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AMDSBA3_22

Alias: AMDSBA3_C21

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Displaying items 31-52 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_22_31
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25566..28193)
DNA (2628bp) protein (876aa)
valyl-tRNA synthetase (EC:6.1.1.9) rbh
valyl-tRNA synthetase (EC:6.1.1.9) rbh
Valine--tRNA ligase n=1 Tax=Desulfotalea psychrophila LSv54 RepID=SYV_DESPS (db=UNIREF evalue=1.5e-222 bit_score=778.5 identity=44.6 coverage=99.54337899543378)
coiled-coil (db=Coil db_id=coil from=850 to=871 evalue=NA)
AMDSBA3_22_32
unknown

Not on your lists

28303..28611
DNA (309bp) protein (103aa)
28303..28611 + ( gc_cont=0.566)
AMDSBA3_22_33
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28571..28834)
DNA (264bp) protein (88aa)
10 kDa chaperonin
10 kDa chaperonin 1 n=3 Tax=Bradyrhizobium japonicum RepID=CH101_BRAJA (db=UNIREF evalue=6.5e-17 bit_score=92.0 identity=48.4 coverage=97.72727272727273)
CHAPERONINS_CPN10 (db=PatternScan db_id=PS00681 from=3 to=27 evalue=0.0 interpro_id=IPR018369 interpro_description=Chaperonin Cpn10, conserved site GO=Molecular Function: ATP binding (GO:0005524), Biological Process: protein folding (GO:0006457))
no description (db=HMMSmart db_id=SM00883 from=2 to=86 evalue=1.7e-42 interpro_id=IPR020818 interpro_description=Chaperonin Cpn10 GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
AMDSBA3_22_34
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28974..29909
DNA (936bp) protein (312aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0G2_9FIRM (db=UNIREF evalue=3.0e-48 bit_score=198.0 identity=37.5 coverage=94.55128205128204)
seg (db=Seg db_id=seg from=8 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA3_22_35
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29795..31072)
DNA (1278bp) protein (426aa)
transposase IS605 OrfB family
Putative transposase IS891/IS1136/IS1341 family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJY9_9CHLR (db=UNIREF evalue=4.7e-52 bit_score=211.1 identity=40.5 coverage=66.90140845070422)
coiled-coil (db=Coil db_id=coil from=227 to=248 evalue=NA)
coiled-coil (db=Coil db_id=coil from=203 to=224 evalue=NA)
AMDSBA3_22_36
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31075..31368)
DNA (294bp) protein (98aa)
transposase
Transposase n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C9W9_9CREN (db=UNIREF evalue=6.0e-11 bit_score=72.4 identity=37.4 coverage=90.81632653061224)
(db=HMMPfam db_id=PF01797 from=2 to=94 evalue=3.7e-28 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
Transposase IS200-like (db=superfamily db_id=SSF143422 from=2 to=95 evalue=8.0e-25 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
AMDSBA3_22_37
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(31940..32143)
DNA (204bp) protein (68aa)
RelE-like (db=superfamily db_id=SSF143011 from=1 to=67 evalue=1.6e-10)
Uncharacterized protein {ECO:0000313|EMBL:CCI21570.1}; TaxID=1160285 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9809.;"
Addiction module toxin, RelE/StbE family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8M8_9BACT
addiction module toxin component, YafQ family/addiction module toxin, RelE/StbE family
AMDSBA3_22_38
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32140..32397)
DNA (258bp) protein (86aa)
putative addiction module antitoxin, RelB/DinJ family
RelB_DinJ: addiction module antitoxin, RelB (db=HMMTigr db_id=TIGR02384 from=1 to=83 evalue=8.3e-18 interpro_id=IPR007337 interpro_description=RelB antitoxin)
(db=HMMPfam db_id=PF04221 from=6 to=72 evalue=5.7e-17 interpro_id=IPR007337 interpro_description=RelB antitoxin)
Putative addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:AHG66185.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Adv
AMDSBA3_22_39
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33246..33458
DNA (213bp) protein (71aa)
transposase IS111A/IS1328/IS1533
Transposase IS111A/IS1328/IS1533 n=2 Tax=Sulfobacillus acidophilus RepID=G8TU27_9FIRM (db=UNIREF evalue=4.5e-24 bit_score=115.5 identity=77.1 coverage=95.77464788732394)
seg (db=Seg db_id=seg from=36 to=50)
Transposase-like protein {ECO:0000313|EMBL:AEJ40217.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulf
AMDSBA3_22_40
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34199..34774)
DNA (576bp) protein (192aa)
GCN5-related N-acetyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLX7_9CHLR (db=UNIREF evalue=2.2e-09 bit_score=68.2 identity=30.8 coverage=77.60416666666666)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=169 evalue=4.9e-30 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=5 to=172 evalue=4.7e-25 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
(db=HMMPfam db_id=PF00583 from=67 to=145 evalue=9.5e-13 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase (GNAT) domain GO=Molecular Function: N-acetyltransferase activity (GO:0008080))
AMDSBA3_22_41
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35003..35599
DNA (597bp) protein (199aa)
phosphoglycerate mutase
Phosphoglycerate mutase n=2 Tax=Sulfobacillus acidophilus RepID=G8U0W1_9FIRM (db=UNIREF evalue=6.3e-68 bit_score=262.7 identity=62.6 coverage=98.49246231155779)
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=8 to=198 evalue=1.9e-20)
(db=HMMPfam db_id=PF00300 from=8 to=166 evalue=2.4e-12 interpro_id=IPR013078 interpro_description=Histidine phosphatase superfamily, clade-1)
AMDSBA3_22_42
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35596..36186)
DNA (591bp) protein (197aa)
GTP-binding protein engB
Probable GTP-binding protein EngB n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3D041_9BACT (db=UNIREF evalue=4.0e-22 bit_score=110.5 identity=37.4 coverage=91.37055837563452)
GTPase_YsxC: ribosome biogenesis GTP-bind (db=HMMTigr db_id=TIGR03598 from=12 to=190 evalue=6.1e-61 interpro_id=IPR019987 interpro_description=GTP-binding protein, ribosome biogenesis, YsxC GO=Biological Process: barrier septum assembly (GO:0000917), Molecular Function: GTP binding (GO:0005525))
MSS1/TRME-RELATED GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR11649 from=24 to=193 evalue=2.6e-50)
AMDSBA3_22_43
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(36186..38516)
DNA (2331bp) protein (777aa)
ATP-dependent proteinase (EC:3.4.21.53)
ATP-dependent proteinase (EC:3.4.21.53)
ATP-dependent protease La n=1 Tax=gamma proteobacterium HIMB30 RepID=UPI000262CAF0 (db=UNIREF evalue=1.4e-219 bit_score=768.5 identity=51.0 coverage=98.71299871299871)
seg (db=Seg db_id=seg from=238 to=252)
AMDSBA3_22_44
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(38580..40271)
DNA (1692bp) protein (564aa)
anti-sigma H sporulation factor LonB (EC:3.4.21.53) rbh
anti-sigma H sporulation factor LonB (EC:3.4.21.53) rbh
Lon protease 2 n=21 Tax=Bacillus RepID=LON2_BACSU (db=UNIREF evalue=5.7e-199 bit_score=699.5 identity=63.1 coverage=94.8581560283688)
AMDSBA3_22_45
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40401..42101)
DNA (1701bp) protein (567aa)
adenylyl-sulfate kinase (EC:2.7.1.25 2.7.7.4)
Putative uncharacterized protein n=1 Tax=Aureococcus anophagefferens RepID=F0Y2W6_AURAN (db=UNIREF evalue=5.3e-43 bit_score=181.4 identity=34.3 coverage=61.022927689594354)
seg (db=Seg db_id=seg from=451 to=460)
(db=HMMPfam db_id=PF01747 from=47 to=372 evalue=3.7e-85 interpro_id=IPR002650 interpro_description=Sulphate adenylyltransferase GO=Biological Process: sulfate assimilation (GO:0000103), Molecular Function: sulfate adenylyltransferase (ATP) activity (GO:0004781))
AMDSBA3_22_46
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

42253..43113
DNA (861bp) protein (287aa)
sulfotransferase
Sulfotransferase domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQI1_HALO1 (db=UNIREF evalue=1.4e-31 bit_score=142.5 identity=31.5 coverage=96.16724738675958)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=2 to=283 evalue=5.4e-68)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=2 to=283 evalue=6.7e-54)
AMDSBA3_22_47
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43177..44454)
DNA (1278bp) protein (426aa)
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Symbiobacterium thermophilum IAM 14863 RepID=CLPX_SYMTH (db=UNIREF evalue=4.3e-199 bit_score=699.5 identity=80.8 coverage=99.29577464788733)
seg (db=Seg db_id=seg from=250 to=264)
AMDSBA3_22_48
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44503..45117)
DNA (615bp) protein (205aa)
clpP; ATP-dependent Clp protease, proteolytic subunit ClpP rbh
ATP-dependent Clp protease proteolytic subunit 2 n=2 Tax=Corynebacterium efficiens YS-314 RepID=CLPP2_COREF (db=UNIREF evalue=1.8e-49 bit_score=201.4 identity=53.7 coverage=84.39024390243902)
CLP_PROTEASE_SER (db=PatternScan db_id=PS00381 from=91 to=102 evalue=0.0 interpro_id=IPR018215 interpro_description=Peptidase S14, ClpP, active site GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
(db=HMMPfam db_id=PF00574 from=14 to=194 evalue=2.1e-78 interpro_id=IPR001907 interpro_description=Peptidase S14, ClpP GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
AMDSBA3_22_49
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45136..46452)
DNA (1317bp) protein (439aa)
tig; trigger factor rbh
Trigger factor n=2 Tax=Desulfotalea psychrophila LSv54 RepID=TIG_DESPS (db=UNIREF evalue=3.9e-46 bit_score=191.4 identity=26.8 coverage=97.03872437357631)
seg (db=Seg db_id=seg from=80 to=91)
coiled-coil (db=Coil db_id=coil from=322 to=343 evalue=NA)
AMDSBA3_22_50

Not on your lists

47155..47421
DNA (267bp) protein (89aa)
47155..47421 + ( gc_cont=0.536)
Marine sediment metagenome DNA, contig: S01H1_S31530 {ECO:0000313|EMBL:GAG28757.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
AMDSBA3_22_51
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47418..48779
DNA (1362bp) protein (454aa)
Cl-channel voltage-gated family protein
Cl-channel voltage-gated family protein
Cl-channel voltage-gated family protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUA8_9FIRM (db=UNIREF evalue=4.6e-175 bit_score=619.8 identity=70.3 coverage=95.59471365638767)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=243)
AMDSBA3_22_52
unknown

Not on your lists

comp(49080..49769)
DNA (690bp) protein (230aa)
seg (db=Seg db_id=seg from=211 to=222)
seg (db=Seg db_id=seg from=70 to=87)
transmembrane_regions (db=TMHMM db_id=tmhmm from=201 to=218)
transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=196)
Displaying items 31-52 of 52 in total

View Taxonomy