ggKbase home page

AMDSBA3_114

Alias: AMDSBA3_C113

Search features with annotation key words

Displaying 7 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_114_1
unknown

Not on your lists

1..348
DNA (348bp) protein (116aa)
coiled-coil (db=Coil db_id=coil from=12 to=41 evalue=NA)
seg (db=Seg db_id=seg from=13 to=43)
AMDSBA3_114_2
unknown

Not on your lists

comp(440..619)
DNA (180bp) protein (60aa)
440..619 - ( gc_cont=0.489)
AMDSBA3_114_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(966..1487)
DNA (522bp) protein (174aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUH6_9FIRM (db=UNIREF evalue=3.5e-38 bit_score=163.7 identity=51.5 coverage=93.67816091954023)
seg (db=Seg db_id=seg from=76 to=86)
coiled-coil (db=Coil db_id=coil from=25 to=46 evalue=NA)
AMDSBA3_114_4
unknown

Not on your lists

comp(1594..1815)
DNA (222bp) protein (74aa)
1594..1815 - ( gc_cont=0.428)
AMDSBA3_114_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2088..2483
DNA (396bp) protein (132aa)
hypothetical protein
Predicted protein n=4 Tax=Bifidobacterium bifidum RepID=E4V7M2_BIFBI (db=UNIREF evalue=8.9e-10 bit_score=68.9 identity=34.7 coverage=71.21212121212122)
coiled-coil (db=Coil db_id=coil from=68 to=96 evalue=NA)
seg (db=Seg db_id=seg from=76 to=90)
AMDSBA3_114_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2467..2853
DNA (387bp) protein (129aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03822.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
AMDSBA3_114_7
Salimicrobium jeotgali, Salimicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2887..3135)
DNA (249bp) protein (83aa)
integrase family protein
Site-specific recombinase n=3 Tax=Fusobacterium RepID=C6JK10_FUSVA (db=UNIREF evalue=1.8e-08 bit_score=63.9 identity=39.0 coverage=91.56626506024097)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=1 to=81 evalue=5.2e-19 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=1 to=78 evalue=5.3e-14 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
Displaying 7 items

View Taxonomy