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AMDSBA1_80

Alias: AMDSBA1_C79

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_80_1
unknown

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1..288
DNA (288bp) protein (96aa)
1..288 + ( gc_cont=0.590)
AMDSBA1_80_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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874..1494
DNA (621bp) protein (207aa)
hypothetical protein
Sulfurtransferase n=3 Tax=Streptomyces RepID=Q9RD61_STRCO (db=UNIREF evalue=7.6e-08 bit_score=63.2 identity=30.8 coverage=49.75845410628019)
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=107 to=205 evalue=5.7e-29 interpro_id=IPR001763 interpro_description=Rhodanese-like)
no description (db=Gene3D db_id=G3DSA:3.40.250.10 from=105 to=203 evalue=3.1e-22 interpro_id=IPR001763 interpro_description=Rhodanese-like)
AMDSBA1_80_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1630..2211)
DNA (582bp) protein (194aa)
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=1 Tax=Dechloromonas aromatica RCB RepID=ATKC_DECAR (db=UNIREF evalue=9.3e-32 bit_score=142.5 identity=41.2 coverage=93.29896907216495)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=8 to=21)
AMDSBA1_80_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2245..4257)
DNA (2013bp) protein (671aa)
potassium-transporting ATPase subunit B (EC:3.6.3.4)
potassium-transporting ATPase subunit B (EC:3.6.3.4)
Potassium-transporting ATPase B chain n=2 Tax=Sulfobacillus acidophilus RepID=G8TY77_9FIRM (db=UNIREF evalue=4.3e-278 bit_score=962.6 identity=74.9 coverage=98.36065573770492)
transmembrane_regions (db=TMHMM db_id=tmhmm from=641 to=660)
AMDSBA1_80_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4296..5990)
DNA (1695bp) protein (565aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12) rbh
Potassium-transporting ATPase A chain 2 n=6 Tax=Acidiphilium RepID=A5FU08_ACICJ (db=UNIREF evalue=4.6e-124 bit_score=450.7 identity=45.3 coverage=95.929203539823)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=459 to=478)
AMDSBA1_80_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6470..7840
DNA (1371bp) protein (457aa)
putative signal transduction histidine kinase
Sensory transduction histidine kinase n=23 Tax=Streptococcus RepID=D0RXR2_9STRE (db=UNIREF evalue=7.8e-13 bit_score=80.9 identity=30.1 coverage=43.10722100656455)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
AMDSBA1_80_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7888..8556
DNA (669bp) protein (223aa)
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family n=2 Tax=Sulfobacillus acidophilus RepID=G8TYA3_9FIRM (db=UNIREF evalue=5.1e-74 bit_score=283.1 identity=65.6 coverage=93.27354260089686)
seg (db=Seg db_id=seg from=52 to=61)
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=168 to=195 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA1_80_8
unknown

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8639..8803
DNA (165bp) protein (55aa)
8639..8803 + ( gc_cont=0.515)
AMDSBA1_80_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8796..10082
DNA (1287bp) protein (429aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
Cystathionine gamma-synthase n=1 Tax=Listeria grayi DSM 20601 RepID=D7V0J3_LISGR (db=UNIREF evalue=4.4e-34 bit_score=151.4 identity=37.9 coverage=50.349650349650354)
OAH_OAS_sulfhy: O-acetylhomoserine ami (db=HMMTigr db_id=TIGR01326 from=7 to=423 evalue=1.3e-234 interpro_id=IPR006235 interpro_description=O-acetylhomoserine/O-acetylserine sulfhydrylase GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
O-ACETYLHOMOSERINE (THIOL)-LYASE (db=HMMPanther db_id=PTHR11808:SF12 from=95 to=425 evalue=2.1e-149 interpro_id=IPR006235 interpro_description=O-acetylhomoserine/O-acetylserine sulfhydrylase GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
AMDSBA1_80_10
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10206..11213)
DNA (1008bp) protein (336aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Desulfosporosinus acidiphilus SJ4 RepID=I4D0L1_9FIRM (db=UNIREF evalue=1.5e-08 bit_score=66.2 identity=24.3 coverage=79.46428571428571)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=118 to=295 evalue=1.3e-22)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=108 to=295 evalue=3.8e-14)
(db=HMMPfam db_id=PF00891 from=139 to=237 evalue=9.0e-14 interpro_id=IPR001077 interpro_description=O-methyltransferase, family 2 GO=Molecular Function: O-methyltransferase activity (GO:0008171))
AMDSBA1_80_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12287..12955)
DNA (669bp) protein (223aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXA5_9FIRM (db=UNIREF evalue=5.9e-14 bit_score=83.6 identity=33.3 coverage=76.23318385650224)
seg (db=Seg db_id=seg from=47 to=60)
seg (db=Seg db_id=seg from=188 to=203)
AMDSBA1_80_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12952..13659)
DNA (708bp) protein (236aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=172 to=194)
transmembrane_regions (db=TMHMM db_id=tmhmm from=204 to=226)
AMDSBA1_80_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13652..14059)
DNA (408bp) protein (136aa)
type II secretion system protein E
Conjugal transfer protein TrbB n=8 Tax=Agrobacterium RepID=TRBB_RHIRD (db=UNIREF evalue=2.0e-09 bit_score=67.8 identity=37.8 coverage=66.17647058823529)
(db=HMMPfam db_id=PF00437 from=4 to=94 evalue=1.2e-25 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=96 evalue=1.1e-18)
Displaying 13 items

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