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AMDSBA3_83

Alias: AMDSBA3_C82

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_83_1
unknown

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3..239
DNA (237bp) protein (79aa)
3..239 + ( gc_cont=0.464)
AMDSBA3_83_2
Brevibacillus agri, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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253..1479
DNA (1227bp) protein (409aa)
hypothetical protein
Major facilitator superfamily (MFS) transporter n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IP19_KORVE (db=UNIREF evalue=1.5e-31 bit_score=142.9 identity=27.8 coverage=92.1760391198044)
transmembrane_regions (db=TMHMM db_id=tmhmm from=310 to=332)
transmembrane_regions (db=TMHMM db_id=tmhmm from=345 to=367)
AMDSBA3_83_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2050..2442)
DNA (393bp) protein (131aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUX1_9FIRM (db=UNIREF evalue=3.7e-40 bit_score=169.9 identity=61.4 coverage=96.18320610687023)
seg (db=Seg db_id=seg from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=126)
AMDSBA3_83_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2746..3570)
DNA (825bp) protein (275aa)
L-fuculose 1-phosphate aldolase (EC:4.1.2.17)
seg (db=Seg db_id=seg from=70 to=81)
seg (db=Seg db_id=seg from=22 to=35)
AraD-like aldolase/epimerase (db=superfamily db_id=SSF53639 from=60 to=265 evalue=2.4e-49 interpro_id=IPR001303 interpro_description=Class II aldolase/adducin N-terminal GO=Molecular Function: metal ion binding (GO:0046872))
AMDSBA3_83_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3609..4781)
DNA (1173bp) protein (391aa)
major facilitator superfamily transporter rbh
major facilitator superfamily transporter rbh
Major facilitator superfamily MFS_1 n=3 Tax=Acidiphilium RepID=A5G124_ACICJ (db=UNIREF evalue=2.4e-79 bit_score=301.6 identity=43.1 coverage=93.60613810741688)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=294)
AMDSBA3_83_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4897..6180)
DNA (1284bp) protein (428aa)
adenylosuccinate synthetase (EC:6.3.4.4) rbh
adenylosuccinate synthetase (EC:6.3.4.4) rbh
Adenylosuccinate synthetase n=13 Tax=Clostridium RepID=PURA_CLOB1 (db=UNIREF evalue=6.0e-132 bit_score=476.5 identity=55.1 coverage=99.29906542056075)
seg (db=Seg db_id=seg from=403 to=413)
AMDSBA3_83_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6197..7528)
DNA (1332bp) protein (444aa)
replicative DNA helicase
replicative DNA helicase
Replicative DNA helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL41_9PLAN (db=UNIREF evalue=5.3e-83 bit_score=313.9 identity=36.9 coverage=98.42342342342343)
AMDSBA3_83_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7525..9414)
DNA (1890bp) protein (630aa)
Lon-like ATP-dependent protease
Lon-like ATP-dependent protease
Peptidase S16, lon domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRJ9_9FIRM (db=UNIREF evalue=2.3e-196 bit_score=691.0 identity=56.4 coverage=96.03174603174604)
coiled-coil (db=Coil db_id=coil from=102 to=123 evalue=NA)
AMDSBA3_83_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9420..9875)
DNA (456bp) protein (152aa)
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 n=1 Tax=Elusimicrobium minutum Pei191 RepID=RL9_ELUMP (db=UNIREF evalue=7.8e-18 bit_score=95.9 identity=36.1 coverage=94.73684210526315)
seg (db=Seg db_id=seg from=63 to=75)
seg (db=Seg db_id=seg from=49 to=62)
AMDSBA3_83_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10132..10362)
DNA (231bp) protein (77aa)
30S ribosomal protein S18
30S ribosomal protein S18 n=1 Tax=Acidothermus cellulolyticus 11B RepID=RS18_ACIC1 (db=UNIREF evalue=5.2e-18 bit_score=95.5 identity=58.1 coverage=94.8051948051948)
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479:SF16 from=1 to=76 evalue=1.3e-30)
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479 from=1 to=76 evalue=1.3e-30 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
AMDSBA3_83_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10386..10772)
DNA (387bp) protein (129aa)
single-strand binding protein
Single-stranded DNA-binding protein n=4 Tax=Mobiluncus mulieris RepID=C2KT08_9ACTO (db=UNIREF evalue=1.7e-13 bit_score=81.3 identity=43.0 coverage=73.64341085271317)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=128 evalue=1.1e-47 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=111 evalue=2.9e-38 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
AMDSBA3_83_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10790..11077)
DNA (288bp) protein (96aa)
30S ribosomal protein S6
30S ribosomal protein S6 n=1 Tax=Acidothermus cellulolyticus 11B RepID=RS6_ACIC1 (db=UNIREF evalue=4.8e-13 bit_score=79.3 identity=40.4 coverage=96.875)
(db=HMMPfam db_id=PF01250 from=3 to=92 evalue=5.6e-31 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=95 evalue=7.7e-30 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Displaying 12 items

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