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AMDSBA3_52

Alias: AMDSBA3_C51

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_52_1
R_PER_ii_51_15, PER-ii, Bacteria

Not on your lists

comp(445..1740)
DNA (1296bp) protein (432aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLM7_9FIRM (db=UNIREF evalue=2.0e-42 bit_score=179.1 identity=45.3 coverage=54.861111111111114)
seg (db=Seg db_id=seg from=305 to=317)
seg (db=Seg db_id=seg from=52 to=62)
Fic-like (db=superfamily db_id=SSF140931 from=245 to=429 evalue=1.2e-51)
AMDSBA3_52_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2207..3073)
DNA (867bp) protein (289aa)
Protoheme IX farnesyltransferase rbh
Protoheme IX farnesyltransferase rbh
Protoheme IX farnesyltransferase 2 n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ02_9FIRM (db=UNIREF evalue=3.0e-119 bit_score=433.7 identity=71.3 coverage=98.26989619377161)
AMDSBA3_52_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3335..3925)
DNA (591bp) protein (197aa)
phage SPO1 DNA polymerase-related protein
Uracil-DNA glycosylase n=2 Tax=Geobacter sulfurreducens RepID=D7AHQ9_GEOSK (db=UNIREF evalue=2.2e-36 bit_score=157.9 identity=46.3 coverage=87.81725888324873)
seg (db=Seg db_id=seg from=108 to=119)
UDG_fam4: uracil-DNA glycosylase, family (db=HMMTigr db_id=TIGR00758 from=12 to=182 evalue=4.5e-69 interpro_id=IPR005273 interpro_description=Uracil-DNA glycosylase, family 4 domain)
AMDSBA3_52_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3933..4355)
DNA (423bp) protein (141aa)
vitamin K epoxide reductase
Vitamin K epoxide reductase n=2 Tax=Sulfobacillus acidophilus RepID=G8U069_9FIRM (db=UNIREF evalue=1.6e-17 bit_score=94.7 identity=45.2 coverage=85.81560283687944)
seg (db=Seg db_id=seg from=54 to=77)
seg (db=Seg db_id=seg from=32 to=43)
AMDSBA3_52_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4363..5556)
DNA (1194bp) protein (398aa)
2-oxoglutarate dehydrogenase E2 component (EC:2.3.1.61) rbh
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=7 Tax=Sinorhizobium RepID=ODP2_RHIME (db=UNIREF evalue=7.2e-47 bit_score=193.7 identity=31.8 coverage=98.49246231155779)
seg (db=Seg db_id=seg from=59 to=70)
seg (db=Seg db_id=seg from=77 to=95)
AMDSBA3_52_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5556..8396)
DNA (2841bp) protein (947aa)
2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CE99_THET1 (db=UNIREF evalue=1.8e-274 bit_score=951.0 identity=52.3 coverage=97.2544878563886)
AMDSBA3_52_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8807..9328
DNA (522bp) protein (174aa)
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAK5_9BACT (db=UNIREF evalue=4.9e-08 bit_score=63.5 identity=29.7 coverage=91.37931034482759)
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=10 to=164 evalue=1.3e-36 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=8 to=102 evalue=8.9e-18 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto
AMDSBA3_52_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9325..10887
DNA (1563bp) protein (521aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U075_9FIRM (db=UNIREF evalue=2.4e-122 bit_score=444.9 identity=43.7 coverage=92.7063339731286)
seg (db=Seg db_id=seg from=420 to=435)
AMDSBA3_52_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10892..12034)
DNA (1143bp) protein (381aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1K7_ACIFD (db=UNIREF evalue=1.4e-111 bit_score=408.7 identity=55.6 coverage=99.47506561679789)
seg (db=Seg db_id=seg from=258 to=274)
AMDSBA3_52_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12100..12420)
DNA (321bp) protein (107aa)
Sterol-binding domain-containing protein
Sterol-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LS95_HALO1 (db=UNIREF evalue=1.0e-08 bit_score=65.1 identity=37.6 coverage=90.65420560747664)
seg (db=Seg db_id=seg from=42 to=52)
NONSPECIFIC LIPID-TRANSFER PROTEIN (STEROL CARRIER PROTEIN X) (db=HMMPanther db_id=PTHR19410:SF115 from=61 to=94 evalue=5.7e-06)
AMDSBA3_52_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12464..13603)
DNA (1140bp) protein (380aa)
acyl-CoA dehydrogenase rbh
acyl-CoA dehydrogenase rbh
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5Y0_9BACI (db=UNIREF evalue=9.1e-124 bit_score=449.1 identity=58.2 coverage=99.47368421052632)
AMDSBA3_52_12
Paulinella chromatophora, Paulinella, Euglyphida, Eukaryota

Not on your lists

comp(13692..14690)
DNA (999bp) protein (333aa)
abortive infection protein
Abortive infection protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XVS4_PSEMY (db=UNIREF evalue=1.7e-09 bit_score=69.3 identity=32.4 coverage=62.46246246246246)
transmembrane_regions (db=TMHMM db_id=tmhmm from=273 to=295)
transmembrane_regions (db=TMHMM db_id=tmhmm from=308 to=330)
AMDSBA3_52_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14752..15354
DNA (603bp) protein (201aa)
SOS-response transcriptional repressor, LexA
LexA repressor n=2 Tax=Sulfobacillus acidophilus RepID=G8U080_9FIRM (db=UNIREF evalue=6.2e-63 bit_score=246.1 identity=64.5 coverage=96.51741293532339)
lexA: repressor LexA (db=HMMTigr db_id=TIGR00498 from=5 to=200 evalue=4.4e-49 interpro_id=IPR006200 interpro_description=Peptidase S24, LexA repressor GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
no description (db=Gene3D db_id=G3DSA:2.10.109.10 from=85 to=198 evalue=3.4e-34 interpro_id=IPR011056 interpro_description=Peptidase S24/S26A/S26B/S26C, beta-ribbon domain)
AMDSBA3_52_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15349..16503)
DNA (1155bp) protein (385aa)
aluminum resistance family protein rbh
Aluminium resistance family protein n=3 Tax=Clostridium carboxidivorans P7 RepID=C6PTQ6_9CLOT (db=UNIREF evalue=1.8e-74 bit_score=285.4 identity=40.4 coverage=98.18181818181819)
seg (db=Seg db_id=seg from=78 to=87)
(db=HMMPfam db_id=PF06838 from=3 to=381 evalue=1.6e-117 interpro_id=IPR009651 interpro_description=Aluminium resistance)
AMDSBA3_52_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16574..17182)
DNA (609bp) protein (203aa)
seg (db=Seg db_id=seg from=104 to=118)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=192 evalue=1.5e-12)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=3 to=201 evalue=3.4e-08)
(db=HMMPfam db_id=PF01926 from=56 to=127 evalue=3.8e-06 interpro_id=IPR006073 interpro_description=GTP binding domain GO=Molecular Function: GTP binding (GO:0005525))
AMDSBA3_52_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17182..18168)
DNA (987bp) protein (329aa)
AAA ATPase rbh
AAA ATPase rbh
AAA ATPase, central domain protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I5X8_SULAT (db=UNIREF evalue=1.6e-116 bit_score=424.9 identity=66.0 coverage=97.26443768996961)
AMDSBA3_52_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18530..19366
DNA (837bp) protein (279aa)
cwlJ; cell wall hydrolase SleB
cell wall hydrolase, SleB n=2 Tax=Paenibacillus larvae subsp. larvae RepID=UPI0001693CC6 (db=UNIREF evalue=3.9e-23 bit_score=114.4 identity=51.8 coverage=39.06810035842294)
seg (db=Seg db_id=seg from=183 to=192)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
AMDSBA3_52_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19363..20298)
DNA (936bp) protein (312aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase rbh
tRNA dimethylallyltransferase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEY6_9FIRM (db=UNIREF evalue=7.4e-47 bit_score=193.4 identity=37.6 coverage=94.87179487179486)
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=12 to=296 evalue=2.1e-80 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase GO=Biological Process: tRNA processing (GO:0008033))
(db=HMMPfam db_id=PF01715 from=45 to=292 evalue=9.7e-68 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
AMDSBA3_52_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20282..21979)
DNA (1698bp) protein (566aa)
mutL; DNA mismatch repair protein MutL
DNA mismatch repair protein mutL n=2 Tax=Nostocaceae RepID=MUTL_ANAVT (db=UNIREF evalue=4.2e-24 bit_score=118.6 identity=27.6 coverage=53.71024734982333)
seg (db=Seg db_id=seg from=507 to=517)
DNA_MISMATCH_REPAIR_1 (db=PatternScan db_id=PS00058 from=94 to=100 evalue=0.0 interpro_id=IPR014762 interpro_description=DNA mismatch repair, conserved site)
AMDSBA3_52_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21979..24510)
DNA (2532bp) protein (844aa)
DNA mismatch repair protein MutS rbh
DNA mismatch repair protein MutS rbh
DNA mismatch repair protein MutS n=2 Tax=spotted fever group RepID=MUTS_RICAH (db=UNIREF evalue=3.6e-19 bit_score=102.8 identity=44.4 coverage=13.38862559241706)
coiled-coil (db=Coil db_id=coil from=431 to=452 evalue=NA)
AMDSBA3_52_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24507..25250)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U088_9FIRM (db=UNIREF evalue=7.0e-40 bit_score=169.9 identity=38.6 coverage=96.37096774193549)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=107 to=245 evalue=3.3e-12)
no description (db=Gene3D db_id=G3DSA:3.30.420.150 from=106 to=236 evalue=2.2e-08)
(db=HMMPfam db_id=PF02541 from=90 to=126 evalue=5.0e-06 interpro_id=IPR003695 interpro_description=Ppx/GppA phosphatase)
Displaying 21 items

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