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AMDSBA1_59_4 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rho; transcription termination factor Rho rbh KEGG
DB: KEGG
62.3 719.0 777 4.80e-222 say:TPY_0774
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
62.3 719.0 777 4.80e-222 say:TPY_0774
Transcription termination factor Rho n=6 Tax=Campylobacter RepID=B9D4Q2_WOLRE (db=UNIREF evalue=1.9e-128 bit_score=465.7 identity=52.6 coverage=56.505102040816325) similarity UNIREF
DB: UNIREF
52.6 56.51 465 1.90e-128 say:TPY_0774
seg (db=Seg db_id=seg from=142 to=150) iprscan interpro
DB: Seg
null null null null say:TPY_0774
seg (db=Seg db_id=seg from=75 to=82) iprscan interpro
DB: Seg
null null null null say:TPY_0774
seg (db=Seg db_id=seg from=316 to=331) iprscan interpro
DB: Seg
null null null null say:TPY_0774
seg (db=Seg db_id=seg from=151 to=166) iprscan interpro
DB: Seg
null null null null say:TPY_0774
rbh rbh UNIREF
DB: UNIREF
null null null null say:TPY_0774
seg (db=Seg db_id=seg from=15 to=71) iprscan interpro
DB: Seg
null null null null say:TPY_0774
rho: transcription termination factor Rho (db=HMMTigr db_id=TIGR00767 from=366 to=777 evalue=3.7e-202 interpro_id=IPR004665 interpro_description=Transcription termination factor Rho GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ATP binding (GO:0005524), Biological Process: transcription termination, DNA-dependent (GO:0006353), Molecular Function: RNA-dependent ATPase activity (GO:0008186)) iprscan interpro
DB: HMMTigr
null null null 3.70e-202 say:TPY_0774
ATP SYNTHASE (db=HMMPanther db_id=PTHR15184 from=378 to=755 evalue=1.4e-190) iprscan interpro
DB: HMMPanther
null null null 1.40e-190 say:TPY_0774
TRANSCRIPTION TERMINATION FACTOR RHO (db=HMMPanther db_id=PTHR15184:SF2 from=378 to=755 evalue=1.4e-190) iprscan interpro
DB: HMMPanther
null null null 1.40e-190 say:TPY_0774
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=491 to=778 evalue=6.0e-93) iprscan interpro
DB: Gene3D
null null null 6.00e-93 say:TPY_0774
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=451 to=731 evalue=7.7e-76) iprscan interpro
DB: superfamily
null null null 7.70e-76 say:TPY_0774
(db=HMMPfam db_id=PF00006 from=519 to=723 evalue=1.4e-41 interpro_id=IPR000194 interpro_description=ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO=Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMPfam
null null null 1.40e-41 say:TPY_0774
(db=HMMPfam db_id=PF07497 from=414 to=488 evalue=2.1e-27 interpro_id=IPR011113 interpro_description=Rho termination factor, RNA-binding GO=Molecular Function: RNA binding (GO:0003723), Biological Process: transcription termination, DNA-dependent (GO:0006353)) iprscan interpro
DB: HMMPfam
null null null 2.10e-27 say:TPY_0774
no description (db=HMMSmart db_id=SM00357 from=417 to=480 evalue=3.3e-11 interpro_id=IPR011129 interpro_description=Cold shock protein GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMSmart
null null null 3.30e-11 say:TPY_0774
(db=HMMPfam db_id=PF07498 from=370 to=412 evalue=2.3e-10 interpro_id=IPR011112 interpro_description=Rho termination factor, N-terminal GO=Biological Process: transcription termination, DNA-dependent (GO:0006353)) iprscan interpro
DB: HMMPfam
null null null 2.30e-10 say:TPY_0774
Rho termination factor, N-terminal domain (db=superfamily db_id=SSF68912 from=366 to=412 evalue=1.2e-09 interpro_id=IPR011112 interpro_description=Rho termination factor, N-terminal GO=Biological Process: transcription termination, DNA-dependent (GO:0006353)) iprscan interpro
DB: superfamily
null null null 1.20e-09 say:TPY_0774
no description (db=HMMSmart db_id=SM00382 from=529 to=714 evalue=2.4e-09 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111)) iprscan interpro
DB: HMMSmart
null null null 2.40e-09 say:TPY_0774
Rho (db=HAMAP db_id=MF_01884 from=366 to=778 evalue=207.748 interpro_id=IPR004665 interpro_description=Transcription termination factor Rho GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ATP binding (GO:0005524), Biological Process: transcription termination, DNA-dependent (GO:0006353), Molecular Function: RNA-dependent ATPase activity (GO:0008186)) iprscan interpro
DB: HAMAP
null null null 2.08e+02 say:TPY_0774
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1051632 speci UNIPROT
DB: UniProtKB
62.3 719.0 777 2.40e-221 F8I985_SULAT