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AMDSBA3_10_4

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 1732..2343

Top 3 Functional Annotations

Value Algorithm Source
HTH_TETR_1 (db=PatternScan db_id=PS01081 from=34 to=65 evalue=0.0 interpro_id=IPR023772 interpro_description=DNA-binding HTH domain, TetR-type, conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Homeodomain-like (db=superfamily db_id=SSF46689 from=6 to=94 evalue=2.7e-18 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.70e-18
(db=HMMPfam db_id=PF00440 from=25 to=68 evalue=1.6e-16 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-16

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Taxonomy

Burkholderia lata → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
GTGACCATAGAAAAAGGAACTTGGCCTGTTGCACCTGATTTAAAAGACACGCGTCGGGAAGCGATACGTAATGAGGCAGCCCGCTTGTTTGCAATACACGGGTATCGTTCTACCACACTTGACGACATTGCTACCAGTCTTAACGTGACTAAAGGTGCAATATACTACTACTTTAAGTCCAAAGATGAGATTCTTCACGCCATCGTTTTGGTAGCGATGGAAGCCATGGAAAGCAACTTTAATTCTGCAGTCGCTTTACAAAAAGATGTTGTTTCCACGCTTTACGATATCTTGTATGGACATGTATTGGCCGTTCTAGCGAATCGTAACAGTCTGGGAGTATACCTGCGCGAGCGAACAGAAATGAACGAGGCAGACCGGGCACCGATTGACAGCCGGATGCGCGCATATATGAATTCTGTTGCGGGTCTGGTCTCTGAGCTTCCAAATGCTAACCATCTCGTAGTCGATCCTCAAATTGTTGTCCTATCATGGTTTGCTTCATGCAACAGCGTAATCCAGTGGTATCGCCCGGAGGGATTGTTGCCTTCGGAGACTATCGCGGATATTTTGGCTGGGATGGCAATTCGATCCATTGGTTTTAACCCGTAG
PROTEIN sequence
Length: 204
VTIEKGTWPVAPDLKDTRREAIRNEAARLFAIHGYRSTTLDDIATSLNVTKGAIYYYFKSKDEILHAIVLVAMEAMESNFNSAVALQKDVVSTLYDILYGHVLAVLANRNSLGVYLRERTEMNEADRAPIDSRMRAYMNSVAGLVSELPNANHLVVDPQIVVLSWFASCNSVIQWYRPEGLLPSETIADILAGMAIRSIGFNP*