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AMDSBA3_9

Alias: AMDSBA3_C8

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA3_9_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(147..1295)
-----------------
DNA (1149bp)
protein (383aa)
Cysteine desulfurase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSK1_9FIRM (db=UNIREF evalue=8.3e-133 bit_score=479.2 identity=58.7 coverage=98.43342036553526)
cysteine desulfurase (EC:2.8.1.7) rbh
cysteine desulfurase (EC:2.8.1.7) rbh
AMDSBA3_9_2
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1298..2986)
-----------------
DNA (1689bp)
protein (563aa)
peptidase M14 carboxypeptidase A
peptidase M14 carboxypeptidase A
Peptidase M14 carboxypeptidase A n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WU61_ALIAD (db=UNIREF evalue=1.0e-184 bit_score=652.1 identity=58.2 coverage=98.75666074600356)
AMDSBA3_9_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3289..4128
-----------------
DNA (840bp)
protein (280aa)
Endonuclease IV (EC:3.1.21.-)
Endonuclease IV (EC:3.1.21.-)
Probable endonuclease 4 n=2 Tax=Sulfobacillus acidophilus RepID=G8TSK7_9FIRM (db=UNIREF evalue=2.1e-109 bit_score=401.0 identity=70.4 coverage=98.57142857142858)
AMDSBA3_9_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4142..5020
-----------------
DNA (879bp)
protein (293aa)
hypothetical protein rbh
hypothetical protein rbh
Diacylglycerol kinase, catalytic region n=2 Tax=Sulfobacillus acidophilus RepID=F8I2M3_SULAT (db=UNIREF evalue=8.6e-114 bit_score=415.6 identity=68.3 coverage=98.29351535836177)
AMDSBA3_9_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5017..6219
-----------------
DNA (1203bp)
protein (401aa)
glycosyl transferase family protein (EC:3.2.1.21) rbh
Beta-galactosidase n=1 Tax=Starkeya novella DSM 506 RepID=D7A385_STAND (db=UNIREF evalue=2.8e-22 bit_score=112.1 identity=28.0 coverage=56.60847880299252)
GLYCOSYL_HYDROL_F1_1 (db=PatternScan db_id=PS00572 from=305 to=313 evalue=0.0 interpro_id=IPR018120 interpro_description=Glycoside hydrolase, family 1, active site GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolic process (GO:0005975))
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=9 to=396 evalue=3.1e-115 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, superfamily)
AMDSBA3_9_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6206..6724)
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSL0_9FIRM (db=UNIREF evalue=7.3e-28 bit_score=129.4 identity=40.2 coverage=97.10982658959537)
coiled-coil (db=Coil db_id=coil from=14 to=42 evalue=NA)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I2M5_SULAT
AMDSBA3_9_7
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7044..7424)
-----------------
DNA (381bp)
protein (127aa)
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Frankia sp. CN3 RepID=G6H902_9ACTO (db=UNIREF evalue=3.7e-21 bit_score=106.7 identity=49.6 coverage=91.33858267716536)
LACTOYLGLUTATHIONE LYASE (GLYOXALASE I) (db=HMMPanther db_id=PTHR10374 from=1 to=29 evalue=4.5e-07)
GLYOXALASE_I_1 (db=PatternScan db_id=PS00934 from=8 to=29 evalue=0.0 interpro_id=IPR018146 interpro_description=Glyoxalase I, conserved site GO=Molecular Function: lactoylglutathione lyase activity (GO:0004462), Molecular Function: metal ion binding (GO:0046872))
AMDSBA3_9_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7522..8508)
-----------------
DNA (987bp)
protein (329aa)
ATP-NAD/AcoX kinase
ATP-NAD/AcoX kinase
ATP-NAD/AcoX kinase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSL2_9FIRM (db=UNIREF evalue=2.9e-94 bit_score=350.9 identity=57.6 coverage=96.96048632218846)
AMDSBA3_9_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8505..8930)
-----------------
DNA (426bp)
protein (142aa)
seg (db=Seg db_id=seg from=12 to=24)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=140 evalue=6.0e-28)
no description (db=HMMSmart db_id=SM00347 from=23 to=123 evalue=2.0e-16 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF01047 from=30 to=88 evalue=5.2e-13 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA3_9_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9067..9687
-----------------
DNA (621bp)
protein (207aa)
phosphoglycerate mutase
Phosphoglycerate mutase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSL7_9FIRM (db=UNIREF evalue=6.6e-68 bit_score=262.7 identity=61.1 coverage=97.58454106280193)
PG_MUTASE (db=PatternScan db_id=PS00175 from=9 to=18 evalue=0.0 interpro_id=IPR001345 interpro_description=Phosphoglycerate/bisphosphoglycerate mutase, active site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=5 to=198 evalue=1.1e-44)
AMDSBA3_9_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9978..10919
-----------------
DNA (942bp)
protein (314aa)
ABC transporter periplasmic protein
Cobalamin-binding protein n=2 Tax=Halobacterium salinarum RepID=BTUFA_HALS3 (db=UNIREF evalue=1.2e-23 bit_score=116.3 identity=29.6 coverage=96.81528662420382)
seg (db=Seg db_id=seg from=7 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA3_9_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10923..11927
-----------------
DNA (1005bp)
protein (335aa)
ABC transporter rbh
ABC transporter rbh
ABC-type transporter, integral membrane subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TT22_9FIRM (db=UNIREF evalue=4.0e-131 bit_score=473.4 identity=70.7 coverage=97.61194029850746)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA3_9_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11915..12718
-----------------
DNA (804bp)
protein (268aa)
corrinoid ABC transporter ATPase
Thiol reductant ABC exporter, CydD subunit n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A851_9PROT (db=UNIREF evalue=7.3e-19 bit_score=100.1 identity=30.5 coverage=82.46268656716418)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=10 to=266 evalue=9.7e-70)
METAL ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF31 from=10 to=266 evalue=9.7e-70)
AMDSBA3_9_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12816..14063
-----------------
DNA (1248bp)
protein (416aa)
family 2 glycosyl transferase
coiled-coil (db=Coil db_id=coil from=385 to=406 evalue=NA)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=159 evalue=6.0e-24)
(db=HMMPfam db_id=PF00535 from=7 to=107 evalue=1.0e-17 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
AMDSBA3_9_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14038..14457)
-----------------
DNA (420bp)
protein (140aa)
flagellar protein FliS
Flagellar protein FliS n=2 Tax=Sulfobacillus acidophilus RepID=G8TT25_9FIRM (db=UNIREF evalue=4.0e-16 bit_score=90.1 identity=41.1 coverage=95.0)
Flagellar export chaperone FliS (db=superfamily db_id=SSF101116 from=5 to=126 evalue=9.3e-10 interpro_id=IPR003713 interpro_description=Flagellar protein FliS GO=Cellular Component: bacterial-type flagellum (GO:0009288), Biological Process: flagellum assembly (GO:0009296))
no description (db=Gene3D db_id=G3DSA:1.20.120.340 from=4 to=129 evalue=3.0e-07 interpro_id=IPR003713 interpro_description=Flagellar protein FliS GO=Cellular Component: bacterial-type flagellum (GO:0009288), Biological Process: flagellum assembly (GO:0009296))
AMDSBA3_9_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14461..15960)
-----------------
DNA (1500bp)
protein (500aa)
flagellar hook-associated 2 domain-containing protein
Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V3K4_MONBE (db=UNIREF evalue=1.4e-10 bit_score=73.6 identity=23.0 coverage=86.6)
seg (db=Seg db_id=seg from=160 to=182)
seg (db=Seg db_id=seg from=30 to=41)
AMDSBA3_9_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16033..17823)
-----------------
DNA (1791bp)
protein (597aa)
flagellin domain-containing protein
coiled-coil (db=Coil db_id=coil from=107 to=128 evalue=NA)
coiled-coil (db=Coil db_id=coil from=9 to=30 evalue=NA)
seg (db=Seg db_id=seg from=212 to=231)
AMDSBA3_9_18
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(18063..20405)
-----------------
DNA (2343bp)
protein (781aa)
Glycosyltransferase
seg (db=Seg db_id=seg from=630 to=641)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=441 to=776 evalue=3.5e-34)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF26 from=520 to=770 evalue=2.8e-31)
AMDSBA3_9_19
unknown

Not on your lists

comp(20442..20684)
-----------------
DNA (243bp)
protein (81aa)
20442..20684 - ( gc_cont=0.568)
AMDSBA3_9_20
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20827..21984
-----------------
DNA (1158bp)
protein (386aa)
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=23 to=356 evalue=1.4e-25)
no description (db=Gene3D db_id=G3DSA:2.30.40.10 from=1 to=57 evalue=1.7e-07)
(db=HMMPfam db_id=PF01979 from=288 to=358 evalue=3.0e-07 interpro_id=IPR006680 interpro_description=Amidohydrolase 1 GO=Molecular Function: hydrolase activity (GO:0016787))
N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE (db=HMMPanther db_id=PTHR11113 from=319 to=385 evalue=1.6e-06)
AMDSBA3_9_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22072..23478)
-----------------
DNA (1407bp)
protein (469aa)
major facilitator superfamily protein
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=3 Tax=Alicyclobacillus acidocaldarius RepID=F8IDR0_ALIAT (db=UNIREF evalue=3.1e-121 bit_score=441.0 identity=46.9 coverage=98.72068230277186)
transmembrane_regions (db=TMHMM db_id=tmhmm from=295 to=317)
AMDSBA3_9_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23581..24438)
-----------------
DNA (858bp)
protein (286aa)
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase n=1 Tax=uncultured archaeon RepID=I3RKT0_9ARCH (db=UNIREF evalue=7.0e-28 bit_score=130.2 identity=30.8 coverage=96.15384615384616)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=285 evalue=1.1e-59)
(db=HMMPfam db_id=PF04321 from=1 to=263 evalue=5.8e-53 interpro_id=IPR005913 interpro_description=dTDP-4-dehydrorhamnose reductase GO=Molecular Function: dTDP-4-dehydrorhamnose reductase activity (GO:0008831), Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226))
AMDSBA3_9_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24435..24779)
-----------------
DNA (345bp)
protein (115aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TT35_9FIRM (db=UNIREF evalue=7.4e-29 bit_score=132.1 identity=57.8 coverage=93.04347826086956)
Nitrogenase accessory factor-like (db=superfamily db_id=SSF53146 from=1 to=107 evalue=2.3e-16 interpro_id=IPR003731 interpro_description=Dinitrogenase iron-molybdenum cofactor biosynthesis)
(db=HMMPfam db_id=PF02579 from=10 to=100 evalue=9.5e-10 interpro_id=IPR003731 interpro_description=Dinitrogenase iron-molybdenum cofactor biosynthesis)
AMDSBA3_9_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24791..25810)
-----------------
DNA (1020bp)
protein (340aa)
beta-lactamase
Beta-lactamase domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJ60_DESAA (db=UNIREF evalue=6.0e-26 bit_score=124.0 identity=31.0 coverage=79.70588235294119)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=28 to=262 evalue=1.1e-35)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=41 to=259 evalue=9.6e-34)
AMDSBA3_9_25
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26033..27280
-----------------
DNA (1248bp)
protein (416aa)
IS605 OrfB family transposase
Transposase-like protein B n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKL4_9BACT (db=UNIREF evalue=3.2e-37 bit_score=161.8 identity=33.4 coverage=78.36538461538461)
coiled-coil (db=Coil db_id=coil from=245 to=266 evalue=NA)
(db=HMMPfam db_id=PF01385 from=83 to=292 evalue=2.0e-42 interpro_id=IPR001959 interpro_description=Transposase, probable, IS891/IS1136/IS1341)
AMDSBA3_9_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27474..28631
-----------------
DNA (1158bp)
protein (386aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.83) rbh
LL-diaminopimelate aminotransferase (EC:2.6.1.83) rbh
Aminotransferase class I and II n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L3K6_9BACI (db=UNIREF evalue=9.0e-103 bit_score=379.4 identity=50.8 coverage=97.66839378238342)
AMDSBA3_9_27
unknown

Not on your lists

28756..29979
-----------------
DNA (1224bp)
protein (408aa)
seg (db=Seg db_id=seg from=4 to=23)
AMDSBA3_9_28
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30096..31280)
-----------------
DNA (1185bp)
protein (395aa)
amiB; amidohydrolase rbh
Uncharacterized protein n=1 Tax=Sarcophilus harrisii RepID=G3WHS0_SARHA (db=UNIREF evalue=1.9e-55 bit_score=222.2 identity=35.6 coverage=97.46835443037975)
seg (db=Seg db_id=seg from=98 to=114)
seg (db=Seg db_id=seg from=352 to=367)
AMDSBA3_9_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31426..32022
-----------------
DNA (597bp)
protein (199aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YG16_METS5 (db=UNIREF evalue=3.5e-26 bit_score=124.0 identity=38.4 coverage=89.44723618090453)
seg (db=Seg db_id=seg from=165 to=178)
seg (db=Seg db_id=seg from=131 to=153)
AMDSBA3_9_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32086..33897
-----------------
DNA (1812bp)
protein (604aa)
Peptidase M61 domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TT53_9FIRM (db=UNIREF evalue=1.0e-230 bit_score=805.1 identity=63.5 coverage=98.50993377483444)
peptidase M61 domain-containing protein rbh
peptidase M61 domain-containing protein rbh
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=179 to=443 evalue=2.1e-17)
Displaying items 1-30 of 68 in total

View Taxonomy