ggKbase home page

AMDSBA3_76

Alias: AMDSBA3_C75

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_76_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(723..1664)
DNA (942bp) protein (314aa)
hypothetical protein
Putative uncharacterized protein n=4 Tax=Bacillus cereus group RepID=C2SJ69_BACCE (db=UNIREF evalue=1.8e-32 bit_score=145.6 identity=29.8 coverage=92.35668789808918)
seg (db=Seg db_id=seg from=280 to=289)
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=12 to=287 evalue=1.2e-08 interpro_id=IPR011009 interpro_description=Protein kinase-like domain GO=Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772))
AMDSBA3_76_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1938..2525
DNA (588bp) protein (196aa)
rhomboid protease
Rhomboid protease n=2 Tax=Sulfobacillus acidophilus RepID=G8TVA9_9FIRM (db=UNIREF evalue=1.1e-43 bit_score=182.2 identity=50.8 coverage=96.93877551020408)
seg (db=Seg db_id=seg from=174 to=187)
transmembrane_regions (db=TMHMM db_id=tmhmm from=129 to=146)
AMDSBA3_76_3
unknown

Not on your lists

comp(2840..3493)
DNA (654bp) protein (218aa)
seg (db=Seg db_id=seg from=163 to=184)
seg (db=Seg db_id=seg from=28 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=195 to=214)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=180)
AMDSBA3_76_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3714..4997
DNA (1284bp) protein (428aa)
D12 class N6 adenine-specific DNA methyltransferase
D12 class N6 adenine-specific DNA methyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSL1_9FIRM (db=UNIREF evalue=9.2e-149 bit_score=532.3 identity=66.2 coverage=96.26168224299066)
seg (db=Seg db_id=seg from=103 to=121)
AMDSBA3_76_5
unknown

Not on your lists

5053..5601
DNA (549bp) protein (183aa)
5053..5601 + ( gc_cont=0.561)
AMDSBA3_76_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5646..6119)
DNA (474bp) protein (158aa)
seg (db=Seg db_id=seg from=120 to=130)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=131 evalue=4.8e-24)
no description (db=HMMSmart db_id=SM00347 from=17 to=117 evalue=4.0e-16 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF01047 from=25 to=82 evalue=1.3e-12 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA3_76_7
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(6234..8516)
DNA (2283bp) protein (761aa)
peptidase S45 family protein
N-terminal nucleophile aminohydrolases (Ntn hydrolases) (db=superfamily db_id=SSF56235 from=34 to=743 evalue=1.3e-165)
seg (db=Seg db_id=seg from=16 to=24)
seg (db=Seg db_id=seg from=216 to=237)
AMDSBA3_76_8
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8622..9158
DNA (537bp) protein (179aa)
msrAB; peptide methionine sulfoxide reductase MsrA/MsrB (EC:1.8.4.11 1.8.4.12)
Peptide methionine sulfoxide reductase MsrA n=2 Tax=Lactobacillus sakei RepID=MSRA_LACSS (db=UNIREF evalue=3.5e-57 bit_score=226.9 identity=60.8 coverage=94.97206703910615)
msrA: peptide-methionine (S)-S-oxide reducta (db=HMMTigr db_id=TIGR00401 from=5 to=161 evalue=1.3e-90 interpro_id=IPR002569 interpro_description=Peptide methionine sulphoxide reductase MsrA GO=Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671), Biological Process: protein metabolic process (GO:0019538), Biological Process: oxidation-reduction process (GO:0055114))
Peptide methionine sulfoxide reductase (db=superfamily db_id=SSF55068 from=4 to=170 evalue=7.4e-72 interpro_id=IPR002569 interpro_description=Peptide methionine sulphoxide reductase MsrA GO=Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671), Biological Process: protein metabolic process (GO:0019538), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA3_76_9
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9151..9498
DNA (348bp) protein (116aa)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=115 evalue=1.8e-19)
no description (db=Gene3D db_id=G3DSA:3.10.180.10 from=1 to=112 evalue=2.7e-08)
(db=HMMPfam db_id=PF00903 from=4 to=110 evalue=1.6e-05 interpro_id=IPR004360 interpro_description=Glyoxalase/fosfomycin resistance/dioxygenase)
glyoxalase/bleomycin resistance protein/dioxygenase
AMDSBA3_76_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9519..10235
DNA (717bp) protein (239aa)
cobC2; hypothetical protein
Phosphoglycerate mutase n=2 Tax=Leuconostoc RepID=D8MG57_LEUGT (db=UNIREF evalue=1.7e-11 bit_score=75.5 identity=25.0 coverage=81.17154811715481)
seg (db=Seg db_id=seg from=27 to=48)
PG_MUTASE (db=PatternScan db_id=PS00175 from=44 to=53 evalue=0.0 interpro_id=IPR001345 interpro_description=Phosphoglycerate/bisphosphoglycerate mutase, active site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBA3_76_11
unknown

Not on your lists

comp(10386..11435)
DNA (1050bp) protein (350aa)
seg (db=Seg db_id=seg from=2 to=19)
Sialidases (db=superfamily db_id=SSF50939 from=241 to=340 evalue=7.3e-07 interpro_id=IPR011040 interpro_description=Neuraminidase)
AMDSBA3_76_12
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11729..12694)
DNA (966bp) protein (322aa)
aldo/keto reductase
Aldo/keto reductase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIE3_CLOPH (db=UNIREF evalue=9.9e-55 bit_score=219.5 identity=40.8 coverage=96.27329192546584)
NAD(P)-linked oxidoreductase (db=superfamily db_id=SSF51430 from=1 to=321 evalue=6.2e-65 interpro_id=IPR023210 interpro_description=NADP-dependent oxidoreductase domain)
no description (db=Gene3D db_id=G3DSA:3.20.20.100 from=1 to=321 evalue=4.4e-62 interpro_id=IPR023210 interpro_description=NADP-dependent oxidoreductase domain)
Displaying 12 items

View Taxonomy