ggKbase home page

AMDSBA3_15_24

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 26712..27707

Top 3 Functional Annotations

Value Algorithm Source
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 326.0
  • Bit_score: 381
  • Evalue 2.50e-103
Dipeptide/oligopeptide/nickel ABC transporter permease n=2 Tax=Amycolatopsis mediterranei RepID=G0FPY6_AMYMD (db=UNIREF evalue=6.4e-89 bit_score=333.2 identity=50.8 coverage=97.59036144578313) similarity UNIREF
DB: UNIREF
  • Identity: 50.8
  • Coverage: 97.59
  • Bit_score: 333
  • Evalue 6.40e-89
transmembrane_regions (db=TMHMM db_id=tmhmm from=256 to=278) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidimicrobium ferrooxidans → Acidimicrobium → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGCGTTATTTAATTCGACGTGGGTCGATGTTGCTGTTGACACTGTGGTCCGCAATCACACTCAACTTCCTGCTACCACGACTGATGCCTGGAAATCCTGCCGAAGTAATGCTCGCGAAGTTTAAGGGCAAGGGAAATATGGGCCCACAAGCGATTTATGCGATCAAAGTAATGTTGGGCATTACCAACGAAAGTCTTTGGCACCAGTACTTGCAATATTGGGGCGAGATATTTCACTTTAACTTCGGGATATCGTACACATACTTTCCGTACTCGGTCACGCATATGATTGCGCAAGCGCTTCCCTGGACACTGGTTCTCATTGGTGTTACGACTGTGTTAAGTTTTCTCATTGGCACGGGTTTTGGGATCTGGGCGGCTTGGACGCGTGGCTCCTGGTTTGATATGAGCGTCACGTCCATTTTTACATTTACGTCGTCCTTTCCTTATTTTTGGTTTGCGATGATTGTGGTCTTTATCTTGGCATTTACATTTCAAGTATTTCCTAATAGCGGCGGTTATGCGACGCAAATGGTGCCTGGATTCAATATGGCATTTTTAGGCAGCGCAATCTATCATTCGATTTTGCCTGCGCTCACAATTTTGGTGAGCTCCTTAGGCGGCTGGCAGTTGCAGATGCGCAACAATATGATTGCAGCGCTCAATGAAGATTATGTGGTGTTGGCCCGGGCCAAGGGTTTACCGCAACGCGTGCTGGCTATGGGTTATGCAGCCCGTAATGCCATTTTGCCGAACATGACGAGCTTTGCCATGTCCCTTGGATTCGTGGTCAGCGGGGCCATTCTCGTAGAGTTGGTGTTTAGCTACCCCGGCATGGGCAGCTTGCTCTACAATGCGGTGTCGAACGAAGACTATCCACTTATGCAGGGTATTTTCCTCATGATCGTCGTGTGTGTGGTTGCCGCCAATCTGGTCGCGGATATTGTGAATGTCGCCTTGGATCCGCGAATTCGCCGAGGAGGTGGCGAAGCGTGA
PROTEIN sequence
Length: 332
MRYLIRRGSMLLLTLWSAITLNFLLPRLMPGNPAEVMLAKFKGKGNMGPQAIYAIKVMLGITNESLWHQYLQYWGEIFHFNFGISYTYFPYSVTHMIAQALPWTLVLIGVTTVLSFLIGTGFGIWAAWTRGSWFDMSVTSIFTFTSSFPYFWFAMIVVFILAFTFQVFPNSGGYATQMVPGFNMAFLGSAIYHSILPALTILVSSLGGWQLQMRNNMIAALNEDYVVLARAKGLPQRVLAMGYAARNAILPNMTSFAMSLGFVVSGAILVELVFSYPGMGSLLYNAVSNEDYPLMQGIFLMIVVCVVAANLVADIVNVALDPRIRRGGGEA*