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AMDSBA3_6

Alias: AMDSBA3_C5

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Displaying items 31-60 of 96 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_6_31
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32991..33419
DNA (429bp) protein (143aa)
coiled-coil (db=Coil db_id=coil from=6 to=34 evalue=NA)
seg (db=Seg db_id=seg from=91 to=127)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ40557.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA3_6_32
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33410..34033
DNA (624bp) protein (208aa)
type IV pilus assembly PilZ
Type IV pilus assembly PilZ n=2 Tax=Sulfobacillus acidophilus RepID=G8U1J3_9FIRM (db=UNIREF evalue=3.3e-75 bit_score=287.0 identity=66.7 coverage=97.59615384615384)
(db=HMMPfam db_id=PF07238 from=91 to=195 evalue=1.4e-12 interpro_id=IPR009875 interpro_description=PilZ domain GO=Molecular Function: cyclic-di-GMP binding (GO:0035438))
Uncharacterized protein {ECO:0000313|EMBL:AEW06598.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
AMDSBA3_6_33
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34089..35534
DNA (1446bp) protein (482aa)
hypothetical protein (db=KEGG evalue=2.0e-11 bit_score=75.9 identity=24.1 coverage=62.448132780082986)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U1J2_9FIRM (db=UNIREF evalue=2.7e-11 bit_score=75.9 identity=24.1 coverage=62.448132780082986)
seg (db=Seg db_id=seg from=432 to=441)
seg (db=Seg db_id=seg from=461 to=477)
AMDSBA3_6_34
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35559..36080
DNA (522bp) protein (174aa)
Flagellar hook capping protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U1J1_9FIRM (db=UNIREF evalue=8.0e-43 bit_score=179.1 identity=66.0 coverage=79.88505747126436)
flgD; flagellar basal body rod modification protein
seg (db=Seg db_id=seg from=115 to=137)
seg (db=Seg db_id=seg from=14 to=37)
AMDSBA3_6_35
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36077..36553
DNA (477bp) protein (159aa)
36077..36553 + ( gc_cont=0.589)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U1J0_SULAD
Putative flagellar hook associated protein {ECO:0000313|EMBL:AEJ40553.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacill
AMDSBA3_6_36
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36546..37820
DNA (1275bp) protein (425aa)
seg (db=Seg db_id=seg from=343 to=352)
seg (db=Seg db_id=seg from=234 to=248)
seg (db=Seg db_id=seg from=210 to=224)
seg (db=Seg db_id=seg from=68 to=83)
AMDSBA3_6_37
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37882..39621)
DNA (1740bp) protein (580aa)
family 5 extracellular solute-binding protein
ABC-type transporter, periplasmic subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8U1I7_9FIRM (db=UNIREF evalue=2.7e-196 bit_score=690.6 identity=58.2 coverage=97.24137931034483)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=33 to=579 evalue=1.3e-78)
AMDSBA3_6_38
unknown

Not on your lists

comp(39871..40353)
DNA (483bp) protein (161aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
AMDSBA3_6_39
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40657..41547
DNA (891bp) protein (297aa)
binding-protein-dependent transport system inner membrane protein rbh
Peptide/nickel/opine uptake family ABC transporter, permease protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U463_9RHOB (db=UNIREF evalue=2.6e-57 bit_score=228.0 identity=43.1 coverage=98.98989898989899)
transmembrane_regions (db=TMHMM db_id=tmhmm from=262 to=284)
transmembrane_regions (db=TMHMM db_id=tmhmm from=210 to=232)
AMDSBA3_6_40
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41560..42513
DNA (954bp) protein (318aa)
ABC transporter
ABC transporter
ABC-type transporter, integral membrane subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8U1I4_9FIRM (db=UNIREF evalue=1.1e-146 bit_score=525.0 identity=76.3 coverage=99.37106918238993)
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=199)
AMDSBA3_6_41
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42573..43724
DNA (1152bp) protein (384aa)
amidohydrolase rbh
Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E998_9ACTN (db=UNIREF evalue=1.7e-56 bit_score=225.7 identity=36.2 coverage=96.35416666666666)
seg (db=Seg db_id=seg from=264 to=279)
amidohydrolases: amidohydrolase (db=HMMTigr db_id=TIGR01891 from=15 to=372 evalue=4.4e-125 interpro_id=IPR017439 interpro_description=Amidohydrolase GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA3_6_42
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43789..44433
DNA (645bp) protein (215aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IC94_SULAT (db=UNIREF evalue=3.4e-19 bit_score=100.9 identity=33.0 coverage=80.0)
seg (db=Seg db_id=seg from=35 to=48)
seg (db=Seg db_id=seg from=8 to=27)
AMDSBA3_6_43
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44419..45561)
DNA (1143bp) protein (381aa)
prolipoprotein diacylglyceryl transferase
Prolipoprotein diacylglyceryl transferase n=6 Tax=Coxiella burnetii RepID=LGT_COXB1 (db=UNIREF evalue=6.3e-16 bit_score=90.9 identity=26.0 coverage=65.35433070866141)
transmembrane_regions (db=TMHMM db_id=tmhmm from=186 to=203)
transmembrane_regions (db=TMHMM db_id=tmhmm from=218 to=240)
AMDSBA3_6_44
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45738..46694)
DNA (957bp) protein (319aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95) rbh
Phosphoglycerate dehydrogenase and related dehydrogenases n=2 Tax=Megamonas RepID=D4KHL2_9FIRM (db=UNIREF evalue=2.8e-17 bit_score=95.1 identity=25.9 coverage=90.9090909090909)
D-3-PHOSPHOGLYCERATE DEHYDROGENASE (db=HMMPanther db_id=PTHR10996:SF20 from=2 to=314 evalue=9.1e-82 interpro_id=IPR006236 interpro_description=D-3-phosphoglycerate dehydrogenase GO=Molecular Function: phosphoglycerate dehydrogenase activity (GO:0004617), Biological Process: L-serine biosynthetic process (GO:0006564), Biological Process: oxidation-reduction process (GO:0055114))
2-HYDROXYACID DEHYDROGENASE (db=HMMPanther db_id=PTHR10996 from=2 to=314 evalue=9.1e-82)
AMDSBA3_6_45
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46799..47161
DNA (363bp) protein (121aa)
seg (db=Seg db_id=seg from=11 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
(db=HMMPfam db_id=PF04347 from=25 to=109 evalue=1.7e-13 interpro_id=IPR022781 interpro_description=Flagellar biosynthesis protein, FliO GO=Cellular Component: integral to membrane (GO:0016021), Cellular Component: flagellum (GO:0019861), Biological Process: flagellum organization (GO:0043064))
flagellar biosynthesis protein FliO
AMDSBA3_6_46
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47158..47919
DNA (762bp) protein (254aa)
flagellar biosynthetic protein FliP rbh
flagellar biosynthetic protein FliP rbh
Flagellar biosynthetic protein FliP n=2 Tax=Sulfobacillus acidophilus RepID=G8U1I0_9FIRM (db=UNIREF evalue=5.7e-98 bit_score=362.8 identity=73.7 coverage=96.8503937007874)
seg (db=Seg db_id=seg from=8 to=24)
AMDSBA3_6_47
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47922..48194
DNA (273bp) protein (91aa)
export protein FliQ family 3
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=18 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
AMDSBA3_6_48
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48294..49076
DNA (783bp) protein (261aa)
type III secretion system inner membrane R protein rbh
type III secretion system inner membrane R protein rbh
Type III secretion system inner membrane R protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U1H8_9FIRM (db=UNIREF evalue=8.8e-94 bit_score=349.0 identity=66.8 coverage=98.46743295019157)
transmembrane_regions (db=TMHMM db_id=tmhmm from=208 to=230)
AMDSBA3_6_49
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49073..50164
DNA (1092bp) protein (364aa)
type III secretion exporter rbh
Type III secretion component protein SctU n=1 Tax=Arsenophonus nasoniae RepID=D2TXN3_9ENTR (db=UNIREF evalue=4.3e-38 bit_score=164.5 identity=31.6 coverage=93.13186813186813)
transmembrane_regions (db=TMHMM db_id=tmhmm from=151 to=173)
seg (db=Seg db_id=seg from=44 to=55)
AMDSBA3_6_50
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50161..52203
DNA (2043bp) protein (681aa)
Flagellar biosynthesis protein FlhA n=2 Tax=Sulfobacillus acidophilus RepID=G8U1H6_9FIRM (db=UNIREF evalue=0.0 bit_score=1112.4 identity=83.5 coverage=99.70631424375918)
flagellar biosynthesis protein FlhA rbh
flagellar biosynthesis protein FlhA rbh
AMDSBA3_6_51
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52200..53351
DNA (1152bp) protein (384aa)
flagellar biosynthetic protein FlhF rbh
flagellar biosynthetic protein FlhF rbh
Flagellar biosynthetic protein FlhF n=2 Tax=Sulfobacillus acidophilus RepID=G8U1H5_9FIRM (db=UNIREF evalue=1.1e-108 bit_score=399.1 identity=55.1 coverage=95.83333333333334)
AMDSBA3_6_52
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53344..54255
DNA (912bp) protein (304aa)
Cobyrinic acid ac-diamide synthase rbh
Putative flagellar biosynthesis protein FlhG n=1 Tax=Selenomonas ruminantium subsp. lactilytica TAM6421 RepID=I0GND0_SELRL (db=UNIREF evalue=6.1e-46 bit_score=190.3 identity=34.9 coverage=95.06578947368422)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=31 to=281 evalue=3.3e-53)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=32 to=273 evalue=1.4e-49)
AMDSBA3_6_53
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54267..54995
DNA (729bp) protein (243aa)
flagellar hook-basal body protein
Flagellar hook-basal body protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U1H3_9FIRM (db=UNIREF evalue=3.2e-74 bit_score=283.9 identity=62.0 coverage=97.94238683127571)
FlgEFG_subfam: fagellar hook-basal body (db=HMMTigr db_id=TIGR03506 from=2 to=221 evalue=1.3e-46 interpro_id=IPR020013 interpro_description=Fagellar hook-basal body protein, FlgE/F/G)
Flagellar hook protein flgE (db=superfamily db_id=SSF117143 from=84 to=200 evalue=4.4e-17)
AMDSBA3_6_54
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55016..55786
DNA (771bp) protein (257aa)
flagellar hook-basal body protein rbh
Flagellar basal-body rod protein flgG n=9 Tax=Bacillus RepID=FLGG_BACSU (db=UNIREF evalue=5.0e-25 bit_score=120.6 identity=32.8 coverage=98.83268482490273)
seg (db=Seg db_id=seg from=19 to=30)
FLAGELLA_BB_ROD (db=PatternScan db_id=PS00588 from=11 to=31 evalue=0.0 interpro_id=IPR019776 interpro_description=Flagellar basal body rod protein, conserved site GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: motor activity (GO:0003774), Molecular Function: structural molecule activity (GO:0005198), Cellular Component: bacterial-type flagellum (GO:0009288))
AMDSBA3_6_55
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55775..56368)
DNA (594bp) protein (198aa)
lytic transglycosylase
Transglycosylase SLT domain protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SNZ3_9RHOB (db=UNIREF evalue=2.0e-21 bit_score=108.2 identity=52.7 coverage=54.54545454545454)
seg (db=Seg db_id=seg from=65 to=79)
seg (db=Seg db_id=seg from=46 to=62)
AMDSBA3_6_56
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56455..56931
DNA (477bp) protein (159aa)
flagellar basal body-associated protein FliL
Flagellar basal body-associated protein FliL n=2 Tax=Sulfobacillus acidophilus RepID=G8U1H0_9FIRM (db=UNIREF evalue=4.6e-53 bit_score=213.0 identity=66.2 coverage=98.74213836477988)
seg (db=Seg db_id=seg from=78 to=101)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
AMDSBA3_6_57
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56964..57866
DNA (903bp) protein (301aa)
flagellar motor switch protein FliM rbh
Flagellar motor switch protein FliM n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A553_GEMAT (db=UNIREF evalue=5.7e-20 bit_score=104.0 identity=22.2 coverage=94.6843853820598)
seg (db=Seg db_id=seg from=50 to=63)
(db=HMMPfam db_id=PF01052 from=224 to=297 evalue=1.5e-14 interpro_id=IPR001543 interpro_description=Surface presentation of antigen (SpoA))
AMDSBA3_6_58
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57868..58287
DNA (420bp) protein (140aa)
Flagellar motor switch protein FliN n=2 Tax=Sulfobacillus acidophilus RepID=G8U1G8_9FIRM (db=UNIREF evalue=9.3e-42 bit_score=175.3 identity=64.3 coverage=97.85714285714285)
flagellar motor switch protein FliN
Surface presentation of antigens (SPOA) (db=superfamily db_id=SSF101801 from=51 to=137 evalue=1.0e-21 interpro_id=IPR001543 interpro_description=Surface presentation of antigen (SpoA))
(db=HMMPfam db_id=PF01052 from=57 to=126 evalue=5.3e-21 interpro_id=IPR001543 interpro_description=Surface presentation of antigen (SpoA))
AMDSBA3_6_59
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58232..58495)
DNA (264bp) protein (88aa)
carbon storage regulator CsrA
Carbon storage regulator, CsrA n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8U1G7_9FIRM (db=UNIREF evalue=7.2e-24 bit_score=115.2 identity=64.4 coverage=97.72727272727273)
seg (db=Seg db_id=seg from=73 to=87)
csrA: carbon storage regulator (db=HMMTigr db_id=TIGR00202 from=1 to=70 evalue=1.7e-22 interpro_id=IPR003751 interpro_description=Carbon storage regulator GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of carbohydrate metabolic process (GO:0006109), Biological Process: mRNA catabolic process (GO:0006402))
AMDSBA3_6_60
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58476..58940)
DNA (465bp) protein (155aa)
flagellar assembly factor fliW
Flagellar assembly factor FliW n=2 Tax=Sulfobacillus acidophilus RepID=G8U1G6_9FIRM (db=UNIREF evalue=4.1e-46 bit_score=189.9 identity=57.8 coverage=93.54838709677419)
BH3618-like (db=superfamily db_id=SSF141457 from=1 to=143 evalue=1.1e-26 interpro_id=IPR024046 interpro_description=Flagellar assembly factor FliW domain)
(db=HMMPfam db_id=PF02623 from=22 to=134 evalue=9.4e-21 interpro_id=IPR003775 interpro_description=Flagellar assembly factor FliW GO=Biological Process: flagellum assembly (GO:0009296), Cellular Component: flagellum (GO:0019861))
Displaying items 31-60 of 96 in total

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