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AMDSBA3_47

Alias: AMDSBA3_C46

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_47_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

557..781
DNA (225bp) protein (75aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ27_9FIRM (db=UNIREF evalue=1.6e-19 bit_score=100.5 identity=64.8 coverage=93.33333333333333)
seg (db=Seg db_id=seg from=17 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
AMDSBA3_47_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

817..1155
DNA (339bp) protein (113aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ26_9FIRM (db=UNIREF evalue=1.1e-35 bit_score=154.8 identity=64.3 coverage=98.23008849557522)
seg (db=Seg db_id=seg from=59 to=68)
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=103)
AMDSBA3_47_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1152..1844
DNA (693bp) protein (231aa)
ATP synthase F0 subcomplex subunit A rbh
ATP synthase F0 subcomplex subunit A rbh
ATP synthase subunit a n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ25_9FIRM (db=UNIREF evalue=9.8e-113 bit_score=411.8 identity=86.1 coverage=99.13419913419914)
seg (db=Seg db_id=seg from=61 to=80)
AMDSBA3_47_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1874..2101
DNA (228bp) protein (76aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=8 to=25)
ATPASE_C (db=PatternScan db_id=PS00605 from=38 to=59 evalue=0.0 interpro_id=IPR020537 interpro_description=ATPase, F0 complex, subunit C, DCCD-binding site)
AMDSBA3_47_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2131..2625
DNA (495bp) protein (165aa)
ATP synthase subunit b 1 n=1 Tax=Rhodospirillum centenum SW PF1_RHOCS">RepID=ATPF1_RHOCS (db=UNIREF evalue=2.1e-08 bit_score=64.7 identity=30.7 coverage=75.75757575757575)
seg (db=Seg db_id=seg from=15 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=30)
coiled-coil (db=Coil db_id=coil from=44 to=101 evalue=NA)
AMDSBA3_47_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2622..3185
DNA (564bp) protein (188aa)
ATP synthase F1 subcomplex subunit delta
ATP synthase F1 subcomplex delta subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ22_9FIRM (db=UNIREF evalue=4.0e-48 bit_score=196.8 identity=52.7 coverage=98.93617021276596)
seg (db=Seg db_id=seg from=160 to=183)
seg (db=Seg db_id=seg from=119 to=132)
AMDSBA3_47_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3175..4683
DNA (1509bp) protein (503aa)
atpA; ATP synthase F1 subunit alpha rbh
atpA; ATP synthase F1 subunit alpha rbh
ATP synthase subunit alpha 1 n=4 Tax=Legionella pneumophila RepID=ATPA1_LEGPA (db=UNIREF evalue=1.4e-108 bit_score=399.1 identity=45.5 coverage=90.25844930417495)
AMDSBA3_47_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4684..5544
DNA (861bp) protein (287aa)
ATP synthase F1 subcomplex subunit gamma
ATP synthase F1 subcomplex subunit gamma
ATP synthase gamma chain n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ20_9FIRM (db=UNIREF evalue=3.1e-116 bit_score=423.7 identity=76.2 coverage=99.30313588850174)
AMDSBA3_47_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5557..6996
DNA (1440bp) protein (480aa)
ATP synthase F1 subcomplex subunit beta
ATP synthase F1 subcomplex subunit beta
ATP synthase subunit beta, chloroplastic n=3 Tax=Streptophyta RepID=ATPB_CHLAT (db=UNIREF evalue=1.1e-179 bit_score=635.2 identity=67.3 coverage=98.125)
seg (db=Seg db_id=seg from=8 to=18)
AMDSBA3_47_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7008..7439
DNA (432bp) protein (144aa)
ATP synthase subunit epsilon
ATP synthase epsilon chain, chloroplastic n=1 Tax=Cyanidioschyzon merolae RepID=ATPE_CYAME (db=UNIREF evalue=3.9e-11 bit_score=73.6 identity=32.8 coverage=83.33333333333334)
seg (db=Seg db_id=seg from=93 to=102)
coiled-coil (db=Coil db_id=coil from=117 to=138 evalue=NA)
AMDSBA3_47_11
unknown

Not on your lists

7487..7885
DNA (399bp) protein (133aa)
7487..7885 + ( gc_cont=0.576)
AMDSBA3_47_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7888..8580
DNA (693bp) protein (231aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ16_9FIRM (db=UNIREF evalue=1.7e-32 bit_score=145.2 identity=33.8 coverage=98.7012987012987)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
YwmB-like (db=superfamily db_id=SSF143842 from=138 to=228 evalue=2.9e-07)
AMDSBA3_47_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8656..9231
DNA (576bp) protein (192aa)
spoIIQ; peptidase M23
M23 peptidase domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WEC7_9CAUL (db=UNIREF evalue=4.1e-16 bit_score=90.5 identity=42.1 coverage=68.22916666666666)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=56 to=187 evalue=2.3e-31 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
AMDSBA3_47_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9249..9590
DNA (342bp) protein (114aa)
sporulation transcriptional regulator SpoIIID
Stage III sporulation protein D n=35 Tax=Bacillus RepID=SP3D_BACSU (db=UNIREF evalue=6.9e-19 bit_score=99.0 identity=56.5 coverage=73.68421052631578)
seg (db=Seg db_id=seg from=4 to=14)
HTH_DEOR_1 (db=PatternScan db_id=PS00894 from=36 to=69 evalue=0.0 interpro_id=IPR018356 interpro_description=Transcription regulator, HTH DeoR-type, conserved site GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA3_47_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10095..11291
DNA (1197bp) protein (399aa)
S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=METK_GRABC (db=UNIREF evalue=5.3e-98 bit_score=363.6 identity=50.6 coverage=94.73684210526315)
AMDSBA3_47_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11346..11792
DNA (447bp) protein (149aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYM1_9FIRM (db=UNIREF evalue=6.9e-27 bit_score=125.9 identity=46.9 coverage=86.57718120805369)
seg (db=Seg db_id=seg from=92 to=114)
seg (db=Seg db_id=seg from=6 to=20)
AMDSBA3_47_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11913..13565
DNA (1653bp) protein (551aa)
diguanylate cyclase
Diguanylate cyclase n=2 Tax=Leptospirillum sp. Group II RepID=A3ERH0_9BACT (db=UNIREF evalue=7.7e-23 bit_score=114.4 identity=35.7 coverage=35.93466424682396)
transmembrane_regions (db=TMHMM db_id=tmhmm from=131 to=153)
transmembrane_regions (db=TMHMM db_id=tmhmm from=102 to=121)
AMDSBA3_47_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13807..15036
DNA (1230bp) protein (410aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=219 to=241)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
transmembrane_regions (db=TMHMM db_id=tmhmm from=89 to=111)
transmembrane_regions (db=TMHMM db_id=tmhmm from=145 to=167)
AMDSBA3_47_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15153..15350
DNA (198bp) protein (66aa)
cspA; cold-shock DNA-binding domain-containing protein
Cold shock-like protein CspLA n=66 Tax=Bacilli RepID=CSPA_LISIN (db=UNIREF evalue=4.0e-19 bit_score=99.0 identity=71.0 coverage=92.42424242424242)
COLD_SHOCK (db=PatternScan db_id=PS00352 from=14 to=32 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site)
COLD SHOCK DOMAIN CONTAINING PROTEINS (db=HMMPanther db_id=PTHR11544 from=1 to=63 evalue=8.9e-36)
AMDSBA3_47_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15484..15990
DNA (507bp) protein (169aa)
30S ribosomal protein S30P
SSU ribosomal protein S30P/sigma 54 modulation protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E8V9_9ACTN (db=UNIREF evalue=5.3e-23 bit_score=113.2 identity=37.1 coverage=92.3076923076923)
coiled-coil (db=Coil db_id=coil from=72 to=93 evalue=NA)
Ribosome binding protein Y (YfiA homologue) (db=superfamily db_id=SSF69754 from=2 to=114 evalue=9.3e-31 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
AMDSBA3_47_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16110..16730
DNA (621bp) protein (207aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYL7_9FIRM (db=UNIREF evalue=2.4e-46 bit_score=191.0 identity=48.1 coverage=98.55072463768117)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I9U7_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ39019.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA3_47_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16964..18316
DNA (1353bp) protein (451aa)
metal dependent phosphohydrolase rbh
metal dependent phosphohydrolase rbh
Putative signal transduction protein n=1 Tax=Methanocella arvoryzae MRE50 RepID=Q0W2L1_UNCMA (db=UNIREF evalue=1.8e-30 bit_score=139.4 identity=35.4 coverage=45.8980044345898)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=193)
AMDSBA3_47_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18443..20887
DNA (2445bp) protein (815aa)
secA; protein translocase subunit secA
secA; protein translocase subunit secA
Protein translocase subunit SecA n=1 Tax=Patulibacter sp. I11 RepID=H0E4J1_9ACTN (db=UNIREF evalue=7.8e-157 bit_score=560.1 identity=53.7 coverage=66.50306748466258)
AMDSBA3_47_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21051..22064
DNA (1014bp) protein (338aa)
peptide chain release factor 2
peptide chain release factor 2
Peptide chain release factor 2 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT09_9FIRM (db=UNIREF evalue=2.6e-106 bit_score=391.0 identity=58.1 coverage=95.56213017751479)
AMDSBA3_47_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22061..22723
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYL3_9FIRM (db=UNIREF evalue=1.0e-50 bit_score=205.7 identity=45.2 coverage=99.09502262443439)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=4 to=18)
AMDSBA3_47_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22733..23578
DNA (846bp) protein (282aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYL2_9FIRM (db=UNIREF evalue=1.7e-122 bit_score=444.5 identity=76.3 coverage=98.22695035460993)
seg (db=Seg db_id=seg from=73 to=85)
AMDSBA3_47_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23580..24803)
DNA (1224bp) protein (408aa)
major facilitator superfamily protein rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U308_9CHLR (db=UNIREF evalue=9.4e-10 bit_score=70.5 identity=24.2 coverage=92.64705882352942)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=99)
AMDSBA3_47_28
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24882..25667)
DNA (786bp) protein (262aa)
hypothetical protein
Beta-lactamase, putative n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W2U5_9CYAN (db=UNIREF evalue=1.1e-22 bit_score=112.8 identity=33.1 coverage=91.98473282442748)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=3 to=258 evalue=2.0e-52 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=14 to=258 evalue=1.8e-08 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
AMDSBA3_47_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25777..26688
DNA (912bp) protein (304aa)
rbsK; ribokinase
Possible ribokinase n=1 Tax=Corynebacterium striatum ATCC 6940 RepID=C2CQM7_CORST (db=UNIREF evalue=4.2e-47 bit_score=194.1 identity=41.8 coverage=95.06578947368422)
seg (db=Seg db_id=seg from=241 to=262)
D_ribokin_bact: ribokinase (db=HMMTigr db_id=TIGR02152 from=3 to=299 evalue=1.6e-110 interpro_id=IPR011877 interpro_description=Ribokinase, bacterial GO=Molecular Function: ribokinase activity (GO:0004747), Biological Process: D-ribose metabolic process (GO:0006014))
AMDSBA3_47_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26787..26954
DNA (168bp) protein (56aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYK7_9FIRM (db=UNIREF evalue=1.5e-11 bit_score=73.6 identity=66.0 coverage=92.85714285714286)
Uncharacterized protein {ECO:0000313|EMBL:AEJ39029.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I9V7_SULAT
Displaying items 1-30 of 31 in total

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