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AMDSBA3_15

Alias: AMDSBA3_C14

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Displaying items 31-57 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_15_31
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34158..34556)
DNA (399bp) protein (133aa)
EXTRADIOL_DIOXYGENAS (db=PatternScan db_id=PS00082 from=63 to=82 evalue=0.0 interpro_id=IPR000486 interpro_description=Extradiol ring-cleavage dioxygenase, class I /II GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: cellular aromatic compound metabolic process (GO:0006725), Molecular Function: ferrous iron binding (GO:0008198), Biological Process: oxidation-reduction process (GO:0055114))
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=32 to=88 evalue=9.2e-10)
(db=HMMPfam db_id=PF00903 from=18 to=83 evalue=1.3e-06 interpro_id=IPR004360 interpro_description=Glyoxalase/fosfomycin resistance/dioxygenase)
no description (db=Gene3D db_id=G3DSA:3.10.180.10 from=32 to=86 evalue=0.00075)
AMDSBA3_15_32
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34685..35542)
DNA (858bp) protein (286aa)
sulfate-binding protein
Molybdate ABC transporter, periplasmic molybdate-binding protein n=2 Tax=Selenomonas RepID=E4LM69_9FIRM (db=UNIREF evalue=2.8e-08 bit_score=65.1 identity=25.8 coverage=79.37062937062937)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=25 to=276 evalue=7.4e-25)
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=115 to=220 evalue=2.9e-06)
AMDSBA3_15_33
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35529..35867)
DNA (339bp) protein (113aa)
hypothetical protein
DsrEFH-like (db=superfamily db_id=SSF75169 from=1 to=112 evalue=5.3e-29)
no description (db=Gene3D db_id=G3DSA:3.40.1260.10 from=2 to=112 evalue=6.0e-28)
(db=HMMPfam db_id=PF02635 from=4 to=112 evalue=4.0e-22 interpro_id=IPR003787 interpro_description=Sulphur relay, DsrE/F-like protein)
AMDSBA3_15_34
unknown

Not on your lists

36163..36306
DNA (144bp) protein (48aa)
36163..36306 + ( gc_cont=0.493)
AMDSBA3_15_35
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

36276..36902
DNA (627bp) protein (209aa)
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Putative oxidase/hydroxylase n=1 Tax=Streptomyces hygroscopicus subsp. hygroscopicus RepID=Q2MFS1_STRHY (db=UNIREF evalue=2.2e-10 bit_score=71.6 identity=32.8 coverage=77.51196172248804)
Clavaminate synthase-like (db=superfamily db_id=SSF51197 from=15 to=170 evalue=9.9e-20)
(db=HMMPfam db_id=PF05721 from=68 to=155 evalue=4.6e-12 interpro_id=IPR008775 interpro_description=Phytanoyl-CoA dioxygenase)
AMDSBA3_15_36
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(36929..38107)
DNA (1179bp) protein (393aa)
UBA/THIF-type NAD/FAD binding protein
Adenylyltransferase and sulfurtransferase MOCS3 2 n=9 Tax=Andropogoneae RepID=MOC32_MAIZE (db=UNIREF evalue=1.0e-69 bit_score=269.6 identity=39.0 coverage=95.16539440203562)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
seg (db=Seg db_id=seg from=39 to=61)
AMDSBA3_15_37
unknown

Not on your lists

comp(38149..38322)
DNA (174bp) protein (58aa)
38149..38322 - ( gc_cont=0.494)
AMDSBA3_15_38
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(38733..39026)
DNA (294bp) protein (98aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Alicyclobacillus acidocaldarius RepID=F8IG31_ALIAT (db=UNIREF evalue=5.2e-23 bit_score=112.5 identity=51.5 coverage=97.95918367346938)
Uncharacterized protein {ECO:0000313|EMBL:ACV59168.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius
Uncharacterized protein n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WQZ9_ALIAD
AMDSBA3_15_39
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(39023..39670)
DNA (648bp) protein (216aa)
39023..39670 - ( gc_cont=0.563)
transposase
Transposase {ECO:0000313|EMBL:AEJ38642.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus aci
AMDSBA3_15_40
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40106..40573
DNA (468bp) protein (156aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWG7_9FIRM (db=UNIREF evalue=5.7e-48 bit_score=196.1 identity=65.3 coverage=89.1025641025641)
seg (db=Seg db_id=seg from=72 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
AMDSBA3_15_41
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(40619..41800)
DNA (1182bp) protein (394aa)
Aquaporin-6 n=6 Tax=Muroidea RepID=AQP6_MOUSE (db=UNIREF evalue=8.8e-13 bit_score=80.5 identity=30.2 coverage=56.09137055837563)
transmembrane_regions (db=TMHMM db_id=tmhmm from=18 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=333 to=355)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=313)
AMDSBA3_15_42
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41887..43581
DNA (1695bp) protein (565aa)
sulfite reductase (NADPH) beta subunit (EC:1.8.1.2)
sulfite reductase (NADPH) beta subunit (EC:1.8.1.2)
Sulfite reductase (NADPH) beta subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8U1R5_9FIRM (db=UNIREF evalue=1.2e-148 bit_score=532.3 identity=51.1 coverage=95.75221238938053)
AMDSBA3_15_43
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43636..44319
DNA (684bp) protein (228aa)
phosphoadenosine phosphosulfate reductase
Phosphoadenosine phosphosulfate reductase n=21 Tax=Bacillus RepID=CYSH_BACA2 (db=UNIREF evalue=3.9e-53 bit_score=213.8 identity=45.1 coverage=92.54385964912281)
cysH: phosophoadenylyl-sulfate reductase (db=HMMTigr db_id=TIGR00434 from=18 to=227 evalue=9.4e-88 interpro_id=IPR004511 interpro_description=Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO=Molecular Function: phosphoadenylyl-sulfate reductase (thioredoxin) activity (GO:0004604), Biological Process: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) (GO:0019379), Biological Process: oxidation-reduction process (GO:0055114))
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=5 to=197 evalue=1.0e-57 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
AMDSBA3_15_44
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44316..45413
DNA (1098bp) protein (366aa)
sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase n=1 Tax=Cenarchaeum symbiosum A RepID=SAT_CENSY (db=UNIREF evalue=2.9e-58 bit_score=231.5 identity=35.7 coverage=92.07650273224044)
sopT: sulfate adenylyltransferase (db=HMMTigr db_id=TIGR00339 from=8 to=358 evalue=7.2e-109 interpro_id=IPR002650 interpro_description=Sulphate adenylyltransferase GO=Biological Process: sulfate assimilation (GO:0000103), Molecular Function: sulfate adenylyltransferase (ATP) activity (GO:0004781))
(db=HMMPfam db_id=PF01747 from=54 to=360 evalue=7.9e-101 interpro_id=IPR002650 interpro_description=Sulphate adenylyltransferase GO=Biological Process: sulfate assimilation (GO:0000103), Molecular Function: sulfate adenylyltransferase (ATP) activity (GO:0004781))
AMDSBA3_15_45
Dehalogenimonas lykanthroporepellens, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

45415..45999
DNA (585bp) protein (195aa)
siroheme synthase
seg (db=Seg db_id=seg from=93 to=105)
seg (db=Seg db_id=seg from=172 to=183)
cysG_Nterm: siroheme synthase, N-terminal (db=HMMTigr db_id=TIGR01470 from=4 to=193 evalue=1.7e-19 interpro_id=IPR006367 interpro_description=Sirohaem synthase, N-terminal GO=Biological Process: porphyrin-containing compound biosynthetic process (GO:0006779), Molecular Function: precorrin-2 dehydrogenase activity (GO:0043115), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA3_15_46
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45984..46763
DNA (780bp) protein (260aa)
cobA; uroporphyrin-III C-methyltransferase
Uroporphyrinogen-III methylase n=1 Tax=Methanopyrus kandleri AV19 RepID=Q8TV52_METKA (db=UNIREF evalue=2.3e-33 bit_score=148.3 identity=36.8 coverage=89.23076923076924)
seg (db=Seg db_id=seg from=101 to=112)
SUMT_1 (db=PatternScan db_id=PS00839 from=12 to=26 evalue=0.0 interpro_id=IPR003043 interpro_description=Uroporphiryn-III C-methyltransferase, conserved site GO=Biological Process: porphyrin-containing compound biosynthetic process (GO:0006779), Molecular Function: methyltransferase activity (GO:0008168), Molecular Function: precorrin-2 dehydrogenase activity (GO:0043115), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA3_15_47
unknown

Not on your lists

comp(47115..47690)
DNA (576bp) protein (192aa)
47115..47690 - ( gc_cont=0.528)
AMDSBA3_15_48
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48004..49008
DNA (1005bp) protein (335aa)
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase n=1 Tax=Methylophaga sp. JAM1 RepID=I1XJ80_METNJ (db=UNIREF evalue=1.4e-22 bit_score=112.8 identity=34.9 coverage=48.95522388059702)
GGDEF: diguanylate cyclase (GGDEF) domain (db=HMMTigr db_id=TIGR00254 from=161 to=325 evalue=1.8e-40 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
no description (db=HMMSmart db_id=SM00267 from=155 to=324 evalue=6.2e-55 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
AMDSBA3_15_49
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(49177..50352)
DNA (1176bp) protein (392aa)
seg (db=Seg db_id=seg from=263 to=277)
Oligoxyloglucan reducing end-specific cellobiohydrolase (db=superfamily db_id=SSF110296 from=32 to=364 evalue=3.3e-08)
Uncharacterized protein {ECO:0000313|EMBL:KJF18683.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxida
AMDSBA3_15_50
unknown

Not on your lists

comp(50440..51123)
DNA (684bp) protein (228aa)
seg (db=Seg db_id=seg from=4 to=17)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=5.0)
AMDSBA3_15_51
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51319..51963)
DNA (645bp) protein (215aa)
cyclase family protein
Cyclase family protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ID70_9EURY (db=UNIREF evalue=1.7e-10 bit_score=72.0 identity=29.3 coverage=78.6046511627907)
seg (db=Seg db_id=seg from=77 to=94)
seg (db=Seg db_id=seg from=163 to=178)
AMDSBA3_15_52
RIFOXYA1_FULL_Paenibacillus_44_5_curated, Firmicutes, Bacteria

Not on your lists

comp(51981..53003)
DNA (1023bp) protein (341aa)
alcohol dehydrogenase
D-arabitol-phosphate dehydrogenase n=1 Tax=Enterococcus avium RepID=ARPD_ENTAV (db=UNIREF evalue=1.1e-43 bit_score=183.0 identity=32.7 coverage=98.53372434017595)
seg (db=Seg db_id=seg from=38 to=50)
ADH_ZINC (db=PatternScan db_id=PS00059 from=58 to=72 evalue=0.0 interpro_id=IPR002328 interpro_description=Alcohol dehydrogenase, zinc-type, conserved site GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA3_15_53
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53019..53402)
DNA (384bp) protein (128aa)
endoribonuclease L-PSP
Putative uncharacterized protein n=2 Tax=Streptomyces RepID=D6EU79_STRLI (db=UNIREF evalue=3.9e-26 bit_score=123.2 identity=54.0 coverage=94.53125)
TIGR00004: putative endoribonuclease L-PSP (db=HMMTigr db_id=TIGR00004 from=3 to=126 evalue=7.8e-41 interpro_id=IPR006056 interpro_description=YjgF-like protein)
YjgF-like (db=superfamily db_id=SSF55298 from=3 to=127 evalue=1.4e-37 interpro_id=IPR013813 interpro_description=Endoribonuclease L-PSP/chorismate mutase-like)
AMDSBA3_15_54
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(53413..54510)
DNA (1098bp) protein (366aa)
alanine racemase domain-containing protein
Serine racemase n=3 Tax=Fusobacterium RepID=C6JKB2_FUSVA (db=UNIREF evalue=5.6e-38 bit_score=164.1 identity=28.0 coverage=97.81420765027322)
coiled-coil (db=Coil db_id=coil from=17 to=38 evalue=NA)
PLP-binding barrel (db=superfamily db_id=SSF51419 from=16 to=244 evalue=5.0e-39)
AMDSBA3_15_55
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(54521..55282)
DNA (762bp) protein (254aa)
short-chain dehydrogenase/reductase SDR
Whole genome shotgun sequence assembly, scaffold_55, strain Mel28 n=1 Tax=Tuber melanosporum Mel28 RepID=D5GK05_TUBMM (db=UNIREF evalue=3.5e-31 bit_score=141.0 identity=35.3 coverage=96.45669291338582)
ADH_SHORT (db=PatternScan db_id=PS00061 from=144 to=172 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
3-OXOACYL-(ACYL CARRIER PROTEIN) REDUCTASE-RELATED (db=HMMPanther db_id=PTHR19410:SF85 from=1 to=247 evalue=1.3e-89)
AMDSBA3_15_56
unknown

Not on your lists

55642..55908
DNA (267bp) protein (89aa)
55642..55908 + ( gc_cont=0.581)
AMDSBA3_15_57
Bacillus halodurans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(55900..56820)
DNA (921bp) protein (307aa)
aryl-alcohol dehydrogenase
aryl-alcohol dehydrogenase
Oxidoreductase YdhF n=1 Tax=Ruegeria sp. R11 RepID=B7QTU5_9RHOB (db=UNIREF evalue=1.3e-35 bit_score=156.0 identity=31.4 coverage=85.66775244299674)
ALDO-KETO REDUCTASE (db=HMMPanther db_id=PTHR11732:SF10 from=1 to=272 evalue=6.2e-89)
Displaying items 31-57 of 57 in total

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