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This organism can only be binned in the context of its binning project CG02_land_8_20_14_3_00_150. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

AMDSBA3_105

Alias: AMDSBA3_C104

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Displaying 8 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_105_1
unknown

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comp(91..330)
DNA (240bp) protein (80aa)
91..330 - ( gc_cont=0.692)
AMDSBA3_105_2
unknown

Not on your lists

comp(548..898)
DNA (351bp) protein (117aa)
548..898 - ( gc_cont=0.538)
AMDSBA3_105_3
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(921..1355)
DNA (435bp) protein (145aa)
Putative conjugation protein n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ12_9FIRM (db=UNIREF evalue=5.2e-27 bit_score=126.3 identity=45.3 coverage=98.62068965517241)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=76 to=95)
AMDSBA3_105_4
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1367..1807)
DNA (441bp) protein (147aa)
Putative conjugation protein n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ12_9FIRM (db=UNIREF evalue=1.1e-32 bit_score=145.2 identity=51.0 coverage=96.5986394557823)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=59 to=81)
AMDSBA3_105_5
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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2027..2809
DNA (783bp) protein (261aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A7Z0_THEAQ (db=UNIREF evalue=3.4e-45 bit_score=187.6 identity=42.4 coverage=90.03831417624522)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNN7_DESMR
AMDSBA3_105_6
unknown

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3214..3510
DNA (297bp) protein (99aa)
seg (db=Seg db_id=seg from=80 to=94)
AMDSBA3_105_7
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3516..3938
DNA (423bp) protein (141aa)
3516..3938 + ( gc_cont=0.674)
Transposase family protein {ECO:0000313|EMBL:AGL03703.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae
AMDSBA3_105_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4217..4429
DNA (213bp) protein (71aa)
transposase IS4 family protein
Transposase (Fragment) n=2 Tax=Enterococcus faecium RepID=D0AC64_ENTFC (db=UNIREF evalue=1.2e-21 bit_score=107.5 identity=67.1 coverage=97.1830985915493)
Transposase IS4 family protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IBH4_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEW06541.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Displaying 8 items

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