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AMDSBA3_32

Alias: AMDSBA3_C31

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Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_32_1
unknown

Not on your lists

comp(1..168)
DNA (168bp) protein (56aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
AMDSBA3_32_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(477..2225)
DNA (1749bp) protein (583aa)
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8U1I7_9FIRM (db=UNIREF evalue=2.4e-160 bit_score=571.2 identity=50.4 coverage=94.33962264150944)
seg (db=Seg db_id=seg from=490 to=501)
seg (db=Seg db_id=seg from=160 to=176)
AMDSBA3_32_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2585..3313)
DNA (729bp) protein (243aa)
Creatininase n=2 Tax=Sulfobacillus acidophilus RepID=G8TXM3_9FIRM (db=UNIREF evalue=8.8e-80 bit_score=302.4 identity=57.4 coverage=99.1769547325103)
creatininase
(db=HMMPfam db_id=PF02633 from=3 to=231 evalue=2.2e-54 interpro_id=IPR003785 interpro_description=Creatininase/formamide hydrolase)
Creatininase (db=superfamily db_id=SSF102215 from=1 to=235 evalue=1.7e-51 interpro_id=IPR024087 interpro_description=Creatininase-like domain)
AMDSBA3_32_4
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3638..4204)
DNA (567bp) protein (189aa)
ATP/cobalamin adenosyltransferase
ATP:cob(I)alamin adenosyltransferase n=4 Tax=Streptomyces RepID=B5GI15_9ACTO (db=UNIREF evalue=9.7e-26 bit_score=122.5 identity=44.6 coverage=94.17989417989418)
seg (db=Seg db_id=seg from=126 to=145)
PduO_Nterm: ATP:cob(I)alamin adenosyltrans (db=HMMTigr db_id=TIGR00636 from=4 to=181 evalue=2.4e-57 interpro_id=IPR017858 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: cob(I)yrinic acid a,c-diamide adenosyltransferase activity (GO:0008817), Biological Process: cobalamin biosynthetic process (GO:0009236))
AMDSBA3_32_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4201..5988)
DNA (1788bp) protein (596aa)
cobU; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=D5ST98_PLAL2 (db=UNIREF evalue=3.2e-51 bit_score=208.8 identity=39.8 coverage=55.369127516778526)
seg (db=Seg db_id=seg from=247 to=258)
seg (db=Seg db_id=seg from=268 to=286)
AMDSBA3_32_6
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5988..6770)
DNA (783bp) protein (261aa)
periplasmic binding protein
substrate-binding protein n=1 Tax=Pseudomonas sp. S9 RepID=UPI000255707B (db=UNIREF evalue=1.3e-44 bit_score=185.7 identity=42.3 coverage=97.70114942528735)
"Helical backbone" metal receptor (db=superfamily db_id=SSF53807 from=4 to=256 evalue=2.7e-46)
(db=HMMPfam db_id=PF01497 from=8 to=236 evalue=8.2e-40 interpro_id=IPR002491 interpro_description=ABC transporter, periplasmic binding protein GO=Molecular Function: binding (GO:0005488))
AMDSBA3_32_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6754..8292)
DNA (1539bp) protein (513aa)
cobalamin biosynthesis protein CobQ
cobalamin biosynthesis protein CobQ
Cobyric acid synthase n=8 Tax=Bacteroides RepID=COBQ_BACFN (db=UNIREF evalue=2.0e-105 bit_score=388.7 identity=43.0 coverage=94.15204678362574)
seg (db=Seg db_id=seg from=149 to=160)
AMDSBA3_32_8
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8277..9386)
DNA (1110bp) protein (370aa)
AA_TRANSFER_CLASS_1 (db=PatternScan db_id=PS00105 from=214 to=227 evalue=0.0 interpro_id=IPR004838 interpro_description=Aminotransferases, class-I, pyridoxal-phosphate-binding site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: biosynthetic process (GO:0009058), Molecular Function: pyridoxal phosphate binding (GO:0030170))
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=3 to=359 evalue=7.5e-73 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (db=HMMPanther db_id=PTHR11751:SF3 from=40 to=361 evalue=1.2e-56)
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=40 to=361 evalue=1.2e-56)
AMDSBA3_32_9
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9376..10137)
DNA (762bp) protein (254aa)
hypothetical protein
Cobalamin synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLB8_9FIRM (db=UNIREF evalue=1.4e-27 bit_score=129.0 identity=33.7 coverage=95.66929133858267)
transmembrane_regions (db=TMHMM db_id=tmhmm from=201 to=219)
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=251)
AMDSBA3_32_10
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10134..11093)
DNA (960bp) protein (320aa)
cobalamin biosynthesis protein
Cobalamin biosynthesis protein CobD n=9 Tax=Yersinia RepID=COBD_YERE8 (db=UNIREF evalue=8.3e-62 bit_score=243.0 identity=43.4 coverage=95.9375)
transmembrane_regions (db=TMHMM db_id=tmhmm from=296 to=318)
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=103)
AMDSBA3_32_11
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11087..11881)
DNA (795bp) protein (265aa)
adenosylcobinamide kinase (EC:2.7.1.156)
Cobalbumin biosynthesis protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=D3RU94_ALLVD (db=UNIREF evalue=6.3e-15 bit_score=87.0 identity=32.0 coverage=64.52830188679245)
(db=HMMPfam db_id=PF02283 from=88 to=257 evalue=2.0e-56 interpro_id=IPR003203 interpro_description=Cobinamide kinase/cobinamide phosphate guanyltransferase GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: adenosylcobinamide kinase activity (GO:0043752), Biological Process: cofactor biosynthetic process (GO:0051188))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=87 to=258 evalue=2.9e-52)
AMDSBA3_32_12
Jeotgalibacillus sp. D5, Jeotgalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12145..13509)
DNA (1365bp) protein (455aa)
cobyrinic acid a,c-diamide synthase (EC:6.3.3.3)
cobyrinic acid a,c-diamide synthase (EC:6.3.3.3)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HLW9_CYAP4 (db=UNIREF evalue=3.0e-81 bit_score=308.1 identity=41.1 coverage=97.36263736263736)
AMDSBA3_32_13
Planococcus halocryophilus, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13717..14955)
DNA (1239bp) protein (413aa)
peptidase M20 family protein
N-acyl-L-amino acid amidohydrolase n=4 Tax=Bacillus RepID=C2W9N7_BACCE (db=UNIREF evalue=7.7e-68 bit_score=263.5 identity=39.5 coverage=89.34624697336562)
seg (db=Seg db_id=seg from=159 to=165)
Predicted amidohydrolase, ACY1L2 like (db=HMMPIR db_id=PIRSF037226 from=27 to=408 evalue=3.1e-142 interpro_id=IPR017144 interpro_description=Peptidase M20D, amidohydrolase, predicted)
AMDSBA3_32_14
unknown

Not on your lists

comp(15052..16383)
DNA (1332bp) protein (444aa)
seg (db=Seg db_id=seg from=45 to=55)
seg (db=Seg db_id=seg from=27 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
AMDSBA3_32_15
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16609..17700
DNA (1092bp) protein (364aa)
idi; isopentenyl-diphosphate delta-isomerase rbh
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Acidilobus saccharovorans 345-15 RepID=D9Q0A0_ACIS3 (db=UNIREF evalue=1.1e-52 bit_score=213.0 identity=35.6 coverage=92.3076923076923)
seg (db=Seg db_id=seg from=250 to=262)
seg (db=Seg db_id=seg from=206 to=217)
AMDSBA3_32_16
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17809..18819
DNA (1011bp) protein (337aa)
hopanoid biosynthesis associated radical SAM protein HpnH rbh
hopanoid biosynthesis associated radical SAM protein HpnH rbh
Putative radical SAM domain-containing protein, 3' end n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHN6_9BACT (db=UNIREF evalue=2.3e-25 bit_score=122.1 identity=39.6 coverage=45.40059347181009)
HpnH: hopanoid biosynthesis associated radic (db=HMMTigr db_id=TIGR03470 from=1 to=320 evalue=4.4e-155 interpro_id=IPR017833 interpro_description=Hopanoid biosynthesis associated radical SAM protein HpnH)
AMDSBA3_32_17
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18906..19406
DNA (501bp) protein (167aa)
Purine and uridine phosphorylases (db=superfamily db_id=SSF53167 from=1 to=127 evalue=1.8e-15)
no description (db=Gene3D db_id=G3DSA:3.40.50.1580 from=1 to=151 evalue=1.5e-11)
(db=HMMPfam db_id=PF01048 from=70 to=125 evalue=3.2e-07 interpro_id=IPR000845 interpro_description=Nucleoside phosphorylase domain GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: nucleoside metabolic process (GO:0009116))
(db=HMMPfam db_id=PF01048 from=2 to=51 evalue=2.2e-05 interpro_id=IPR000845 interpro_description=Nucleoside phosphorylase domain GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: nucleoside metabolic process (GO:0009116))
AMDSBA3_32_18
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19394..20416
DNA (1023bp) protein (341aa)
dihydroflavonol 4-reductase (EC:1.1.1.219)
Putative dihydroflavonol 4-reductase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y729_COPPD (db=UNIREF evalue=4.3e-32 bit_score=144.4 identity=27.8 coverage=96.48093841642229)
HpnA: hopanoid-associated sugar epimerase (db=HMMTigr db_id=TIGR03466 from=1 to=329 evalue=2.4e-131 interpro_id=IPR017829 interpro_description=Hopanoid-associated sugar epimerase)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=5 to=325 evalue=5.9e-84)
AMDSBA3_32_19
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20460..22358
DNA (1899bp) protein (633aa)
shc; squalene-hopene cyclase
shc; squalene-hopene cyclase
Squalene-hopene cyclase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BPY1_TERTT (db=UNIREF evalue=9.1e-153 bit_score=546.2 identity=45.0 coverage=94.3127962085308)
AMDSBA3_32_20
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22355..23215
DNA (861bp) protein (287aa)
squalene synthase (EC:2.5.1.32)
Putative squalene/phytoene synthase n=1 Tax=Streptomyces hygroscopicus subsp. jinggangensis 5008 RepID=H2JTK0_STRHJ (db=UNIREF evalue=1.3e-21 bit_score=109.4 identity=34.3 coverage=80.13937282229965)
HpnC: squalene synthase HpnC (db=HMMTigr db_id=TIGR03464 from=21 to=285 evalue=3.1e-90 interpro_id=IPR017827 interpro_description=Squalene synthase HpnC)
Terpenoid synthases (db=superfamily db_id=SSF48576 from=13 to=286 evalue=2.5e-72 interpro_id=IPR008949 interpro_description=Terpenoid synthase)
AMDSBA3_32_21
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23301..24158
DNA (858bp) protein (286aa)
crtB; phytoene synthase
Phytoene synthase n=1 Tax=Sphingomonas elodea ATCC 31461 RepID=G5CN59_SPHEL (db=UNIREF evalue=7.8e-19 bit_score=100.1 identity=31.7 coverage=95.45454545454545)
seg (db=Seg db_id=seg from=239 to=250)
SQUALEN_PHYTOEN_SYN_2 (db=PatternScan db_id=PS01045 from=158 to=183 evalue=0.0 interpro_id=IPR019845 interpro_description=Squalene/phytoene synthase, conserved site GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
AMDSBA3_32_22
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24158..25495
DNA (1338bp) protein (446aa)
squalene-associated FAD-dependent desaturase
Squalene-associated FAD-dependent desaturase n=2 Tax=Methylobacterium extorquens group RepID=B7L302_METC4 (db=UNIREF evalue=1.1e-08 bit_score=67.0 identity=37.0 coverage=22.421524663677133)
seg (db=Seg db_id=seg from=194 to=210)
seg (db=Seg db_id=seg from=354 to=365)
AMDSBA3_32_23
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25528..26628
DNA (1101bp) protein (367aa)
monogalactosyldiacylglycerol synthase (EC:2.4.1.46)
Monogalactosyldiacylglycerol synthase n=2 Tax=Desulfotomaculum RepID=F0DJD4_9FIRM (db=UNIREF evalue=1.3e-37 bit_score=162.9 identity=32.2 coverage=97.27520435967303)
seg (db=Seg db_id=seg from=322 to=332)
GLYCOSYLTRANSFERASE 1 FAMILY (db=HMMPanther db_id=PTHR21015:SF21 from=82 to=328 evalue=1.6e-40)
AMDSBA3_32_24
unknown

Not on your lists

comp(26806..28041)
DNA (1236bp) protein (412aa)
seg (db=Seg db_id=seg from=8 to=27)
AMDSBA3_32_25
Serratia sp. ATCC 39006, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28394..29785
DNA (1392bp) protein (464aa)
permease for cytosine/purines uracil thiamine allantoin
Permease for cytosine/purines uracil thiamine allantoin n=3 Tax=Alicyclobacillus acidocaldarius RepID=F8IKT4_ALIAT (db=UNIREF evalue=7.1e-54 bit_score=217.2 identity=31.4 coverage=79.09482758620689)
seg (db=Seg db_id=seg from=149 to=166)
transmembrane_regions (db=TMHMM db_id=tmhmm from=423 to=445)
AMDSBA3_32_26
unknown

Not on your lists

comp(29766..30065)
DNA (300bp) protein (100aa)
29766..30065 - ( gc_cont=0.543)
AMDSBA3_32_27
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30401..31783)
DNA (1383bp) protein (461aa)
allantoinase rbh
Allantoinase n=1 Tax=Bacillus clausii KSM-K16 RepID=ALLB_BACSK (db=UNIREF evalue=1.7e-148 bit_score=531.6 identity=57.0 coverage=96.31236442516268)
seg (db=Seg db_id=seg from=247 to=256)
AMDSBA3_32_28
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31890..33302)
DNA (1413bp) protein (471aa)
cytosine/purines uracil thiamine allantoin permease
cytosine/purines uracil thiamine allantoin permease
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RX32_9CLOT (db=UNIREF evalue=1.9e-78 bit_score=298.9 identity=35.3 coverage=93.20594479830149)
seg (db=Seg db_id=seg from=409 to=421)
AMDSBA3_32_29
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33339..34685)
DNA (1347bp) protein (449aa)
pucH; allantoinase (EC:3.5.2.5)
Amidohydrolase n=2 Tax=Mannheimia haemolytica serotype A2 RepID=E2P441_PASHA (db=UNIREF evalue=3.8e-68 bit_score=264.6 identity=33.1 coverage=96.43652561247215)
DIHYDROOROTASE_1 (db=PatternScan db_id=PS00482 from=62 to=70 evalue=0.0 interpro_id=IPR002195 interpro_description=Dihydroorotase, conserved site GO=Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides (GO:0016812))
allantoinase: allantoinase (db=HMMTigr db_id=TIGR03178 from=6 to=445 evalue=4.7e-212 interpro_id=IPR017593 interpro_description=Allantoinase GO=Biological Process: allantoin catabolic process (GO:0000256), Molecular Function: allantoinase activity (GO:0004038), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: cobalt ion binding (GO:0050897))
AMDSBA3_32_30
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35012..36646)
DNA (1635bp) protein (545aa)
ggt2; gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase (Probable) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RR81_9PROT (db=UNIREF evalue=3.3e-42 bit_score=178.7 identity=29.3 coverage=96.5137614678899)
N-terminal nucleophile aminohydrolases (Ntn hydrolases) (db=superfamily db_id=SSF56235 from=4 to=537 evalue=1.7e-147)
seg (db=Seg db_id=seg from=332 to=344)
Displaying items 1-30 of 44 in total

View Taxonomy