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AMDSBA1_80_13

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(13652..14059)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 130.0
  • Bit_score: 119
  • Evalue 7.20e-25
Conjugal transfer protein TrbB n=8 Tax=Agrobacterium RepID=TRBB_RHIRD (db=UNIREF evalue=2.0e-09 bit_score=67.8 identity=37.8 coverage=66.17647058823529) similarity UNIREF
DB: UNIREF
  • Identity: 37.8
  • Coverage: 66.18
  • Bit_score: 67
  • Evalue 2.00e-09
(db=HMMPfam db_id=PF00437 from=4 to=94 evalue=1.2e-25 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-25

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 408
CACCGGAATTATTCGATTCATGACTTGGTAATTAATGCTCTGCGTATGCGTCCGGATCGGATCATTGTCGGCGAGGTGCGGGGAGAGGAGGCCATGGAACTCATCGAGGCCATGTCCACCGGGCATCCGGGCAGTTTGTCAACGGTCCATAGTCAGTCGGGAGGTGTAGCCACGATTTTCCGACTGGCCCGGATGTGTTCCCGTCGCCAATTAGGAATTCCTTTTGACCAGCTCGTGCAGCAAATCCAAGAAACCTTGGACATCATTATCTATGTTCGCCGTTATCCCGATGGCATTCGGCGGATCGAATCGATCCAGCAGCCGCTGCAGAACAACATGAATGTGATTTGGCAATATCAGGCGGGGAACACACCGGTATTTCTCAAAATAGGACAATTCTATGCATAG
PROTEIN sequence
Length: 136
HRNYSIHDLVINALRMRPDRIIVGEVRGEEAMELIEAMSTGHPGSLSTVHSQSGGVATIFRLARMCSRRQLGIPFDQLVQQIQETLDIIIYVRRYPDGIRRIESIQQPLQNNMNVIWQYQAGNTPVFLKIGQFYA*