
Type II secretion system protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPR9_9FIRM (db=UNIREF evalue=3.2e-34 bit_score=151.4 identity=34.3 coverage=91.42857142857143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=157)
seg (db=Seg db_id=seg from=220 to=232)
AMDSBA1_59_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27933..28850)
DNA (918bp) protein (306aa)
type II secretion system F domain-containing protein
Type II secretion system F domain-containing protein n=2 Tax=Stenotrophomonas maltophilia RepID=G0JZU8_STEMA (db=UNIREF evalue=3.6e-22 bit_score=111.3 identity=33.5 coverage=67.3202614379085)
seg (db=Seg db_id=seg from=91 to=116)
transmembrane_regions (db=TMHMM db_id=tmhmm from=274 to=296)
AMDSBA1_59_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28858..30210)
DNA (1353bp) protein (451aa)
type II secretion system protein E
type II secretion system protein E
Pilus assembly protein CpaF n=3 Tax=Erythrobacter RepID=A3W9Q4_9SPHN (db=UNIREF evalue=2.8e-111 bit_score=407.9 identity=46.6 coverage=94.90022172949001)
AMDSBA1_59_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30242..31381)
DNA (1140bp) protein (380aa)
Cobyrinic acid ac-diamide synthase
seg (db=Seg db_id=seg from=208 to=219)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=124 to=372 evalue=4.6e-37)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=124 to=362 evalue=9.5e-31)
Displaying items 1-30 of 33 in total

View Taxonomy