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AMDSBA3_83

Alias: AMDSBA3_C82

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA3_83_1
unknown

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3..239
-----------------
DNA (237bp)
protein (79aa)
3..239 + ( gc_cont=0.464)
AMDSBA3_83_2
Brevibacillus agri, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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253..1479
-----------------
DNA (1227bp)
protein (409aa)
hypothetical protein
Major facilitator superfamily (MFS) transporter n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IP19_KORVE (db=UNIREF evalue=1.5e-31 bit_score=142.9 identity=27.8 coverage=92.1760391198044)
transmembrane_regions (db=TMHMM db_id=tmhmm from=310 to=332)
transmembrane_regions (db=TMHMM db_id=tmhmm from=345 to=367)
AMDSBA3_83_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2050..2442)
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUX1_9FIRM (db=UNIREF evalue=3.7e-40 bit_score=169.9 identity=61.4 coverage=96.18320610687023)
seg (db=Seg db_id=seg from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=126)
AMDSBA3_83_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2746..3570)
-----------------
DNA (825bp)
protein (275aa)
L-fuculose 1-phosphate aldolase (EC:4.1.2.17)
seg (db=Seg db_id=seg from=70 to=81)
seg (db=Seg db_id=seg from=22 to=35)
AraD-like aldolase/epimerase (db=superfamily db_id=SSF53639 from=60 to=265 evalue=2.4e-49 interpro_id=IPR001303 interpro_description=Class II aldolase/adducin N-terminal GO=Molecular Function: metal ion binding (GO:0046872))
AMDSBA3_83_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3609..4781)
-----------------
DNA (1173bp)
protein (391aa)
major facilitator superfamily transporter rbh
major facilitator superfamily transporter rbh
Major facilitator superfamily MFS_1 n=3 Tax=Acidiphilium RepID=A5G124_ACICJ (db=UNIREF evalue=2.4e-79 bit_score=301.6 identity=43.1 coverage=93.60613810741688)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=294)
AMDSBA3_83_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4897..6180)
-----------------
DNA (1284bp)
protein (428aa)
adenylosuccinate synthetase (EC:6.3.4.4) rbh
adenylosuccinate synthetase (EC:6.3.4.4) rbh
Adenylosuccinate synthetase n=13 Tax=Clostridium RepID=PURA_CLOB1 (db=UNIREF evalue=6.0e-132 bit_score=476.5 identity=55.1 coverage=99.29906542056075)
seg (db=Seg db_id=seg from=403 to=413)
AMDSBA3_83_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6197..7528)
-----------------
DNA (1332bp)
protein (444aa)
replicative DNA helicase
replicative DNA helicase
Replicative DNA helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL41_9PLAN (db=UNIREF evalue=5.3e-83 bit_score=313.9 identity=36.9 coverage=98.42342342342343)
AMDSBA3_83_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7525..9414)
-----------------
DNA (1890bp)
protein (630aa)
Lon-like ATP-dependent protease
Lon-like ATP-dependent protease
Peptidase S16, lon domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRJ9_9FIRM (db=UNIREF evalue=2.3e-196 bit_score=691.0 identity=56.4 coverage=96.03174603174604)
coiled-coil (db=Coil db_id=coil from=102 to=123 evalue=NA)
AMDSBA3_83_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9420..9875)
-----------------
DNA (456bp)
protein (152aa)
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 n=1 Tax=Elusimicrobium minutum Pei191 RepID=RL9_ELUMP (db=UNIREF evalue=7.8e-18 bit_score=95.9 identity=36.1 coverage=94.73684210526315)
seg (db=Seg db_id=seg from=63 to=75)
seg (db=Seg db_id=seg from=49 to=62)
AMDSBA3_83_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10132..10362)
-----------------
DNA (231bp)
protein (77aa)
BSCG--ribosomal--protein--S18
30S ribosomal protein S18
30S ribosomal protein S18 n=1 Tax=Acidothermus cellulolyticus 11B RepID=RS18_ACIC1 (db=UNIREF evalue=5.2e-18 bit_score=95.5 identity=58.1 coverage=94.8051948051948)
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479:SF16 from=1 to=76 evalue=1.3e-30)
AMDSBA3_83_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10386..10772)
-----------------
DNA (387bp)
protein (129aa)
single-strand binding protein
Single-stranded DNA-binding protein n=4 Tax=Mobiluncus mulieris RepID=C2KT08_9ACTO (db=UNIREF evalue=1.7e-13 bit_score=81.3 identity=43.0 coverage=73.64341085271317)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=128 evalue=1.1e-47 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=111 evalue=2.9e-38 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
AMDSBA3_83_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10790..11077)
-----------------
DNA (288bp)
protein (96aa)
BSCG--ribosomal--protein--S6
30S ribosomal protein S6
30S ribosomal protein S6 n=1 Tax=Acidothermus cellulolyticus 11B RepID=RS6_ACIC1 (db=UNIREF evalue=4.8e-13 bit_score=79.3 identity=40.4 coverage=96.875)
(db=HMMPfam db_id=PF01250 from=3 to=92 evalue=5.6e-31 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Displaying 12 items

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