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AMDSBA3_7_6

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 4065..4262

Top 3 Functional Annotations

Value Algorithm Source
(db=HMMPfam db_id=PF00376 from=7 to=44 evalue=2.0e-12 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.00e-12
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=5 to=49 evalue=3.7e-09 interpro_id=IPR009061 interpro_description=DNA binding domain, putative GO=Molecular Function: nucleotide binding (GO:0000166)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.70e-09
no description (db=Gene3D db_id=G3DSA:1.10.1660.10 from=6 to=49 evalue=0.00038) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.80e-04

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Taxonomy

Methylacidiphilum infernorum → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 198
ATGGATCGTAAATTGGTGAGTATTCATGAAGCGGCGCAATTTTTGGGCGTCACTCCGACGACCTTGCGGCGATGGGAGCGAGAGGGACGGCTCTTACCGGATGCACGGACTCGCGGCGGGGATTGGCGCTATGATTTGCATCGCTTGGGATCCGCGTCTCAAGGCTCGGACCATCCCGACCGCCAAACCGTGGCCTAA
PROTEIN sequence
Length: 66
MDRKLVSIHEAAQFLGVTPTTLRRWEREGRLLPDARTRGGDWRYDLHRLGSASQGSDHPDRQTVA*