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AMDSBA3_15

Alias: AMDSBA3_C14

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_15_1
unknown

Not on your lists

2..223
DNA (222bp) protein (74aa)
2..223 + ( gc_cont=0.599)
AMDSBA3_15_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(283..1533)
DNA (1251bp) protein (417aa)
major facilitator superfamily protein rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TUU3_9FIRM (db=UNIREF evalue=2.6e-164 bit_score=583.9 identity=68.8 coverage=96.64268585131894)
transmembrane_regions (db=TMHMM db_id=tmhmm from=378 to=400)
AMDSBA3_15_3
unknown

Not on your lists

comp(1760..1963)
DNA (204bp) protein (68aa)
coiled-coil (db=Coil db_id=coil from=1 to=29 evalue=NA)
seg (db=Seg db_id=seg from=14 to=27)
(db=HMMPfam db_id=PF09388 from=8 to=50 evalue=1.4e-05 interpro_id=IPR018540 interpro_description=Sporulation stage 0, Spo0E-like regulatory phosphatase)
AMDSBA3_15_4
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2779..3948
DNA (1170bp) protein (390aa)
hydrolase C-terminus
Hydrolase, UxaA family n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L183_9BACT (db=UNIREF evalue=6.8e-82 bit_score=310.1 identity=43.2 coverage=97.94871794871794)
seg (db=Seg db_id=seg from=200 to=212)
AMDSBA3_15_5
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3948..5144
DNA (1197bp) protein (399aa)
Hydrolase, UxaA family protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JTC4_9RHOB (db=UNIREF evalue=1.4e-10 bit_score=73.2 identity=49.4 coverage=19.047619047619047)
2-HYDROXYHEPTA-2,4-DIENE-1,7-DIOATE ISOMERASE (db=HMMPanther db_id=PTHR11820:SF2 from=66 to=299 evalue=1.7e-42)
FUMARYLACETOACETATE HYDROLASE (db=HMMPanther db_id=PTHR11820 from=66 to=299 evalue=1.7e-42)
FAH (db=superfamily db_id=SSF56529 from=64 to=290 evalue=4.9e-31 interpro_id=IPR011234 interpro_description=Fumarylacetoacetase, C-terminal-related GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBA3_15_6
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5141..5980
DNA (840bp) protein (280aa)
altronate dehydratase (EC:4.2.1.7)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8RNV0_9CLOT (db=UNIREF evalue=5.3e-12 bit_score=77.4 identity=30.0 coverage=64.64285714285715)
seg (db=Seg db_id=seg from=116 to=127)
seg (db=Seg db_id=seg from=33 to=40)
AMDSBA3_15_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6165..7676)
DNA (1512bp) protein (504aa)
amino acid permease rbh
Uncharacterized amino acid permease YvbW n=9 Tax=Bacillus RepID=YVBW_BACSU (db=UNIREF evalue=4.0e-58 bit_score=231.5 identity=29.4 coverage=85.31746031746032)
transmembrane_regions (db=TMHMM db_id=tmhmm from=249 to=271)
transmembrane_regions (db=TMHMM db_id=tmhmm from=330 to=352)
AMDSBA3_15_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7749..8108)
DNA (360bp) protein (120aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8TZC1_9FIRM (db=UNIREF evalue=3.9e-12 bit_score=76.6 identity=41.7 coverage=75.83333333333333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=84 to=95)
AMDSBA3_15_9
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8537..9958
DNA (1422bp) protein (474aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R980_AMMDK (db=UNIREF evalue=3.4e-19 bit_score=102.1 identity=34.2 coverage=53.58649789029536)
coiled-coil (db=Coil db_id=coil from=251 to=272 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:ACX52859.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Amm
AMDSBA3_15_10
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9955..11148
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5HXG7_9CLOT (db=UNIREF evalue=5.9e-33 bit_score=147.5 identity=32.6 coverage=81.4070351758794)
hypothetical protein
(db=HMMPfam db_id=PF10923 from=189 to=343 evalue=3.2e-14 interpro_id=IPR021228 interpro_description=Protein of unknown function DUF2791)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=52 to=245 evalue=1.1e-07)
AMDSBA3_15_11
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11145..12371
DNA (1227bp) protein (409aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=146 to=167 evalue=NA)
seg (db=Seg db_id=seg from=387 to=400)
seg (db=Seg db_id=seg from=31 to=44)
AMDSBA3_15_12
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

12381..14462
DNA (2082bp) protein (694aa)
conserved hypothetical protein TIGR02653
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0T7_9EURY (db=UNIREF evalue=1.6e-54 bit_score=219.9 identity=26.0 coverage=89.48126801152738)
seg (db=Seg db_id=seg from=217 to=232)
TIGR02688: conserved hypothetical protein T (db=HMMTigr db_id=TIGR02688 from=14 to=477 evalue=1.7e-81 interpro_id=IPR014061 interpro_description=Conserved hypothetical protein CHP02688)
AMDSBA3_15_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14691..15728)
DNA (1038bp) protein (346aa)
beta-lactamase
Beta-lactamase n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J4C5_9PSEU (db=UNIREF evalue=2.3e-33 bit_score=148.7 identity=34.3 coverage=92.48554913294798)
seg (db=Seg db_id=seg from=103 to=114)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=3 to=345 evalue=4.3e-66 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
AMDSBA3_15_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15736..16635)
DNA (900bp) protein (300aa)
BadF/BadG/BcrA/BcrD type ATPase
BadF/BadG/BcrA/BcrD ATPase family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FZN5_9FIRM (db=UNIREF evalue=4.8e-11 bit_score=74.3 identity=34.5 coverage=47.0)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=110 to=291 evalue=9.8e-33)
(db=HMMPfam db_id=PF01869 from=11 to=290 evalue=9.2e-20 interpro_id=IPR002731 interpro_description=ATPase, BadF/BadG/BcrA/BcrD type)
AMDSBA3_15_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16818..18383)
DNA (1566bp) protein (522aa)
glycoside hydrolase family protein
Beta-hexosaminidase n=1 Tax=Bordetella avium 197N RepID=NAGZ_BORA1 (db=UNIREF evalue=2.7e-33 bit_score=149.1 identity=34.5 coverage=51.53256704980843)
no description (db=Gene3D db_id=G3DSA:3.20.20.300 from=11 to=361 evalue=1.2e-98 interpro_id=IPR001764 interpro_description=Glycoside hydrolase, family 3, N-terminal GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolic process (GO:0005975))
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=11 to=347 evalue=2.3e-98 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, superfamily)
AMDSBA3_15_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18411..19565)
DNA (1155bp) protein (385aa)
hypothetical protein
YbbC n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVI2_9EURY (db=UNIREF evalue=1.0e-74 bit_score=286.2 identity=42.4 coverage=98.18181818181819)
seg (db=Seg db_id=seg from=293 to=308)
seg (db=Seg db_id=seg from=97 to=110)
AMDSBA3_15_17
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19571..20269)
DNA (699bp) protein (233aa)
LmbE family protein
LmbE family protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZ95_9BACL (db=UNIREF evalue=3.3e-76 bit_score=290.4 identity=62.9 coverage=95.27896995708154)
LmbE-like (db=superfamily db_id=SSF102588 from=1 to=231 evalue=3.3e-42 interpro_id=IPR024078 interpro_description=Putative deacetylase LmbE-like domain)
(db=HMMPfam db_id=PF02585 from=4 to=124 evalue=1.5e-20 interpro_id=IPR003737 interpro_description=N-acetylglucosaminyl phosphatidylinositol deacetylase)
AMDSBA3_15_18
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20300..21244)
DNA (945bp) protein (315aa)
GCN5-like N-acetyltransferase
Acetyltransferase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZ99_9BACL (db=UNIREF evalue=1.5e-87 bit_score=328.6 identity=48.9 coverage=98.73015873015873)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=164 evalue=6.3e-19 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA3_15_19
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21287..22387)
DNA (1101bp) protein (367aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=142 evalue=4.1e-19 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
seg (db=Seg db_id=seg from=93 to=109)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=139 evalue=1.9e-09 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
(db=HMMPfam db_id=PF00583 from=53 to=129 evalue=1.6e-05 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase (GNAT) domain GO=Molecular Function: N-acetyltransferase activity (GO:0008080))
AMDSBA3_15_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22404..23306)
DNA (903bp) protein (301aa)
N-acetylmuramic acid 6-phosphate etherase rbh
N-acetylmuramic acid 6-phosphate etherase rbh
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Megasphaera micronuciformis F0359 RepID=E2ZBK8_9FIRM (db=UNIREF evalue=1.4e-71 bit_score=275.4 identity=49.8 coverage=96.3455149501661)
GCKR (db=PatternScan db_id=PS01272 from=187 to=204 evalue=0.0 interpro_id=IPR005486 interpro_description=Glucokinase regulatory, conserved site)
AMDSBA3_15_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23350..24213)
DNA (864bp) protein (288aa)
RpiR family transcriptional regulator
Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR9_9FIRM (db=UNIREF evalue=2.1e-19 bit_score=102.1 identity=26.4 coverage=93.75)
seg (db=Seg db_id=seg from=105 to=116)
SIS domain (db=superfamily db_id=SSF53697 from=98 to=278 evalue=7.7e-32)
AMDSBA3_15_22
unknown

Not on your lists

comp(24417..24701)
DNA (285bp) protein (95aa)
seg (db=Seg db_id=seg from=11 to=22)
AMDSBA3_15_23
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

24960..26618
DNA (1659bp) protein (553aa)
family 5 extracellular solute-binding protein
ABC-type transporter, periplasmic subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TSA3_9FIRM (db=UNIREF evalue=9.5e-114 bit_score=416.4 identity=41.1 coverage=96.9258589511754)
seg (db=Seg db_id=seg from=7 to=21)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=35 to=542 evalue=1.6e-94)
AMDSBA3_15_24
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

26712..27707
DNA (996bp) protein (332aa)
binding-protein-dependent transport systems inner membrane component
Dipeptide/oligopeptide/nickel ABC transporter permease n=2 Tax=Amycolatopsis mediterranei RepID=G0FPY6_AMYMD (db=UNIREF evalue=6.4e-89 bit_score=333.2 identity=50.8 coverage=97.59036144578313)
transmembrane_regions (db=TMHMM db_id=tmhmm from=256 to=278)
transmembrane_regions (db=TMHMM db_id=tmhmm from=184 to=206)
AMDSBA3_15_25
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

27707..28555
DNA (849bp) protein (283aa)
binding-protein-dependent transport systems inner membrane component
Probable D,D-dipeptide transport system permease protein ddpC n=332 Tax=Enterobacteriaceae RepID=DDPC_ECOLI (db=UNIREF evalue=5.5e-25 bit_score=120.6 identity=29.7 coverage=96.46643109540636)
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=248 to=270)
AMDSBA3_15_26
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

28557..29522
DNA (966bp) protein (322aa)
peptide ABC transporter ATPase
Oligopeptide ABC transporter ATP-binding protein n=2 Tax=Bacillaceae RepID=A3I7X8_9BACI (db=UNIREF evalue=1.8e-56 bit_score=225.3 identity=43.0 coverage=86.95652173913044)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=313 evalue=2.0e-132)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=149 to=163 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
AMDSBA3_15_27
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29515..30507
DNA (993bp) protein (331aa)
oligopeptide/dipeptide ABC transporter, ATPase subunit
ABC transporter nucleotide binding/ATPase protein (Oligopeptide) n=1 Tax=Agrobacterium vitis S4 RepID=B9K1I6_AGRVS (db=UNIREF evalue=3.5e-47 bit_score=194.5 identity=37.0 coverage=95.77039274924472)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=6 to=321 evalue=1.6e-114)
seg (db=Seg db_id=seg from=188 to=203)
AMDSBA3_15_28
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30657..31883
DNA (1227bp) protein (409aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=373 to=395)
transmembrane_regions (db=TMHMM db_id=tmhmm from=344 to=366)
transmembrane_regions (db=TMHMM db_id=tmhmm from=307 to=324)
transmembrane_regions (db=TMHMM db_id=tmhmm from=281 to=300)
AMDSBA3_15_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32007..33206
DNA (1200bp) protein (400aa)
anmK; anhydro-N-acetylmuramic acid kinase
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=ANMK_PSEA6 (db=UNIREF evalue=4.1e-50 bit_score=204.5 identity=35.6 coverage=89.0)
seg (db=Seg db_id=seg from=58 to=68)
(db=HMMPfam db_id=PF03702 from=10 to=387 evalue=1.4e-103 interpro_id=IPR005338 interpro_description=Anhydro-N-acetylmuramic acid kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: amino sugar metabolic process (GO:0006040), Biological Process: peptidoglycan turnover (GO:0009254), Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773))
AMDSBA3_15_30
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33301..33783
DNA (483bp) protein (161aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=3 to=156 evalue=5.0e-27 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=143 evalue=3.3e-20 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
(db=HMMPfam db_id=PF00583 from=61 to=132 evalue=5.4e-14 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase (GNAT) domain GO=Molecular Function: N-acetyltransferase activity (GO:0008080))
N-TERMINAL ACETYLTRANSFERASE (db=HMMPanther db_id=PTHR23091 from=61 to=141 evalue=6.5e-07)
Displaying items 1-30 of 57 in total

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