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This organism can only be binned in the context of its binning project CG1_02_SUB10. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

AMDSBA3_118

Alias: AMDSBA3_C117

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Displaying 5 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_118_1
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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219..626
DNA (408bp) protein (136aa)
hypothetical protein
(db=HMMPfam db_id=PF00665 from=24 to=95 evalue=2.5e-05 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Biological Process: DNA integration (GO:0015074))
Uncharacterized protein {ECO:0000313|EMBL:ADP73485.1}; TaxID=581103 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain Y4.1MC1).;"
Uncharacterized protein n=1 Tax=Geobacillus sp. (strain Y4.1MC1) RepID=E3IJ99_GEOS0
AMDSBA3_118_2
Spiroplasma, Entomoplasmatales, Mollicutes, Tenericutes, Bacteria

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677..1051
DNA (375bp) protein (125aa)
type IV secretory pathway VirD4 components-like protein (db=KEGG evalue=4.9e-10 bit_score=69.3 identity=40.9 coverage=85.6)
MOB-like protein n=7 Tax=Spiroplasma RepID=Q3ZVL9_SPICI (db=UNIREF evalue=7.1e-09 bit_score=65.9 identity=31.1 coverage=96.0)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=111 evalue=4.1e-11)
AMDSBA3_118_3
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

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1101..1454
DNA (354bp) protein (118aa)
transcriptional regulator
Transcriptional regulator, XRE family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y559_NITMU (db=UNIREF evalue=4.8e-15 bit_score=86.3 identity=49.5 coverage=82.20338983050848)
coiled-coil (db=Coil db_id=coil from=8 to=29 evalue=NA)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=74 evalue=5.0e-11 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
AMDSBA3_118_4
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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1464..2138
DNA (675bp) protein (225aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=A8LN13_DINSH (db=UNIREF evalue=1.1e-36 bit_score=159.1 identity=42.9 coverage=96.88888888888889)
(db=HMMPfam db_id=PF06114 from=94 to=210 evalue=7.5e-10 interpro_id=IPR010359 interpro_description=Protein of unknown function DUF955)
hypothetical protein Tax=GWA1_Bdellovibrionales_52_35_curated
AMDSBA3_118_5
unknown

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2348..2644
DNA (297bp) protein (99aa)
2348..2644 + ( gc_cont=0.542)
Displaying 5 items

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