ggKbase home page

AMDSBA3_38_24

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 24096..24383

Top 3 Functional Annotations

Value Algorithm Source
TrpR-like protein YerC/YecD similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 95.0
  • Bit_score: 160
  • Evalue 2.00e-37
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EJ60_9CLOT (db=UNIREF evalue=3.1e-20 bit_score=103.2 identity=50.0 coverage=96.875) similarity UNIREF
DB: UNIREF
  • Identity: 50.0
  • Coverage: 96.88
  • Bit_score: 103
  • Evalue 3.10e-20
yecD_yerC: TrpR homolog YerC/YecD (db=HMMTigr db_id=TIGR02531 from=6 to=93 evalue=9.4e-45 interpro_id=IPR013368 interpro_description=TrpR homologue YerC/YecD) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.81e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 288
ATGAATCCAAAGTTAAAGACGCAAGAGACCGACCGATTGTGTCAGGCATTGCTAACCTTGAAGACAACAGACGAGTGTTATGCATTTTTAGAGGATATTTTGACCATCAGCGAGATCCAGTCCATCGCCCAGCGGCTGGCTGTTGCCCGCATGCTGGACGAGGGTCAGACGTACGATGATATTGAAAAGCTTACCGGCGCGTCGTCGGCGACCATATCGCGGGTGAAGCGTTGCCTAACCTTTGGCGCAGACGGCTATCGCCTGGTTTTGGACCGCTTGAATGCGTGA
PROTEIN sequence
Length: 96
MNPKLKTQETDRLCQALLTLKTTDECYAFLEDILTISEIQSIAQRLAVARMLDEGQTYDDIEKLTGASSATISRVKRCLTFGADGYRLVLDRLNA*