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AMDSBA3_46

Alias: AMDSBA3_C45

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_46_1
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..743)
DNA (741bp) protein (247aa)
IS605 OrfB family transposase
Transposase, IS605 OrfB family n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z397_9EURY (db=UNIREF evalue=5.1e-59 bit_score=233.4 identity=44.0 coverage=99.59514170040485)
(db=HMMPfam db_id=PF01385 from=65 to=247 evalue=1.1e-33 interpro_id=IPR001959 interpro_description=Transposase, probable, IS891/IS1136/IS1341)
(db=HMMPfam db_id=PF12323 from=1 to=45 evalue=2.1e-17 interpro_id=IPR021027 interpro_description=Transposase, putative, helix-turn-helix domain)
AMDSBA3_46_2
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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comp(923..1684)
DNA (762bp) protein (254aa)
ribulose-5-phosphate 4-epimerase-like epimerase or aldolase
Putative uncharacterized protein n=1 Tax=Meyerozyma guilliermondii ATCC 6260 RepID=A5DKW6_PICGU (db=UNIREF evalue=8.4e-57 bit_score=226.1 identity=48.5 coverage=92.91338582677166)
seg (db=Seg db_id=seg from=199 to=209)
ADDUCIN (db=HMMPanther db_id=PTHR10672 from=11 to=248 evalue=7.9e-120)
AMDSBA3_46_3
unknown

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comp(1813..1947)
DNA (135bp) protein (45aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
AMDSBA3_46_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2033..2524)
DNA (492bp) protein (164aa)
hypothetical protein
GAF domain protein (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7A2_9BACT (db=UNIREF evalue=1.6e-08 bit_score=65.1 identity=47.1 coverage=40.853658536585364)
seg (db=Seg db_id=seg from=108 to=126)
seg (db=Seg db_id=seg from=27 to=40)
AMDSBA3_46_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3126..3368)
DNA (243bp) protein (81aa)
4Fe-4S ferredoxin
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=42 to=53 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
no description (db=Gene3D db_id=G3DSA:3.30.70.20 from=2 to=79 evalue=1.9e-22)
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=1 to=75 evalue=4.1e-19)
AMDSBA3_46_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3471..5801)
DNA (2331bp) protein (777aa)
CoA-binding domain-containing protein rbh
CoA-binding domain-containing protein rbh
CoA-binding domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVM8_9FIRM (db=UNIREF evalue=2.4e-256 bit_score=890.6 identity=60.4 coverage=99.22779922779922)
seg (db=Seg db_id=seg from=728 to=745)
AMDSBA3_46_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5885..7069
DNA (1185bp) protein (395aa)
histone deacetylase rbh
Acetoin utilization protein AcuC n=1 Tax=Brevibacterium mcbrellneri ATCC 49030 RepID=D4YMU0_9MICO (db=UNIREF evalue=1.5e-68 bit_score=265.8 identity=37.5 coverage=95.69620253164557)
seg (db=Seg db_id=seg from=128 to=141)
HISTONE DEACETYLASE (db=HMMPanther db_id=PTHR10625 from=36 to=360 evalue=4.3e-111 interpro_id=IPR000286 interpro_description=Histone deacetylase superfamily)
AMDSBA3_46_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7112..8812
DNA (1701bp) protein (567aa)
type III restriction protein res subunit
type III restriction protein res subunit
Type III restriction protein res subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TSF3_9FIRM (db=UNIREF evalue=8.8e-232 bit_score=808.5 identity=71.2 coverage=98.94179894179894)
AMDSBA3_46_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8809..10581
DNA (1773bp) protein (591aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSF4_9FIRM (db=UNIREF evalue=1.3e-89 bit_score=336.3 identity=34.3 coverage=98.30795262267344)
AMDSBA3_46_10
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10609..12654
DNA (2046bp) protein (682aa)
protease (EC:3.4.21.83)
protease (EC:3.4.21.83)
Oligopeptidase B (Fragment) n=1 Tax=Edwardsiella tarda ATCC 23685 RepID=D4F5A9_EDWTA (db=UNIREF evalue=6.3e-51 bit_score=208.0 identity=31.7 coverage=60.55718475073314)
OLIGOPEPTIDASE B (LYSYL AND ARGININYL OLIGOPEPTIDASE) (db=HMMPanther db_id=PTHR11757:SF3 from=1 to=681 evalue=1.6e-188)
AMDSBA3_46_11
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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12674..16171
DNA (3498bp) protein (1166aa)
family 2 glycoside hydrolase
Beta-glucuronidase n=2 Tax=Pseudovibrio RepID=B6R9K7_9RHOB (db=UNIREF evalue=4.7e-22 bit_score=112.8 identity=25.4 coverage=32.76157804459691)
seg (db=Seg db_id=seg from=237 to=251)
seg (db=Seg db_id=seg from=975 to=986)
AMDSBA3_46_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16173..16898)
DNA (726bp) protein (242aa)
diguanylate phosphodiesterase
Uncharacterized protein n=2 Tax=Vibrio tubiashii RepID=I1DCQ5_9VIBR (db=UNIREF evalue=6.8e-08 bit_score=63.5 identity=27.2 coverage=78.099173553719)
EAL domain-like (db=superfamily db_id=SSF141868 from=9 to=241 evalue=6.8e-47 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
(db=HMMPfam db_id=PF00563 from=12 to=240 evalue=7.4e-45 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
AMDSBA3_46_13
unknown

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comp(16895..17035)
DNA (141bp) protein (47aa)
16895..17035 - ( gc_cont=0.596)
AMDSBA3_46_14
Geobacillus sp. WCH70, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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17127..17495
DNA (369bp) protein (123aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS24319.1}; TaxID=471223 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain WCH70).;"
Uncharacterized protein n=3 Tax=Geobacillus RepID=C5DAK5_GEOSW
AMDSBA3_46_15
unknown

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17492..17641
DNA (150bp) protein (50aa)
17492..17641 + ( gc_cont=0.533)
AMDSBA3_46_16
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17727..18776)
DNA (1050bp) protein (350aa)
(db=HMMPfam db_id=PF02810 from=159 to=177 evalue=7.2e-09 interpro_id=IPR004027 interpro_description=SEC-C motif)
Sec-C motif (db=superfamily db_id=SSF103642 from=156 to=177 evalue=2.3e-06)
(db=HMMPfam db_id=PF08897 from=8 to=133 evalue=1.4e-05 interpro_id=IPR014993 interpro_description=Protein of unknown function DUF1841)
SEC-C motif domain protein Tax=CG_Anaero_02
AMDSBA3_46_17
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19070..19558
DNA (489bp) protein (163aa)
flavin reductase domain-containing protein FMN-binding protein
Putative nitrilotriacetate monooxygenase component B (NtaB) n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z1X2_9GAMM (db=UNIREF evalue=8.1e-13 bit_score=79.3 identity=33.3 coverage=92.02453987730061)
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=1 to=156 evalue=1.8e-43 interpro_id=IPR009002 interpro_description=FMN-binding split barrel-related)
no description (db=HMMSmart db_id=SM00903 from=10 to=155 evalue=1.7e-42 interpro_id=IPR002563 interpro_description=Flavin reductase-like, FMN-binding GO=Molecular Function: FMN binding (GO:0010181), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: flavin reductase activity (GO:0042602), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA3_46_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19488..19823)
DNA (336bp) protein (112aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSF8_9FIRM (db=UNIREF evalue=1.3e-30 bit_score=137.9 identity=61.2 coverage=86.60714285714286)
Uncharacterized protein {ECO:0000313|EMBL:AEJ40610.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I211_SULAT
AMDSBA3_46_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19853..20836)
DNA (984bp) protein (328aa)
2-nitropropane dioxygenase (EC:1.13.12.16) rbh
2-nitropropane dioxygenase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5C4_9DELT (db=UNIREF evalue=1.3e-22 bit_score=112.8 identity=28.6 coverage=91.46341463414635)
Inosine monophosphate dehydrogenase (IMPDH) (db=superfamily db_id=SSF51412 from=2 to=306 evalue=1.3e-55)
seg (db=Seg db_id=seg from=21 to=32)
AMDSBA3_46_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20833..21228)
DNA (396bp) protein (132aa)
hit; histidine triad (HIT) protein
Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7TAR3_NEMVE (db=UNIREF evalue=1.9e-20 bit_score=104.4 identity=50.0 coverage=73.48484848484848)
(db=HMMPfam db_id=PF01230 from=10 to=101 evalue=3.1e-19 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
HISTIDINE TRIAD (HIT) PROTEIN (db=HMMPanther db_id=PTHR23089 from=18 to=127 evalue=4.2e-14 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
AMDSBA3_46_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21457..21711
DNA (255bp) protein (85aa)
(db=HMMPfam db_id=PF03698 from=5 to=79 evalue=1.1e-18 interpro_id=IPR005370 interpro_description=Uncharacterised protein family UPF0180)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I232_SULAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW06671.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
AMDSBA3_46_22
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21889..22695
DNA (807bp) protein (269aa)
yitD; (2R)-phospho-3-sulfolactate synthase, ComA
Phosphosulfolactate synthase n=1 Tax=Frankia sp. EuI1c RepID=E3IZM0_FRASU (db=UNIREF evalue=1.6e-53 bit_score=215.3 identity=46.8 coverage=92.56505576208178)
seg (db=Seg db_id=seg from=251 to=267)
(2r)-phospho-3-sulfolactate synthase ComA (db=superfamily db_id=SSF102110 from=3 to=251 evalue=4.1e-76 interpro_id=IPR003830 interpro_description=(2R)-phospho-3-sulpholactate synthase, ComA GO=Biological Process: coenzyme M biosynthetic process (GO:0019295))
AMDSBA3_46_23
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22989..23717
DNA (729bp) protein (243aa)
5'-nucleotidase
Putative 5'-nucleotidase alr3139 n=2 Tax=Nostocaceae RepID=Y3139_NOSS1 (db=UNIREF evalue=4.3e-18 bit_score=97.4 identity=36.1 coverage=66.2551440329218)
SurE-like (db=superfamily db_id=SSF64167 from=1 to=223 evalue=3.4e-55 interpro_id=IPR002828 interpro_description=Survival protein SurE-like phosphatase/nucleotidase GO=Molecular Function: hydrolase activity (GO:0016787))
(db=HMMPfam db_id=PF01975 from=1 to=164 evalue=1.3e-51 interpro_id=IPR002828 interpro_description=Survival protein SurE-like phosphatase/nucleotidase GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA3_46_24
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24968..25597
DNA (630bp) protein (210aa)
resolvase-like protein
ISC1913-like resolvase n=2 Tax=Desulfurococcaceae RepID=I3TFS3_9CREN (db=UNIREF evalue=1.2e-27 bit_score=129.0 identity=34.8 coverage=97.61904761904762)
seg (db=Seg db_id=seg from=97 to=108)
Resolvase-like (db=superfamily db_id=SSF53041 from=61 to=189 evalue=3.3e-18 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
AMDSBA3_46_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25765..26229
DNA (465bp) protein (155aa)
seg (db=Seg db_id=seg from=9 to=22)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=2 to=132 evalue=1.1e-27)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I237_SULAT
hypothetical protein
AMDSBA3_46_26
unknown

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comp(26193..26345)
DNA (153bp) protein (51aa)
seg (db=Seg db_id=seg from=16 to=32)
AMDSBA3_46_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26381..26743)
DNA (363bp) protein (121aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSI4_9FIRM (db=UNIREF evalue=6.8e-49 bit_score=198.7 identity=80.7 coverage=97.52066115702479)
METHYLGLYOXAL_SYNTH (db=PatternScan db_id=PS01335 from=54 to=62 evalue=0.0 interpro_id=IPR018148 interpro_description=Methylglyoxal synthase, active site GO=Molecular Function: methylglyoxal synthase activity (GO:0008929), Biological Process: methylglyoxal biosynthetic process (GO:0019242))
MGSA: methylglyoxal synthase (db=HMMTigr db_id=TIGR00160 from=1 to=120 evalue=2.7e-56 interpro_id=IPR004363 interpro_description=Methylglyoxal synthase GO=Molecular Function: methylglyoxal synthase activity (GO:0008929), Biological Process: methylglyoxal biosynthetic process (GO:0019242))
AMDSBA3_46_28
unknown

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comp(27259..27834)
DNA (576bp) protein (192aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=101)
AMDSBA3_46_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27939..28316
DNA (378bp) protein (126aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8TSJ9_9FIRM (db=UNIREF evalue=7.4e-30 bit_score=135.6 identity=51.2 coverage=95.23809523809523)
Uncharacterized protein {ECO:0000313|EMBL:AEW06691.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TSJ9_SULAD
Displaying 29 items

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