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AMDSBA3_51

Alias: AMDSBA3_C50

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_51_1
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..374
DNA (372bp) protein (124aa)
Plasmid stabilization system protein n=1 Tax=uncultured bacterium RepID=D6CJV4_9BACT (db=UNIREF evalue=6.8e-12 bit_score=75.9 identity=39.1 coverage=73.38709677419355)
seg (db=Seg db_id=seg from=74 to=82)
(db=HMMPfam db_id=PF05016 from=23 to=106 evalue=1.6e-08 interpro_id=IPR007712 interpro_description=Plasmid stabilisation system)
Plasmid stabilization protein {ECO:0000313|EMBL:KFD40958.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
AMDSBA3_51_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(348..680)
DNA (333bp) protein (111aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ40428.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=5 Tax=Sulfobacillus acidophilus RepID=F8IC05_SULAT
AMDSBA3_51_3
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

960..1289
DNA (330bp) protein (110aa)
(db=HMMPfam db_id=PF03681 from=3 to=48 evalue=7.9e-14 interpro_id=IPR005357 interpro_description=Uncharacterised domain UPF0150)
TTHA1013-like (db=superfamily db_id=SSF143100 from=2 to=71 evalue=1.7e-12)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=26 evalue=5.0)
UPF0150 superfamily conserved domain protein n=1 Tax=Sulfobacillus thermotolerans RepID=G5CIX5_9FIRM
AMDSBA3_51_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1307..1633)
DNA (327bp) protein (109aa)
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family n=2 Tax=Sulfobacillus acidophilus RepID=G8TTW5_9FIRM (db=UNIREF evalue=3.3e-42 bit_score=176.4 identity=79.2 coverage=96.3302752293578)
(db=HMMPfam db_id=PF01638 from=16 to=103 evalue=2.4e-35 interpro_id=IPR002577 interpro_description=Helix-turn-helix, HxlR type)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=102 evalue=9.0e-34)
AMDSBA3_51_5
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1927..2526
DNA (600bp) protein (200aa)
flavoprotein WrbA
Flavodoxin/nitric oxide synthase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E882_9RHOB (db=UNIREF evalue=1.2e-50 bit_score=205.3 identity=50.5 coverage=95.0)
seg (db=Seg db_id=seg from=21 to=35)
no description (db=Gene3D db_id=G3DSA:3.40.50.360 from=5 to=196 evalue=1.4e-61)
AMDSBA3_51_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2886..3854)
DNA (969bp) protein (323aa)
L-threonine ammonia-lyase (EC:4.3.1.19) rbh
Threonine dehydratase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HR78_9FIRM (db=UNIREF evalue=6.4e-70 bit_score=270.0 identity=44.6 coverage=95.97523219814241)
seg (db=Seg db_id=seg from=127 to=140)
DEHYDRATASE_SER_THR (db=PatternScan db_id=PS00165 from=45 to=58 evalue=0.0 interpro_id=IPR000634 interpro_description=Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: pyridoxal phosphate binding (GO:0030170))
AMDSBA3_51_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3851..4279)
DNA (429bp) protein (143aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTW8_9FIRM (db=UNIREF evalue=1.3e-59 bit_score=234.6 identity=71.8 coverage=98.6013986013986)
Uncharacterized protein {ECO:0000313|EMBL:AEJ40984.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I5D7_SULAT
AMDSBA3_51_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4303..5190)
DNA (888bp) protein (296aa)
serine O-acetyltransferase (EC:2.3.1.30) rbh
Serine O-acetyltransferase n=10 Tax=Burkholderia RepID=A2W0V0_9BURK (db=UNIREF evalue=2.7e-54 bit_score=218.0 identity=44.5 coverage=94.25675675675676)
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=105 to=277 evalue=8.8e-39 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
no description (db=Gene3D db_id=G3DSA:2.160.10.10 from=176 to=279 evalue=2.8e-20)
AMDSBA3_51_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5183..6568)
DNA (1386bp) protein (462aa)
hypothetical protein
Peptidase M20 n=1 Tax=Meiothermus ruber DSM 1279 RepID=D3PQI2_MEIRD (db=UNIREF evalue=9.4e-115 bit_score=419.5 identity=48.3 coverage=96.75324675324676)
seg (db=Seg db_id=seg from=229 to=240)
seg (db=Seg db_id=seg from=379 to=388)
AMDSBA3_51_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6638..7927)
DNA (1290bp) protein (430aa)
natural resistance-associated macrophage protein
Membrane transport protein n=6 Tax=Mycobacterium abscessus subgroup RepID=G6XE02_MYCAB (db=UNIREF evalue=2.3e-38 bit_score=165.6 identity=28.6 coverage=92.79069767441861)
transmembrane_regions (db=TMHMM db_id=tmhmm from=343 to=365)
transmembrane_regions (db=TMHMM db_id=tmhmm from=370 to=392)
AMDSBA3_51_11
unknown

Not on your lists

7955..8272
DNA (318bp) protein (106aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
seg (db=Seg db_id=seg from=30 to=42)
AMDSBA3_51_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8407..9681
DNA (1275bp) protein (425aa)
metal dependent phosphohydrolase rbh
metal dependent phosphohydrolase rbh
Uncharacterized protein MG461 homolog n=3 Tax=Mycoplasma pneumoniae RepID=Y677_MYCPN (db=UNIREF evalue=1.2e-28 bit_score=133.3 identity=30.4 coverage=72.0)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=7 to=414 evalue=2.2e-97)
AMDSBA3_51_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9700..10035
DNA (336bp) protein (112aa)
chaperonin involved in protein secretion
Export-related chaperone CsaA n=4 Tax=Comamonas testosteroni RepID=B7X456_COMTE (db=UNIREF evalue=1.9e-21 bit_score=107.5 identity=50.5 coverage=93.75)
chap_CsaA: export-related chaperone CsaA (db=HMMTigr db_id=TIGR02222 from=6 to=111 evalue=4.6e-54 interpro_id=IPR008231 interpro_description=Secretion chaperone CsaA)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=3 to=110 evalue=3.0e-30 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
AMDSBA3_51_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10060..11055
DNA (996bp) protein (332aa)
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 n=1 Tax=Isosphaera pallida ATCC 43644 RepID=E8R4G7_ISOPI (db=UNIREF evalue=1.4e-08 bit_score=66.2 identity=30.2 coverage=63.85542168674698)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=2 to=323 evalue=7.2e-49)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=323 evalue=1.7e-38)
AMDSBA3_51_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11043..12365
DNA (1323bp) protein (441aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTX6_9FIRM (db=UNIREF evalue=4.3e-117 bit_score=427.2 identity=51.9 coverage=97.95918367346938)
seg (db=Seg db_id=seg from=305 to=316)
AMDSBA3_51_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12395..13408
DNA (1014bp) protein (338aa)
yogA; alcohol dehydrogenase zinc-binding domain-containing protein
seg (db=Seg db_id=seg from=250 to=267)
seg (db=Seg db_id=seg from=168 to=181)
ALCOHOL DEHYDROGENASE RELATED (db=HMMPanther db_id=PTHR11695 from=14 to=337 evalue=7.1e-95 interpro_id=IPR002085 interpro_description=Alcohol dehydrogenase superfamily, zinc-type GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA3_51_17
unknown

Not on your lists

comp(13640..14575)
DNA (936bp) protein (312aa)
13640..14575 - ( gc_cont=0.574)
AMDSBA3_51_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14668..16056)
DNA (1389bp) protein (463aa)
cusS; signal transduction histidine kinase rbh
Sensor histidine kinase/response regulator n=2 Tax=Prevotella bivia RepID=D1XY87_9BACT (db=UNIREF evalue=5.3e-25 bit_score=121.3 identity=28.7 coverage=69.76241900647948)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=179)
AMDSBA3_51_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16058..16732)
DNA (675bp) protein (225aa)
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family n=1 Tax=Desulfitobacterium dichloroeliminans LMG P-21439 RepID=H1IJ18_9FIRM (db=UNIREF evalue=4.5e-38 bit_score=163.7 identity=42.1 coverage=99.11111111111111)
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) (db=HMMPanther db_id=PTHR23283:SF21 from=2 to=124 evalue=8.0e-30)
CheY-like (db=superfamily db_id=SSF52172 from=2 to=190 evalue=1.5e-42 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
AMDSBA3_51_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16732..17124)
DNA (393bp) protein (131aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTY1_9FIRM (db=UNIREF evalue=1.4e-55 bit_score=221.1 identity=79.2 coverage=98.47328244274809)
seg (db=Seg db_id=seg from=82 to=90)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I4X4_SULAT
AMDSBA3_51_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17364..17963
DNA (600bp) protein (200aa)
manganese/iron superoxide dismutase rbh
manganese/iron superoxide dismutase rbh
Manganese/iron superoxide dismutase n=2 Tax=Sulfobacillus acidophilus RepID=G8TTY2_9FIRM (db=UNIREF evalue=1.4e-104 bit_score=384.4 identity=91.5 coverage=99.0)
AMDSBA3_51_22
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18023..18982)
DNA (960bp) protein (320aa)
Membrane protease subunits, stomatin/prohibitin homologs
HflK protein n=6 Tax=Enterobacteriaceae RepID=G7LW29_9ENTR (db=UNIREF evalue=3.8e-14 bit_score=84.7 identity=23.0 coverage=88.125)
seg (db=Seg db_id=seg from=245 to=251)
seg (db=Seg db_id=seg from=4 to=18)
AMDSBA3_51_23
unknown

Not on your lists

comp(18987..19202)
DNA (216bp) protein (72aa)
(db=HMMPfam db_id=PF01957 from=5 to=68 evalue=2.2e-08 interpro_id=IPR002810 interpro_description=Nodulation efficiency, NfeD)
AMDSBA3_51_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19268..20332)
DNA (1065bp) protein (355aa)
phosphoesterase rbh
phosphoesterase rbh
Phosphoesterase n=2 Tax=Sulfobacillus acidophilus RepID=G8TTY6_9FIRM (db=UNIREF evalue=8.3e-103 bit_score=379.4 identity=55.2 coverage=93.52112676056338)
AMDSBA3_51_25
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20329..21519)
DNA (1191bp) protein (397aa)
FAD dependent oxidoreductase
Oxidoreductase, FAD-binding n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L3F1_9GAMM (db=UNIREF evalue=6.8e-37 bit_score=160.6 identity=31.3 coverage=93.19899244332494)
seg (db=Seg db_id=seg from=180 to=189)
seg (db=Seg db_id=seg from=64 to=76)
AMDSBA3_51_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21713..22804
DNA (1092bp) protein (364aa)
homoserine O-acetyltransferase (EC:2.3.1.31) rbh
Homoserine O-acetyltransferase n=6 Tax=Thermus RepID=METX_THET2 (db=UNIREF evalue=1.9e-54 bit_score=218.8 identity=38.4 coverage=90.10989010989012)
homoserO_Ac_trn: homoserine O-acetylt (db=HMMTigr db_id=TIGR01392 from=24 to=359 evalue=1.2e-89 interpro_id=IPR008220 interpro_description=Homoserine acetyltransferase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: O-acetyltransferase activity (GO:0016413))
Homoserine acetyltransferase (db=HMMPIR db_id=PIRSF000443 from=2 to=362 evalue=4.3e-74 interpro_id=IPR008220 interpro_description=Homoserine acetyltransferase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: O-acetyltransferase activity (GO:0016413))
AMDSBA3_51_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23118..23681
DNA (564bp) protein (188aa)
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TTZ6_9FIRM (db=UNIREF evalue=2.4e-53 bit_score=214.2 identity=60.3 coverage=92.02127659574468)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=17 to=183 evalue=1.3e-32 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=21 to=182 evalue=5.5e-33 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA3_51_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23662..24231)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTZ7_9FIRM (db=UNIREF evalue=2.8e-49 bit_score=200.7 identity=53.7 coverage=97.89473684210527)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I4V7_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ40954.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA3_51_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24347..24796
DNA (450bp) protein (150aa)
seg (db=Seg db_id=seg from=51 to=66)
Cytochrome c (db=superfamily db_id=SSF46626 from=1 to=145 evalue=1.5e-17 interpro_id=IPR009056 interpro_description=Cytochrome c domain GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: heme binding (GO:0020037))
(db=HMMPfam db_id=PF00034 from=71 to=143 evalue=2.6e-07 interpro_id=IPR003088 interpro_description=Cytochrome c, class I GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: heme binding (GO:0020037))
no description (db=Gene3D db_id=G3DSA:1.10.760.10 from=67 to=145 evalue=3.3e-07 interpro_id=IPR009056 interpro_description=Cytochrome c domain GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: heme binding (GO:0020037))
AMDSBA3_51_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25107..26105
DNA (999bp) protein (333aa)
cobalamin biosynthesis protein CbiB rbh
Cobalamin biosynthesis protein CobD n=4 Tax=Leptospira RepID=COBD_LEPIC (db=UNIREF evalue=2.8e-44 bit_score=184.9 identity=33.7 coverage=92.1921921921922)
seg (db=Seg db_id=seg from=296 to=307)
seg (db=Seg db_id=seg from=69 to=86)
Displaying items 1-30 of 39 in total

View Taxonomy