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AMDSBA3_38

Alias: AMDSBA3_C37

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Displaying items 31-50 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_38_31
Pontibacillus chungwhensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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32077..32502
DNA (426bp) protein (142aa)
ComE operon protein 2
Competence protein ComEB n=7 Tax=Lactobacillus salivarius RepID=C2EF21_9LACO (db=UNIREF evalue=7.8e-36 bit_score=155.6 identity=50.4 coverage=96.47887323943662)
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=69 to=104 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
dCMP deaminase (db=HMMPIR db_id=PIRSF006019 from=1 to=141 evalue=8.1e-51 interpro_id=IPR016473 interpro_description=dCMP deaminase GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
AMDSBA3_38_32
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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32581..32886
DNA (306bp) protein (102aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase, C subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3F0E4_CONWI (db=UNIREF evalue=4.3e-12 bit_score=76.3 identity=46.1 coverage=86.27450980392157)
Glu-tRNAGln amidotransferase C subunit (db=superfamily db_id=SSF141000 from=2 to=93 evalue=1.1e-27)
gatC: glutamyl-tRNA(Gln) and/or aspartyl-tRN (db=HMMTigr db_id=TIGR00135 from=3 to=95 evalue=2.4e-24 interpro_id=IPR003837 interpro_description=Glu-tRNAGln amidotransferase, C subunit GO=Biological Process: regulation of translational fidelity (GO:0006450))
AMDSBA3_38_33
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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32879..33583
DNA (705bp) protein (235aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Aspartyl/glutamyl-tRNA amidotransferase subunit A n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W948_9ACTO (db=UNIREF evalue=5.2e-37 bit_score=160.2 identity=55.1 coverage=65.1063829787234)
seg (db=Seg db_id=seg from=184 to=191)
seg (db=Seg db_id=seg from=57 to=70)
AMDSBA3_38_34
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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33558..34334
DNA (777bp) protein (259aa)
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=GATA_ACIC5 (db=UNIREF evalue=3.5e-66 bit_score=257.3 identity=54.0 coverage=93.43629343629344)
Amidase signature (AS) enzymes (db=superfamily db_id=SSF75304 from=1 to=253 evalue=3.3e-59 interpro_id=IPR023631 interpro_description=Amidase signature domain)
GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A (db=HMMPanther db_id=PTHR11895:SF7 from=1 to=248 evalue=2.8e-86)
AMDSBA3_38_35
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34331..35806
DNA (1476bp) protein (492aa)
aspartyl/glutamyl-tRNA amidotransferase subunit B
aspartyl/glutamyl-tRNA amidotransferase subunit B
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 2 n=3 Tax=Clostridium acetobutylicum RepID=GATB2_CLOAB (db=UNIREF evalue=3.8e-122 bit_score=444.1 identity=48.1 coverage=95.52845528455285)
AMDSBA3_38_36
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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35784..36701
DNA (918bp) protein (306aa)
peptidase U61 LD-carboxypeptidase A
Putative LD-carboxypeptidase n=1 Tax=Kitasatospora setae KM-6054 RepID=E4NBA4_KITSK (db=UNIREF evalue=9.8e-36 bit_score=156.4 identity=35.9 coverage=94.44444444444444)
(db=HMMPfam db_id=PF02016 from=15 to=289 evalue=8.8e-66 interpro_id=IPR003507 interpro_description=Peptidase S66, LD-carboxypeptidase A)
Class I glutamine amidotransferase-like (db=superfamily db_id=SSF52317 from=1 to=174 evalue=2.9e-38)
AMDSBA3_38_37
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36702..38054
DNA (1353bp) protein (451aa)
RNA methyltransferase
tRNA (uracil(54)-C(5))-methyltransferase n=1 Tax=Pyrococcus abyssi GE5 RepID=ATRMA_PYRAB (db=UNIREF evalue=1.6e-10 bit_score=73.2 identity=25.1 coverage=41.68514412416852)
seg (db=Seg db_id=seg from=314 to=325)
coiled-coil (db=Coil db_id=coil from=348 to=369 evalue=NA)
AMDSBA3_38_38
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(38051..39532)
DNA (1482bp) protein (494aa)
amino acid permease
Gamma-aminobutyrate permease-like transporter n=8 Tax=Burkholderia RepID=I2IGT0_9BURK (db=UNIREF evalue=2.3e-58 bit_score=232.3 identity=30.5 coverage=89.87854251012146)
transmembrane_regions (db=TMHMM db_id=tmhmm from=372 to=391)
transmembrane_regions (db=TMHMM db_id=tmhmm from=395 to=417)
AMDSBA3_38_39
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39572..40054
DNA (483bp) protein (161aa)
yciA; thioesterase superfamily protein
Thioesterase superfamily protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKY4_9SPHI (db=UNIREF evalue=4.8e-26 bit_score=123.2 identity=45.3 coverage=91.30434782608695)
CYTOSOLIC ACYL COENZYME A THIOESTER HYDROLASE (db=HMMPanther db_id=PTHR11049 from=1 to=156 evalue=3.8e-57)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=4 to=158 evalue=8.6e-45)
AMDSBA3_38_40
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40270..40503
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IB79_SULAT (db=UNIREF evalue=2.9e-24 bit_score=116.3 identity=72.7 coverage=97.43589743589743)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
AMDSBA3_38_41
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40500..41285
DNA (786bp) protein (262aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXB2_9FIRM (db=UNIREF evalue=2.9e-52 bit_score=211.1 identity=41.8 coverage=96.18320610687023)
seg (db=Seg db_id=seg from=147 to=164)
transmembrane_regions (db=TMHMM db_id=tmhmm from=216 to=238)
AMDSBA3_38_42
unknown

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41276..41557
DNA (282bp) protein (94aa)
41276..41557 + ( gc_cont=0.585)
AMDSBA3_38_43
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41503..42285
DNA (783bp) protein (261aa)
hypothetical protein
Type IV secretory pathway VirB4 protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IB82_SULAT (db=UNIREF evalue=5.2e-78 bit_score=296.6 identity=70.9 coverage=74.71264367816092)
seg (db=Seg db_id=seg from=201 to=212)
Type IV secretory pathway VirB4 protein {ECO:0000313|EMBL:AEJ39186.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.
AMDSBA3_38_44
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42276..43970
DNA (1695bp) protein (565aa)
type IV secretory pathway VirB4 protein-like protein rbh
type IV secretory pathway VirB4 protein-like protein rbh
Type IV secretory pathway VirB4 protein-like protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXA9_9FIRM (db=UNIREF evalue=1.0e-163 bit_score=582.4 identity=50.4 coverage=97.69911504424779)
seg (db=Seg db_id=seg from=533 to=542)
AMDSBA3_38_45
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43967..44524
DNA (558bp) protein (186aa)
SAF domain-containing protein
SAF domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXA8_9FIRM (db=UNIREF evalue=4.9e-22 bit_score=110.2 identity=37.3 coverage=93.54838709677419)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
Uncharacterized protein {ECO:0000313|EMBL:AEW06110.1}; Flags: Precursor;; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillu
AMDSBA3_38_46
unknown

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44521..45498
DNA (978bp) protein (326aa)
44521..45498 + ( gc_cont=0.536)
AMDSBA3_38_47
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45501..46685
DNA (1185bp) protein (395aa)
virB11; type IV secretion NTPase
Type IV secretion system protein B11, putative n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PEQ9_9SPHN (db=UNIREF evalue=5.3e-34 bit_score=151.0 identity=42.2 coverage=54.43037974683544)
seg (db=Seg db_id=seg from=86 to=100)
(db=HMMPfam db_id=PF00437 from=80 to=359 evalue=1.5e-69 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
AMDSBA3_38_48
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46682..47386
DNA (705bp) protein (235aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXA4_9FIRM (db=UNIREF evalue=4.3e-31 bit_score=140.6 identity=35.1 coverage=94.8936170212766)
seg (db=Seg db_id=seg from=74 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=203 to=225)
AMDSBA3_38_49
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47383..48012
DNA (630bp) protein (210aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXA5_9FIRM (db=UNIREF evalue=1.0e-23 bit_score=115.9 identity=38.9 coverage=78.0952380952381)
seg (db=Seg db_id=seg from=176 to=193)
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=199)
AMDSBA3_38_50
RHI_TM6_38_8, TM6, Bacteria

Not on your lists

comp(48255..48833)
DNA (579bp) protein (193aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=4 Tax=Bordetella RepID=KGUA_BORBR (db=UNIREF evalue=4.8e-20 bit_score=103.6 identity=32.4 coverage=91.19170984455958)
GUANYLATE_KINASE_1 (db=PatternScan db_id=PS00856 from=36 to=53 evalue=0.0 interpro_id=IPR020590 interpro_description=Guanylate kinase, conserved site)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=2 to=182 evalue=1.7e-42)
Displaying items 31-50 of 50 in total

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