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AMDSBA3_22

Alias: AMDSBA3_C21

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_22_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(304..996)
DNA (693bp) protein (231aa)
short-chain dehydrogenase/reductase SDR
Probable short-chain dehydrogenase/reductase n=1 Tax=Bordetella avium 197N RepID=Q2KYM8_BORA1 (db=UNIREF evalue=5.5e-15 bit_score=87.0 identity=36.7 coverage=74.02597402597402)
seg (db=Seg db_id=seg from=132 to=146)
ADH_SHORT (db=PatternScan db_id=PS00061 from=124 to=152 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
AMDSBA3_22_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1102..2895
DNA (1794bp) protein (598aa)
hypothetical protein rbh
Thymidylate kinase n=1 Tax=Pyrobaculum sp. 1860 RepID=G7VH32_9CREN (db=UNIREF evalue=9.8e-56 bit_score=223.8 identity=38.3 coverage=48.32775919732442)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR12145 from=14 to=580 evalue=4.5e-76)
(db=HMMPfam db_id=PF03190 from=16 to=139 evalue=1.0e-36 interpro_id=IPR004879 interpro_description=Domain of unknown function DUF255)
AMDSBA3_22_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2946..4418)
DNA (1473bp) protein (491aa)
ferredoxin-dependent glutamate synthase
ferredoxin-dependent glutamate synthase
Ferredoxin-dependent glutamate synthase n=2 Tax=Sulfobacillus acidophilus RepID=G8U0W4_9FIRM (db=UNIREF evalue=2.6e-99 bit_score=368.2 identity=44.3 coverage=91.44602851323829)
AMDSBA3_22_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4610..5788
DNA (1179bp) protein (393aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=4 to=328 evalue=6.9e-27)
no description (db=Gene3D db_id=G3DSA:3.50.50.60 from=2 to=328 evalue=8.4e-25)
NADH DEHYDROGENASE-RELATED (db=HMMPanther db_id=PTHR22915 from=1 to=363 evalue=3.6e-18)
AMDSBA3_22_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5849..6205)
DNA (357bp) protein (119aa)
iojap family protein
Iojap-like ribosome-associated protein n=2 Tax=Micrococcus luteus RepID=D3LKT8_MICLU (db=UNIREF evalue=2.7e-13 bit_score=80.5 identity=39.8 coverage=84.87394957983193)
seg (db=Seg db_id=seg from=4 to=12)
iojap_ybeB: iojap-like ribosome-associated (db=HMMTigr db_id=TIGR00090 from=3 to=101 evalue=6.3e-40 interpro_id=IPR004394 interpro_description=Ribosome-associated, Iojap-like)
AMDSBA3_22_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6232..6789)
DNA (558bp) protein (186aa)
metal dependent phosphohydrolase
Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXG2_9CLOT (db=UNIREF evalue=1.8e-08 bit_score=65.1 identity=28.5 coverage=90.32258064516128)
TIGR00488: putative HD superfamily hydrolas (db=HMMTigr db_id=TIGR00488 from=6 to=177 evalue=2.8e-21 interpro_id=IPR005249 interpro_description=Conserved hypothetical protein CHP00488)
Metal dependent phosphohydrolase n=2 Tax=Sulfobacillus acidophilus RepID=F8I8G0_SULAT
AMDSBA3_22_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6920..7177)
DNA (258bp) protein (86aa)
RNP-1 like RNA-binding protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0A0_9FIRM (db=UNIREF evalue=2.8e-36 bit_score=156.4 identity=90.6 coverage=97.67441860465115)
RNP-1 like RNA-binding protein
seg (db=Seg db_id=seg from=49 to=62)
GLYCINE-RICH RNA-BINDING PROTEIN (db=HMMPanther db_id=PTHR10432:SF31 from=4 to=84 evalue=2.8e-31)
AMDSBA3_22_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7605..8306)
DNA (702bp) protein (234aa)
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18) rbh
Probable nicotinate-nucleotide adenylyltransferase n=2 Tax=unclassified Lachnospiraceae RepID=F3AI76_9FIRM (db=UNIREF evalue=5.6e-31 bit_score=140.2 identity=37.8 coverage=82.47863247863248)
TIGR00482: nicotinate (nicotinamide) nuc (db=HMMTigr db_id=TIGR00482 from=30 to=223 evalue=1.3e-71 interpro_id=IPR005248 interpro_description=Probable nicotinate-nucleotide adenylyltransferase GO=Biological Process: NAD biosynthetic process (GO:0009435), Molecular Function: nucleotidyltransferase activity (GO:0016779))
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=21 to=223 evalue=3.9e-62 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
AMDSBA3_22_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8296..9579)
DNA (1284bp) protein (428aa)
GTPase ObgE rbh
GTPase ObgE rbh
GTPase obg n=1 Tax=Singulisphaera acidiphila DSM 18658 RepID=H1N340_9PLAN (db=UNIREF evalue=9.7e-98 bit_score=362.8 identity=53.2 coverage=79.90654205607477)
seg (db=Seg db_id=seg from=329 to=342)
AMDSBA3_22_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9592..10212)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0A4_9FIRM (db=UNIREF evalue=5.6e-51 bit_score=206.5 identity=51.3 coverage=91.30434782608695)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=42)
seg (db=Seg db_id=seg from=79 to=93)
AMDSBA3_22_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10227..10505)
DNA (279bp) protein (93aa)
50S ribosomal protein L27P
50S ribosomal protein L27 n=8 Tax=Caldicellulosiruptor RepID=RL27_ANATD (db=UNIREF evalue=5.8e-24 bit_score=115.5 identity=62.5 coverage=92.47311827956989)
seg (db=Seg db_id=seg from=12 to=23)
RIBOSOMAL_L27 (db=PatternScan db_id=PS00831 from=40 to=54 evalue=0.0 interpro_id=IPR018261 interpro_description=Ribosomal protein L27, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
AMDSBA3_22_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10527..10853)
DNA (327bp) protein (109aa)
seg (db=Seg db_id=seg from=8 to=16)
(db=HMMPfam db_id=PF04327 from=1 to=99 evalue=3.5e-16 interpro_id=IPR007422 interpro_description=Protein of unknown function DUF464)
Hypothetical protein TM1457 (db=superfamily db_id=SSF118010 from=1 to=108 evalue=1.3e-14)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I8F3_SULAT
AMDSBA3_22_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10850..11167)
DNA (318bp) protein (106aa)
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 n=2 Tax=Caulobacter crescentus CB15 RepID=RL21_CAUCR (db=UNIREF evalue=3.4e-20 bit_score=103.2 identity=50.0 coverage=94.33962264150944)
seg (db=Seg db_id=seg from=85 to=98)
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=2 to=103 evalue=1.8e-45 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
AMDSBA3_22_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11366..13273)
DNA (1908bp) protein (636aa)
rng; ribonuclease rbh
rng; ribonuclease rbh
Ribonuclease n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYM8_9CLOT (db=UNIREF evalue=7.2e-49 bit_score=201.1 identity=30.5 coverage=55.503144654088054)
seg (db=Seg db_id=seg from=206 to=222)
AMDSBA3_22_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13375..14247)
DNA (873bp) protein (291aa)
spoIVFB; peptidase M50
Peptidase M50 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNV5_9EURY (db=UNIREF evalue=7.4e-17 bit_score=93.6 identity=30.9 coverage=74.5704467353952)
seg (db=Seg db_id=seg from=115 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=193)
AMDSBA3_22_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14249..14899)
DNA (651bp) protein (217aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0D6_9FIRM (db=UNIREF evalue=1.3e-13 bit_score=82.4 identity=37.5 coverage=57.6036866359447)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I8B9_SULAT
AMDSBA3_22_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14953..15813)
DNA (861bp) protein (287aa)
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase n=2 Tax=Sulfobacillus acidophilus RepID=G8U0D8_9FIRM (db=UNIREF evalue=1.5e-126 bit_score=458.0 identity=75.2 coverage=99.30313588850174)
AMDSBA3_22_18
unknown

Not on your lists

comp(15850..16026)
DNA (177bp) protein (59aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
AMDSBA3_22_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16134..16751)
DNA (618bp) protein (206aa)
phosphoesterase PA-phosphatase-like protein rbh
PAP2 family protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12U33_METBU (db=UNIREF evalue=1.3e-07 bit_score=62.4 identity=26.6 coverage=66.99029126213593)
transmembrane_regions (db=TMHMM db_id=tmhmm from=65 to=87)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
AMDSBA3_22_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16748..18043)
DNA (1296bp) protein (432aa)
rodA; rod shape-determining protein RodA rbh
Rod shape-determining membrane protein; cell elongation n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K4B8_HAMD5 (db=UNIREF evalue=9.5e-61 bit_score=240.0 identity=36.1 coverage=81.48148148148148)
transmembrane_regions (db=TMHMM db_id=tmhmm from=272 to=294)
transmembrane_regions (db=TMHMM db_id=tmhmm from=304 to=326)
AMDSBA3_22_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18091..18357)
DNA (267bp) protein (89aa)
cell division topological specificity factor MinE
Cell division topological specificity factor 2 n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=MINE2_SYNWW (db=UNIREF evalue=1.1e-16 bit_score=91.3 identity=51.2 coverage=89.8876404494382)
(db=HMMPfam db_id=PF03776 from=15 to=82 evalue=2.8e-24 interpro_id=IPR005527 interpro_description=Septum formation topological specificity factor MinE GO=Biological Process: regulation of barrier septum assembly (GO:0032955), Biological Process: cell division (GO:0051301))
minE: cell division topological specificity (db=HMMTigr db_id=TIGR01215 from=2 to=82 evalue=3.9e-23 interpro_id=IPR005527 interpro_description=Septum formation topological specificity factor MinE GO=Biological Process: regulation of barrier septum assembly (GO:0032955), Biological Process: cell division (GO:0051301))
AMDSBA3_22_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18375..19178)
DNA (804bp) protein (268aa)
septum site-determining protein MinD
septum site-determining protein MinD
Septum site-determining protein MinD n=2 Tax=Sulfobacillus acidophilus RepID=G8U0E4_9FIRM (db=UNIREF evalue=2.4e-126 bit_score=457.2 identity=87.6 coverage=98.88059701492537)
AMDSBA3_22_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19234..19770)
DNA (537bp) protein (179aa)
minC; septum formation inhibitor MinC
Probable septum site-determining protein MinC n=4 Tax=Nostocaceae RepID=MINC_NOSS1 (db=UNIREF evalue=7.8e-17 bit_score=92.8 identity=36.9 coverage=84.91620111731844)
Cell-division inhibitor MinC, C-terminal domain (db=superfamily db_id=SSF63848 from=58 to=169 evalue=1.1e-31 interpro_id=IPR005526 interpro_description=Septum formation inhibitor MinC, C-terminal GO=Biological Process: cell morphogenesis (GO:0000902))
no description (db=Gene3D db_id=G3DSA:2.160.20.70 from=59 to=173 evalue=5.0e-29 interpro_id=IPR016098 interpro_description=Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO=Biological Process: cell morphogenesis (GO:0000902))
AMDSBA3_22_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19930..20445)
DNA (516bp) protein (172aa)
rod shape-determining protein MreD
Rod shape-determining protein MreD n=2 Tax=Sulfobacillus acidophilus RepID=G8U0E6_9FIRM (db=UNIREF evalue=1.0e-61 bit_score=241.9 identity=66.5 coverage=96.51162790697676)
seg (db=Seg db_id=seg from=100 to=114)
seg (db=Seg db_id=seg from=53 to=62)
AMDSBA3_22_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20445..21314)
DNA (870bp) protein (290aa)
Rod shape-determining protein MreC n=2 Tax=Sulfobacillus acidophilus RepID=G8U0E7_9FIRM (db=UNIREF evalue=5.0e-106 bit_score=389.8 identity=64.9 coverage=98.9655172413793)
rod shape-determining protein MreC
rod shape-determining protein MreC
AMDSBA3_22_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21457..22482)
DNA (1026bp) protein (342aa)
rod shape-determining protein MreB rbh
rod shape-determining protein MreB rbh
Rod shape-determining protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZBN4_NODSP (db=UNIREF evalue=4.7e-103 bit_score=380.2 identity=56.9 coverage=94.73684210526315)
AMDSBA3_22_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22499..23164)
DNA (666bp) protein (222aa)
radC; DNA repair protein RadC rbh
UPF0758 protein LMHCC_1020 n=36 Tax=Listeria RepID=Y1020_LISMH (db=UNIREF evalue=4.5e-38 bit_score=163.7 identity=39.8 coverage=94.14414414414415)
seg (db=Seg db_id=seg from=155 to=166)
UPF0758 (db=PatternScan db_id=PS01302 from=167 to=172 evalue=0.0 interpro_id=IPR020891 interpro_description=Uncharacterised protein family UPF0758, conserved site)
AMDSBA3_22_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23279..23836)
DNA (558bp) protein (186aa)
maf; maf protein
Maf-like protein Saro_1057 n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Y1057_NOVAD (db=UNIREF evalue=2.1e-20 bit_score=104.8 identity=40.6 coverage=93.54838709677419)
ITPase-like (db=superfamily db_id=SSF52972 from=1 to=170 evalue=1.2e-47)
no description (db=Gene3D db_id=G3DSA:3.90.950.10 from=1 to=174 evalue=3.9e-46)
AMDSBA3_22_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23886..24152)
DNA (267bp) protein (89aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0F1_9FIRM (db=UNIREF evalue=5.4e-19 bit_score=99.0 identity=43.0 coverage=95.50561797752809)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
AMDSBA3_22_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24292..25569)
DNA (1278bp) protein (426aa)
folC; hypothetical protein
FolC bifunctional protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP48_9FIRM (db=UNIREF evalue=1.8e-51 bit_score=209.1 identity=35.3 coverage=93.89671361502347)
FOLYLPOLYGLU_SYNT_2 (db=PatternScan db_id=PS01012 from=132 to=147 evalue=0.0 interpro_id=IPR018109 interpro_description=Folylpolyglutamate synthetase, conserved site GO=Molecular Function: tetrahydrofolylpolyglutamate synthase activity (GO:0004326), Molecular Function: ATP binding (GO:0005524), Biological Process: folic acid-containing compound biosynthetic process (GO:0009396))
folC: bifunctional protein FolC (db=HMMTigr db_id=TIGR01499 from=18 to=412 evalue=6.8e-118 interpro_id=IPR001645 interpro_description=Folylpolyglutamate synthetase GO=Molecular Function: tetrahydrofolylpolyglutamate synthase activity (GO:0004326), Molecular Function: ATP binding (GO:0005524), Biological Process: folic acid-containing compound biosynthetic process (GO:0009396))
Displaying items 1-30 of 52 in total

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