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AMDSBA3_38

Alias: AMDSBA3_C37

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Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_38_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(262..1032)
DNA (771bp) protein (257aa)
polysaccharide deacetylase
Peptidoglycan N-acetylglucosamine deacetylase A n=1 Tax=Brevibacterium mcbrellneri ATCC 49030 RepID=D4YJZ5_9MICO (db=UNIREF evalue=2.7e-26 bit_score=124.8 identity=35.3 coverage=71.20622568093385)
seg (db=Seg db_id=seg from=233 to=250)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
AMDSBA3_38_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1576..2040
DNA (465bp) protein (155aa)
GTP cyclohydrolase subunit MoaC
Molybdenum cofactor biosynthesis protein C n=1 Tax=Deinococcus proteolyticus MRP RepID=F0RIW2_DEIPM (db=UNIREF evalue=8.8e-33 bit_score=145.6 identity=52.5 coverage=89.03225806451613)
seg (db=Seg db_id=seg from=40 to=52)
seg (db=Seg db_id=seg from=99 to=110)
AMDSBA3_38_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2015..2515
DNA (501bp) protein (167aa)
molybdopterin adenylyltransferase
Molybdopterin adenylyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TXT9_9FIRM (db=UNIREF evalue=3.7e-45 bit_score=186.8 identity=59.1 coverage=94.01197604790418)
seg (db=Seg db_id=seg from=36 to=56)
MOLYBDOPTERIN BIOSYNTHESIS PROTEIN (db=HMMPanther db_id=PTHR10192 from=1 to=152 evalue=4.5e-52)
AMDSBA3_38_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3091..3393
DNA (303bp) protein (101aa)
10 kDa chaperonin 1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TXT8_9FIRM (db=UNIREF evalue=3.7e-32 bit_score=142.9 identity=71.0 coverage=98.01980198019803)
10 kDa chaperonin
no description (db=HMMSmart db_id=SM00883 from=2 to=93 evalue=2.1e-40 interpro_id=IPR020818 interpro_description=Chaperonin Cpn10 GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GROES CHAPERONIN (db=HMMPanther db_id=PTHR10772 from=1 to=95 evalue=7.1e-32 interpro_id=IPR020818 interpro_description=Chaperonin Cpn10 GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
AMDSBA3_38_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3425..5065
DNA (1641bp) protein (547aa)
groEL; chaperonin GroEL rbh
groEL; chaperonin GroEL rbh
60 kDa chaperonin n=4 Tax=Planococcaceae RepID=E7RFG2_9BACL (db=UNIREF evalue=6.3e-203 bit_score=712.6 identity=68.7 coverage=99.08592321755027)
AMDSBA3_38_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5198..5683
DNA (486bp) protein (162aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXE0_9FIRM (db=UNIREF evalue=3.6e-45 bit_score=186.8 identity=60.7 coverage=98.14814814814815)
seg (db=Seg db_id=seg from=71 to=88)
Uncharacterized protein {ECO:0000313|EMBL:AEJ39156.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA3_38_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5819..6199
DNA (381bp) protein (127aa)
MerR family transcriptional regulator
Transcriptional regulator, MerR family n=2 Tax=Sulfobacillus acidophilus RepID=G8TXD9_9FIRM (db=UNIREF evalue=2.2e-42 bit_score=177.2 identity=71.1 coverage=98.4251968503937)
no description (db=HMMSmart db_id=SM00422 from=9 to=77 evalue=4.5e-19 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=8 to=74 evalue=9.5e-19 interpro_id=IPR009061 interpro_description=DNA binding domain, putative GO=Molecular Function: nucleotide binding (GO:0000166))
AMDSBA3_38_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6200..6736
DNA (537bp) protein (179aa)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TXD8_9FIRM (db=UNIREF evalue=8.8e-77 bit_score=292.0 identity=79.8 coverage=98.88268156424581)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
HGPRTase: hypoxanthine phosphoribosyltransfe (db=HMMTigr db_id=TIGR01203 from=11 to=176 evalue=1.0e-88 interpro_id=IPR005904 interpro_description=Hypoxanthine phosphoribosyl transferase GO=Molecular Function: hypoxanthine phosphoribosyltransferase activity (GO:0004422), Cellular Component: cytoplasm (GO:0005737), Biological Process: purine ribonucleoside salvage (GO:0006166))
PHOSPHOHEXOMUTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR22573 from=10 to=175 evalue=1.8e-72)
AMDSBA3_38_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6736..8256
DNA (1521bp) protein (507aa)
GMP synthase (EC:6.3.5.2)
GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] subunit A n=3 Tax=Methanobrevibacter smithii RepID=GUAAA_METS3 (db=UNIREF evalue=6.0e-22 bit_score=111.3 identity=29.7 coverage=35.50295857988166)
seg (db=Seg db_id=seg from=219 to=241)
AMDSBA3_38_10
unknown

Not on your lists

8477..8584
DNA (108bp) protein (36aa)
8477..8584 + ( gc_cont=0.491)
AMDSBA3_38_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8623..9957
DNA (1335bp) protein (445aa)
purB; adenylosuccinate lyase rbh
Adenylosuccinate lyase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLT6_THELI (db=UNIREF evalue=2.7e-82 bit_score=311.6 identity=39.1 coverage=98.20224719101124)
seg (db=Seg db_id=seg from=160 to=173)
AMDSBA3_38_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9941..10639
DNA (699bp) protein (233aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=PUR7_CHLPB (db=UNIREF evalue=1.7e-64 bit_score=251.5 identity=54.8 coverage=97.85407725321889)
SAICAR_SYNTHETASE_1 (db=PatternScan db_id=PS01057 from=83 to=97 evalue=0.0 interpro_id=IPR018236 interpro_description=SAICAR synthetase, conserved site GO=Molecular Function: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (GO:0004639), Biological Process: purine nucleotide biosynthetic process (GO:0006164))
SAICAR_SYNTHETASE_2 (db=PatternScan db_id=PS01058 from=170 to=178 evalue=0.0 interpro_id=IPR018236 interpro_description=SAICAR synthetase, conserved site GO=Molecular Function: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (GO:0004639), Biological Process: purine nucleotide biosynthetic process (GO:0006164))
AMDSBA3_38_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10639..10890
DNA (252bp) protein (84aa)
(db=HMMPfam db_id=PF02700 from=4 to=81 evalue=1.8e-24 interpro_id=IPR003850 interpro_description=Phosphoribosylformylglycinamidine synthetase, PurS subunit GO=Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879))
TIGR00302: phosphoribosylformylglycinamidin (db=HMMTigr db_id=TIGR00302 from=4 to=82 evalue=1.5e-23 interpro_id=IPR003850 interpro_description=Phosphoribosylformylglycinamidine synthetase, PurS subunit GO=Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879))
PurS-like (db=superfamily db_id=SSF82697 from=3 to=82 evalue=9.8e-20)
no description (db=Gene3D db_id=G3DSA:3.30.1280.10 from=2 to=81 evalue=2.1e-19 interpro_id=IPR003850 interpro_description=Phosphoribosylformylglycinamidine synthetase, PurS subunit GO=Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879))
AMDSBA3_38_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10887..11588
DNA (702bp) protein (234aa)
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=2 Tax=Candidatus Pelagibacter ubique RepID=PURQ_PELUB (db=UNIREF evalue=1.8e-37 bit_score=161.8 identity=38.6 coverage=96.15384615384616)
Phosphoribosylformylglycinamidine synthase I (db=HMMPIR db_id=PIRSF001586 from=1 to=228 evalue=1.2e-87 interpro_id=IPR010075 interpro_description=Phosphoribosylformylglycinamidine synthase I GO=Molecular Function: phosphoribosylformylglycinamidine synthase activity (GO:0004642), Cellular Component: cytoplasm (GO:0005737), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
FGAM_synth_I: phosphoribosylformylglycin (db=HMMTigr db_id=TIGR01737 from=1 to=225 evalue=3.6e-85 interpro_id=IPR010075 interpro_description=Phosphoribosylformylglycinamidine synthase I GO=Molecular Function: phosphoribosylformylglycinamidine synthase activity (GO:0004642), Cellular Component: cytoplasm (GO:0005737), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
AMDSBA3_38_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11578..13734
DNA (2157bp) protein (719aa)
purL; phosphoribosylformylglycinamidine synthase II rbh
purL; phosphoribosylformylglycinamidine synthase II rbh
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=PURL_METTH (db=UNIREF evalue=3.2e-109 bit_score=401.7 identity=39.2 coverage=80.25034770514604)
AMDSBA3_38_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13748..15148
DNA (1401bp) protein (467aa)
purF; phosphoribosylpyrophosphate amidotransferase rbh
purF; phosphoribosylpyrophosphate amidotransferase rbh
Amidophosphoribosyltransferase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCB3_9FIRM (db=UNIREF evalue=1.0e-113 bit_score=416.0 identity=44.1 coverage=95.93147751605996)
AMDSBA3_38_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15138..16151
DNA (1014bp) protein (338aa)
purM; phosphoribosylamine--glycine ligase rbh
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Nitrosomonas eutropha C91 RepID=PUR5_NITEC (db=UNIREF evalue=1.1e-67 bit_score=262.7 identity=43.4 coverage=96.44970414201184)
PHOSPHORIBOSYLAMINE-GLYCINE LIGASE-RELATED (db=HMMPanther db_id=PTHR10520 from=8 to=337 evalue=3.7e-131)
purM: phosphoribosylformylglycinamidine cycl (db=HMMTigr db_id=TIGR00878 from=8 to=331 evalue=5.6e-131 interpro_id=IPR004733 interpro_description=Phosphoribosylformylglycinamidine cyclo-ligase GO=Molecular Function: phosphoribosylformylglycinamidine cyclo-ligase activity (GO:0004641), Cellular Component: cytoplasm (GO:0005737), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
AMDSBA3_38_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16148..16762
DNA (615bp) protein (205aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYS1_LYNSP (db=UNIREF evalue=6.8e-25 bit_score=119.8 identity=37.2 coverage=87.3170731707317)
PurN: phosphoribosylglycinamide formyltransf (db=HMMTigr db_id=TIGR00639 from=1 to=186 evalue=2.4e-65 interpro_id=IPR004607 interpro_description=Phosphoribosylglycinamide formyltransferase GO=Molecular Function: phosphoribosylglycinamide formyltransferase activity (GO:0004644), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
Formyltransferase (db=superfamily db_id=SSF53328 from=1 to=189 evalue=6.1e-55 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
AMDSBA3_38_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16741..18249
DNA (1509bp) protein (503aa)
IMP cyclohydrolase, phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:3.5.4.10 2.1.2.3) rbh
IMP cyclohydrolase, phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:3.5.4.10 2.1.2.3) rbh
Bifunctional purine biosynthesis protein PurH n=3 Tax=Clostridium acetobutylicum RepID=PUR9_CLOAB (db=UNIREF evalue=1.3e-96 bit_score=359.4 identity=41.9 coverage=98.2107355864811)
AMDSBA3_38_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18266..19492
DNA (1227bp) protein (409aa)
purD; phosphoribosylamine--glycine ligase rbh
purD; phosphoribosylamine--glycine ligase rbh
Phosphoribosylamine--glycine ligase n=1 Tax=Marinithermus hydrothermalis DSM 14884 RepID=F2NQT6_MARHT (db=UNIREF evalue=3.0e-80 bit_score=304.7 identity=44.4 coverage=98.53300733496333)
AMDSBA3_38_21
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19506..21377)
DNA (1872bp) protein (624aa)
ABC-type multidrug transport system, ATPase and permease component
Aliphatic sulfonate ABC transporter ATP-binding protein n=2 Tax=Bacillus atrophaeus RepID=I4XE45_BACAT (db=UNIREF evalue=1.5e-14 bit_score=87.0 identity=28.6 coverage=30.448717948717945)
seg (db=Seg db_id=seg from=46 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
AMDSBA3_38_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21671..22279
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXC6_9FIRM (db=UNIREF evalue=5.3e-46 bit_score=189.9 identity=49.3 coverage=96.55172413793103)
hypothetical protein
seg (db=Seg db_id=seg from=37 to=66)
seg (db=Seg db_id=seg from=126 to=141)
AMDSBA3_38_23
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22615..24009
DNA (1395bp) protein (465aa)
glutamate decarboxylase
glutamate decarboxylase
Glutamate decarboxylase alpha n=11 Tax=Listeria monocytogenes RepID=DCEA_LISMO (db=UNIREF evalue=3.5e-109 bit_score=401.0 identity=41.8 coverage=93.76344086021506)
AMDSBA3_38_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24096..24383
DNA (288bp) protein (96aa)
TrpR-like protein YerC/YecD
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EJ60_9CLOT (db=UNIREF evalue=3.1e-20 bit_score=103.2 identity=50.0 coverage=96.875)
yecD_yerC: TrpR homolog YerC/YecD (db=HMMTigr db_id=TIGR02531 from=6 to=93 evalue=9.4e-45 interpro_id=IPR013368 interpro_description=TrpR homologue YerC/YecD)
(db=HMMPfam db_id=PF01371 from=9 to=93 evalue=1.6e-28 interpro_id=IPR000831 interpro_description=Trp repressor GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA3_38_25
unknown

Not on your lists

comp(24330..24677)
DNA (348bp) protein (116aa)
seg (db=Seg db_id=seg from=48 to=60)
AMDSBA3_38_26
unknown

Not on your lists

24979..25449
DNA (471bp) protein (157aa)
24979..25449 + ( gc_cont=0.573)
AMDSBA3_38_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25664..27808
DNA (2145bp) protein (715aa)
UvrD/REP helicase rbh
UvrD/REP helicase rbh
UvrD/REP helicase n=2 Tax=Sulfobacillus acidophilus RepID=G8TXC4_9FIRM (db=UNIREF evalue=0.0 bit_score=1057.7 identity=73.0 coverage=98.6013986013986)
seg (db=Seg db_id=seg from=452 to=465)
AMDSBA3_38_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27798..29825
DNA (2028bp) protein (676aa)
ligA; NAD-dependent DNA ligase rbh
ligA; NAD-dependent DNA ligase rbh
DNA ligase n=2 Tax=Candidatus Pelagibacter ubique RepID=DNLJ_PELUB (db=UNIREF evalue=2.3e-101 bit_score=375.6 identity=33.9 coverage=95.41420118343196)
coiled-coil (db=Coil db_id=coil from=37 to=58 evalue=NA)
AMDSBA3_38_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29982..30974
DNA (993bp) protein (331aa)
oligopeptide ABC transporter ATP-binding protein rbh
ABC-type dipeptide/oligopeptide/nickel transport systems, ATP-binding protein I & II n=1 Tax=Haloferax mediterranei ATCC 33500 RepID=I3R5P3_HALME (db=UNIREF evalue=1.0e-54 bit_score=219.5 identity=38.5 coverage=95.46827794561933)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=6 to=326 evalue=4.4e-168)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=157 to=171 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
AMDSBA3_38_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30971..31975
DNA (1005bp) protein (335aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24) rbh
Nickel ABC transporter, ATP-binding protein n=2 Tax=Methanosarcina RepID=Q46F88_METBF (db=UNIREF evalue=1.2e-63 bit_score=249.2 identity=42.4 coverage=94.32835820895522)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=19 to=333 evalue=8.3e-171)
seg (db=Seg db_id=seg from=127 to=138)
Displaying items 1-30 of 50 in total

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