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AMDSBA3_101

Alias: AMDSBA3_C100

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA3_101_1
unknown

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comp(79..210)
-----------------
DNA (132bp)
protein (44aa)
seg (db=Seg db_id=seg from=21 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
AMDSBA3_101_2
unknown

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comp(317..478)
-----------------
DNA (162bp)
protein (54aa)
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=53 evalue=5.2e-06 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
AMDSBA3_101_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(575..781)
-----------------
DNA (207bp)
protein (69aa)
seg (db=Seg db_id=seg from=25 to=35)
COPPER-TRANSPORTING ATPASE P-TYPE (COPA) (db=HMMPanther db_id=PTHR11939:SF39 from=1 to=68 evalue=5.5e-14)
HMA_1 (db=PatternScan db_id=PS01047 from=8 to=37 evalue=0.0 interpro_id=IPR017969 interpro_description=Heavy-metal-associated, conserved site GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=67 evalue=7.1e-20 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
AMDSBA3_101_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(763..2802)
-----------------
DNA (2040bp)
protein (680aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4)
Copper-transporting ATPase 1 n=84 Tax=Eutheria RepID=ATP7A_HUMAN (db=UNIREF evalue=1.1e-60 bit_score=240.4 identity=37.3 coverage=50.294117647058826)
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=282 to=304)
AMDSBA3_101_5
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(3155..3397)
-----------------
DNA (243bp)
protein (81aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6H1_9FIRM (db=UNIREF evalue=7.1e-10 bit_score=68.6 identity=40.0 coverage=96.29629629629629)
(db=HMMPfam db_id=PF02583 from=2 to=76 evalue=1.8e-26 interpro_id=IPR003735 interpro_description=Protein of unknown function DUF156)
Uncharacterized protein n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VHE4_9PROT
AMDSBA3_101_6
unknown

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comp(3544..3702)
-----------------
DNA (159bp)
protein (53aa)
3544..3702 - ( gc_cont=0.642)
AMDSBA3_101_7
unknown

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comp(4119..4349)
-----------------
DNA (231bp)
protein (77aa)
4119..4349 - ( gc_cont=0.606)
AMDSBA3_101_8
unknown

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5073..5528
-----------------
DNA (456bp)
protein (152aa)
hypothetical protein
seg (db=Seg db_id=seg from=4 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=117 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=88 to=107)
AMDSBA3_101_9
unknown

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comp(5680..5925)
-----------------
DNA (246bp)
protein (82aa)
seg (db=Seg db_id=seg from=3 to=10)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
(db=HMMPfam db_id=PF09851 from=3 to=71 evalue=1.9e-12 interpro_id=IPR018649 interpro_description=Protein of unknown function DUF2078, membrane)
AMDSBA3_101_10
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6302..7423
-----------------
DNA (1122bp)
protein (374aa)
Putative cell wall binding repeat 2-containing protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFE7_9FIRM (db=UNIREF evalue=1.0e-39 bit_score=169.9 identity=36.0 coverage=85.02673796791443)
cell wall binding repeat 2-containing protein (db=KEGG evalue=1.8e-39 bit_score=168.7 identity=32.2 coverage=89.03743315508021)
seg (db=Seg db_id=seg from=134 to=145)
AMDSBA3_101_11
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7420..8109)
-----------------
DNA (690bp)
protein (230aa)
Resolvase-like protein n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ32_9FIRM (db=UNIREF evalue=5.2e-90 bit_score=336.3 identity=90.1 coverage=83.04347826086956)
resolvase domain-containing protein
seg (db=Seg db_id=seg from=87 to=96)
Displaying 11 items

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