| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
|
AMDSBA3_7_1
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(619..1320)
|
hypothetical protein
hypothetical protein SspiN1_22470 n=1 Tax=Saccharopolyspora spinosa NRRL 18395 RepID=UPI0002378946 (db=UNIREF evalue=1.0e-24 bit_score=119.4 identity=36.5 coverage=89.31623931623932)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=3 to=229 evalue=1.9e-36)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=2 to=229 evalue=4.1e-27)
|
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AMDSBA3_7_2
unknown
|
Not on your lists |
comp(1373..1612)
|
1373..1612 - ( gc_cont=0.608)
|
|
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AMDSBA3_7_3
unknown
|
Not on your lists |
comp(1835..1972)
|
MEDIUM-CHAIN FATTY ACID--COA LIGASE (db=HMMPanther db_id=PTHR11968:SF27 from=3 to=36 evalue=0.00033)
ATP-DEPENDENT AMP-BINDING ENZYME FAMILY MEMBER (db=HMMPanther db_id=PTHR11968 from=3 to=36 evalue=0.00033)
|
|
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AMDSBA3_7_4
unknown
|
Not on your lists |
comp(1982..2329)
|
seg (db=Seg db_id=seg from=51 to=62)
seg (db=Seg db_id=seg from=17 to=32)
ATP-DEPENDENT AMP-BINDING ENZYME FAMILY MEMBER (db=HMMPanther db_id=PTHR11968 from=86 to=114 evalue=7.3e-07)
MEDIUM-CHAIN FATTY ACID--COA LIGASE (db=HMMPanther db_id=PTHR11968:SF27 from=86 to=114 evalue=7.3e-07)
|
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AMDSBA3_7_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(2374..3555)
|
collagen like triple helix protein
seg (db=Seg db_id=seg from=252 to=259)
seg (db=Seg db_id=seg from=11 to=32)
seg (db=Seg db_id=seg from=343 to=379)
|
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|
AMDSBA3_7_6
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria
|
Not on your lists |
4065..4262
|
(db=HMMPfam db_id=PF00376 from=7 to=44 evalue=2.0e-12 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=5 to=49 evalue=3.7e-09 interpro_id=IPR009061 interpro_description=DNA binding domain, putative GO=Molecular Function: nucleotide binding (GO:0000166))
no description (db=Gene3D db_id=G3DSA:1.10.1660.10 from=6 to=49 evalue=0.00038)
transposon IS605 OrfA, integrase-resolvase
|
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AMDSBA3_7_7
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4380..4694
|
resolvase-like protein
Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JNG9_9BACE (db=UNIREF evalue=3.4e-28 bit_score=129.8 identity=68.6 coverage=95.23809523809523)
(db=HMMPfam db_id=PF00239 from=4 to=89 evalue=1.1e-06 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
Resolvase-like (db=superfamily db_id=SSF53041 from=1 to=97 evalue=1.4e-06 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
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AMDSBA3_7_8
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4691..4891
|
(db=HMMPfam db_id=PF12323 from=1 to=33 evalue=5.5e-09 interpro_id=IPR021027 interpro_description=Transposase, putative, helix-turn-helix domain)
Transposase OrfB {ECO:0000313|EMBL:EHP40175.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR
Transposase OrfB n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SBA4_9BURK
|
|
| AMDSBA3_7_9 |
Not on your lists |
4843..5082
|
Transposase, IS605 OrfB family
Transposase, IS605 OrfB family n=2 Tax=Sphaerochaeta coccoides DSM 17374 RepID=F4GH90_SPICD (db=UNIREF evalue=3.4e-12 bit_score=76.3 identity=66.1 coverage=62.5)
Transposase OrfB {ECO:0000313|EMBL:AGF87280.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Transposase OrfB n=1 Tax=uncultured organism RepID=M1PRJ0_9ZZZZ
|
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AMDSBA3_7_10
unknown
|
Not on your lists |
5372..5911
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
|
|
|
AMDSBA3_7_11
R_OP11_Roizmanbacteria_43_10, Roizmannbacteria, Microgenomates, Bacteria
|
Not on your lists |
comp(6021..6386)
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQM9_9GAMM (db=UNIREF evalue=9.1e-17 bit_score=92.0 identity=46.2 coverage=81.9672131147541)
(db=HMMPfam db_id=PF01934 from=13 to=104 evalue=9.1e-21 interpro_id=IPR008201 interpro_description=Protein of unknown function DUF86)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OP11_Roizmanbacteria_43_10_curated
|
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AMDSBA3_7_12
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
|
Not on your lists |
comp(6373..6702)
|
DNA polymerase beta domain-containing protein
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=5 to=105 evalue=1.3e-15)
(db=HMMPfam db_id=PF01909 from=21 to=104 evalue=4.6e-10 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
DNA polymerase beta domain protein region n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LZW0_ACIFD
|
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|
AMDSBA3_7_13
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7019..7552
|
Transposase, IS605 OrfB family
Transposase n=1 Tax=Beggiatoa sp. PS RepID=A7BXB2_9GAMM (db=UNIREF evalue=8.5e-24 bit_score=115.9 identity=44.0 coverage=80.89887640449437)
coiled-coil (db=Coil db_id=coil from=81 to=102 evalue=NA)
coiled-coil (db=Coil db_id=coil from=122 to=143 evalue=NA)
|
|
|
AMDSBA3_7_14
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7754..8806
|
family 2 glycosyl transferase
Glycosyl transferase family protein n=1 Tax=Actinobacillus minor NM305 RepID=C5S2Y5_9PAST (db=UNIREF evalue=3.7e-55 bit_score=221.1 identity=38.4 coverage=93.16239316239316)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=158 evalue=1.3e-17)
|
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AMDSBA3_7_15
unknown
|
Not on your lists |
comp(9030..9281)
|
9030..9281 - ( gc_cont=0.595)
|
|
|
AMDSBA3_7_16
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria
|
Not on your lists |
9628..11244
|
NADH ubiquinone oxidoreductase subunit L
NADH dehydrogenase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NXP4_9RHOB (db=UNIREF evalue=2.9e-67 bit_score=261.9 identity=34.8 coverage=95.54730983302412)
transmembrane_regions (db=TMHMM db_id=tmhmm from=425 to=447)
seg (db=Seg db_id=seg from=516 to=530)
|
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|
AMDSBA3_7_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11241..13769
|
hypothetical protein
hypothetical protein
UPF0753 protein Lferr_1358 n=4 Tax=root RepID=Y1358_ACIF5 (db=UNIREF evalue=3.5e-277 bit_score=959.9 identity=57.5 coverage=95.37366548042705)
|
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AMDSBA3_7_18
unknown
|
Not on your lists |
comp(14464..14595)
|
14464..14595 - ( gc_cont=0.568)
|
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AMDSBA3_7_19
Bacillus coagulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(14614..15777)
|
acyl-CoA dehydrogenase
Acd8 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEQ0_DESAH (db=UNIREF evalue=1.5e-44 bit_score=186.0 identity=31.2 coverage=97.9381443298969)
ACYL_COA_DH_2 (db=PatternScan db_id=PS00073 from=336 to=355 evalue=0.0 interpro_id=IPR006089 interpro_description=Acyl-CoA dehydrogenase, conserved site GO=Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995), Biological Process: oxidation-reduction process (GO:0055114))
ACYL-COA DEHYDROGENASE (db=HMMPanther db_id=PTHR10909:SF10 from=101 to=378 evalue=1.8e-153)
|
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AMDSBA3_7_20
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria
|
Not on your lists |
comp(15921..16961)
|
||
|
AMDSBA3_7_21
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria
|
Not on your lists |
comp(16933..17544)
|
DNA invertase
Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQ08_9DELT (db=UNIREF evalue=2.7e-29 bit_score=134.4 identity=36.4 coverage=97.54901960784314)
no description (db=HMMSmart db_id=SM00857 from=61 to=195 evalue=4.2e-23 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
Resolvase-like (db=superfamily db_id=SSF53041 from=59 to=198 evalue=6.6e-21 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
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AMDSBA3_7_22
Geobacillus thermodenitrificans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(18511..20130)
|
long-chain fatty acid CoA ligase (AMP-binding)
rbh
AMP-dependent synthetase and ligase n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YGJ3_9ACTO (db=UNIREF evalue=3.2e-82 bit_score=311.6 identity=37.6 coverage=90.55555555555556)
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=251)
transmembrane_regions (db=TMHMM db_id=tmhmm from=87 to=109)
|
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AMDSBA3_7_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(20950..21531)
|
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVL0_9FIRM (db=UNIREF evalue=2.4e-43 bit_score=181.0 identity=52.7 coverage=90.20618556701031)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=178)
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AMDSBA3_7_24
Pontibacillus halophilus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(22300..23070)
|
gluconate 2-dehydrogenase (EC:1.1.1.69)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGJ2_9EURY (db=UNIREF evalue=2.6e-42 bit_score=177.9 identity=39.6 coverage=96.49805447470817)
seg (db=Seg db_id=seg from=18 to=41)
seg (db=Seg db_id=seg from=52 to=66)
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AMDSBA3_7_25
unknown
|
Not on your lists |
comp(23561..23854)
|
23561..23854 - ( gc_cont=0.643)
|
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AMDSBA3_7_26
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(24327..24752)
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Uncharacterized protein possibly involved in aromatic compounds catabolism
Thioesterase family protein n=1 Tax=Corallococcus coralloides DSM 2259 RepID=H8MWT6_CORCM (db=UNIREF evalue=1.4e-08 bit_score=65.1 identity=36.4 coverage=80.98591549295774)
seg (db=Seg db_id=seg from=39 to=50)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=1 to=131 evalue=3.3e-22)
|
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AMDSBA3_7_27
Pontibacillus yanchengensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(24818..25447)
|
transcriptional regulator
TetR family transcriptional regulator n=1 Tax=Thermus sp. RL RepID=H7GFL5_9DEIN (db=UNIREF evalue=6.3e-18 bit_score=96.7 identity=33.3 coverage=87.14285714285714)
seg (db=Seg db_id=seg from=12 to=28)
Homeodomain-like (db=superfamily db_id=SSF46689 from=7 to=95 evalue=1.2e-18 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515))
|
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AMDSBA3_7_28
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(25596..27110)
|
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Dicarboxylate-CoA ligase PimA n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I3G9_9ACTO (db=UNIREF evalue=3.4e-78 bit_score=298.1 identity=35.6 coverage=96.83168316831683)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=83)
coiled-coil (db=Coil db_id=coil from=29 to=50 evalue=NA)
|
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AMDSBA3_7_29
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27168..28700)
|
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase n=11 Tax=Sulfolobus RepID=C3MKV6_SULIL (db=UNIREF evalue=3.9e-45 bit_score=188.3 identity=29.6 coverage=99.60861056751467)
transmembrane_regions (db=TMHMM db_id=tmhmm from=216 to=238)
seg (db=Seg db_id=seg from=340 to=353)
|
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AMDSBA3_7_30
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28722..29885)
|
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGH0_9CHLR (db=UNIREF evalue=1.4e-79 bit_score=302.4 identity=42.0 coverage=97.16494845360825)
seg (db=Seg db_id=seg from=77 to=92)
|
