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AMDSBA3_10

Alias: AMDSBA3_C9

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Displaying items 1-30 of 69 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_10_1
GWB1_OP11_49_7, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(2..178)
DNA (177bp) protein (59aa)
transposase, OrfB family
Transposase, OrfB family, putative n=2 Tax=Methanosaeta concilii GP6 RepID=F4BSX7_METCG (db=UNIREF evalue=3.0e-10 bit_score=69.3 identity=62.5 coverage=79.66101694915254)
Transposase, OrfB family, putative Tax=GWB1_OP11_49_7
AMDSBA3_10_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(165..398)
DNA (234bp) protein (78aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVS4_9FIRM (db=UNIREF evalue=6.4e-32 bit_score=141.7 identity=72.7 coverage=97.43589743589743)
Uncharacterized protein {ECO:0000313|EMBL:AEJ40767.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I3F9_SULAT
AMDSBA3_10_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(395..1483)
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I3G0_SULAT (db=UNIREF evalue=5.0e-79 bit_score=300.4 identity=41.2 coverage=97.7961432506887)
hypothetical protein
hypothetical protein
AMDSBA3_10_4
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1732..2343
DNA (612bp) protein (204aa)
HTH_TETR_1 (db=PatternScan db_id=PS01081 from=34 to=65 evalue=0.0 interpro_id=IPR023772 interpro_description=DNA-binding HTH domain, TetR-type, conserved site)
Homeodomain-like (db=superfamily db_id=SSF46689 from=6 to=94 evalue=2.7e-18 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515))
(db=HMMPfam db_id=PF00440 from=25 to=68 evalue=1.6e-16 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.10.60 from=13 to=68 evalue=3.1e-13 interpro_id=IPR012287 interpro_description=Homeodomain-related GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA3_10_5
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

2808..4022
DNA (1215bp) protein (405aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
Coenzyme F390 synthetase n=3 Tax=Methanobrevibacter smithii RepID=A5UNZ1_METS3 (db=UNIREF evalue=4.0e-45 bit_score=188.0 identity=30.7 coverage=93.58024691358024)
seg (db=Seg db_id=seg from=132 to=149)
Acetyl-CoA synthetase-like (db=superfamily db_id=SSF56801 from=102 to=376 evalue=1.8e-30)
AMDSBA3_10_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4024..5169
DNA (1146bp) protein (382aa)
acyl-coa dehydrogenase
Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Colletotrichum higginsianum RepID=H1W4M9_9PEZI (db=UNIREF evalue=5.0e-21 bit_score=107.8 identity=29.7 coverage=72.77486910994764)
seg (db=Seg db_id=seg from=251 to=263)
seg (db=Seg db_id=seg from=219 to=236)
AMDSBA3_10_7
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5202..5630
DNA (429bp) protein (143aa)
(db=HMMPfam db_id=PF01796 from=65 to=120 evalue=5.9e-09 interpro_id=IPR002878 interpro_description=Domain of unknown function DUF35, OB-fold, C-terminal)
nucleic-acid-binding protein containing a Zn-ribbon
Putative nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:AET68510.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;"
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WGS4_DESOD
AMDSBA3_10_8
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5649..6758
DNA (1110bp) protein (370aa)
acetyl-CoA acetyltransferase rbh
Thiolase n=1 Tax=Blastococcus saxobsidens DD2 RepID=H6RNM4_BLASD (db=UNIREF evalue=3.2e-73 bit_score=281.2 identity=41.4 coverage=99.45945945945947)
seg (db=Seg db_id=seg from=26 to=34)
seg (db=Seg db_id=seg from=280 to=291)
AMDSBA3_10_9
unknown

Not on your lists

6820..7806
DNA (987bp) protein (329aa)
seg (db=Seg db_id=seg from=8 to=19)
AMDSBA3_10_10
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7806..9155
DNA (1350bp) protein (450aa)
paaK2; Coenzyme F390 synthetase
Phenylacetate--CoA ligase n=1 Tax=Gordonia alkanivorans NBRC 16433 RepID=F9VWS5_9ACTO (db=UNIREF evalue=5.3e-30 bit_score=137.9 identity=31.0 coverage=80.88888888888889)
seg (db=Seg db_id=seg from=99 to=115)
Acetyl-CoA synthetase-like (db=superfamily db_id=SSF56801 from=69 to=447 evalue=2.5e-23)
AMDSBA3_10_11

Not on your lists

9191..9973
DNA (783bp) protein (261aa)
short chain dehydrogenase
oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE794 (db=UNIREF evalue=1.6e-39 bit_score=168.7 identity=37.8 coverage=94.6360153256705)
seg (db=Seg db_id=seg from=37 to=50)
ADH_SHORT (db=PatternScan db_id=PS00061 from=151 to=179 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
AMDSBA3_10_12
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

10009..10794
DNA (786bp) protein (262aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.55)
Methylglutaconyl-CoA hydratase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIV7_9PROT (db=UNIREF evalue=6.0e-18 bit_score=97.1 identity=30.6 coverage=99.23664122137404)
seg (db=Seg db_id=seg from=99 to=119)
ENOYL_COA_HYDRATASE (db=PatternScan db_id=PS00166 from=101 to=121 evalue=0.0 interpro_id=IPR018376 interpro_description=Enoyl-CoA hydratase/isomerase, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBA3_10_13
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11240..12403)
DNA (1164bp) protein (388aa)
cbiB; acyl-CoA transferase
Alpha-methylacyl-CoA racemase (Fragment) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHB5_9FIRM (db=UNIREF evalue=2.6e-89 bit_score=334.7 identity=44.8 coverage=95.10309278350515)
CoA-transferase family III (CaiB/BaiF) (db=superfamily db_id=SSF89796 from=1 to=386 evalue=6.2e-119 interpro_id=IPR023606 interpro_description=CoA-transferase family III domain)
AMDSBA3_10_14
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12421..12828)
DNA (408bp) protein (136aa)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=4 to=130 evalue=5.1e-30)
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=11 to=135 evalue=7.8e-26)
unchar_dom_1: uncharacterized domain (db=HMMTigr db_id=TIGR00369 from=13 to=130 evalue=9.5e-18 interpro_id=IPR003736 interpro_description=Phenylacetic acid degradation-related protein)
(db=HMMPfam db_id=PF03061 from=44 to=121 evalue=3.8e-11 interpro_id=IPR006683 interpro_description=Thioesterase superfamily)
AMDSBA3_10_15
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12830..13528)
DNA (699bp) protein (233aa)
coiled-coil (db=Coil db_id=coil from=137 to=158 evalue=NA)
HTH_TETR_1 (db=PatternScan db_id=PS01081 from=45 to=76 evalue=0.0 interpro_id=IPR023772 interpro_description=DNA-binding HTH domain, TetR-type, conserved site)
Tetracyclin repressor-like, C-terminal domain (db=superfamily db_id=SSF48498 from=100 to=213 evalue=7.2e-18 interpro_id=IPR011075 interpro_description=Tetracycline transcriptional regulator, TetR-related, C-terminal)
Homeodomain-like (db=superfamily db_id=SSF46689 from=17 to=105 evalue=9.6e-18 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515))
AMDSBA3_10_16
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13482..14279)
DNA (798bp) protein (266aa)
enoyl-CoA hydratase/isomerase family protein
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y765_9BURK (db=UNIREF evalue=4.5e-21 bit_score=107.5 identity=31.2 coverage=95.86466165413535)
seg (db=Seg db_id=seg from=36 to=47)
ClpP/crotonase (db=superfamily db_id=SSF52096 from=1 to=261 evalue=2.1e-75)
AMDSBA3_10_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14292..14756)
DNA (465bp) protein (155aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=O30036_ARCFU (db=UNIREF evalue=4.4e-24 bit_score=116.7 identity=41.1 coverage=92.25806451612904)
(db=HMMPfam db_id=PF01796 from=67 to=137 evalue=5.1e-08 interpro_id=IPR002878 interpro_description=Domain of unknown function DUF35, OB-fold, C-terminal)
hypothetical protein; K07068 Tax=GWA2_Rokubacteria_70_23_curated
AMDSBA3_10_18
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14778..15971)
DNA (1194bp) protein (398aa)
SCP-x_thiolase/acetyl-CoA acetyltransferase, PaaJ-like (EC:2.3.1.16)
Propanoyl-CoA C-acyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I5K2_9FIRM (db=UNIREF evalue=7.0e-42 bit_score=177.2 identity=30.3 coverage=95.47738693467338)
seg (db=Seg db_id=seg from=87 to=99)
Thiolase-like (db=superfamily db_id=SSF53901 from=7 to=233 evalue=6.4e-33 interpro_id=IPR016039 interpro_description=Thiolase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBA3_10_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15972..17057)
DNA (1086bp) protein (362aa)
acetyl-CoA acetyltransferase, PaaJ-like (EC:2.3.1.16)
Uncharacterized protein n=2 Tax=Rhodococcus RepID=I0WKS7_9NOCA (db=UNIREF evalue=8.6e-15 bit_score=87.0 identity=27.4 coverage=96.13259668508287)
Thiolase-like (db=superfamily db_id=SSF53901 from=4 to=213 evalue=1.1e-11 interpro_id=IPR016039 interpro_description=Thiolase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Thiolase-like (db=superfamily db_id=SSF53901 from=214 to=351 evalue=2.0e-11 interpro_id=IPR016039 interpro_description=Thiolase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBA3_10_20
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17075..18208)
DNA (1134bp) protein (378aa)
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein n=1 Tax=Frankia sp. EAN1pec RepID=A8LD74_FRASN (db=UNIREF evalue=3.6e-48 bit_score=198.0 identity=30.9 coverage=98.67724867724867)
ACYL_COA_DH_2 (db=PatternScan db_id=PS00073 from=334 to=353 evalue=0.0 interpro_id=IPR006089 interpro_description=Acyl-CoA dehydrogenase, conserved site GO=Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995), Biological Process: oxidation-reduction process (GO:0055114))
ACYL-COA DEHYDROGENASE (db=HMMPanther db_id=PTHR10909:SF10 from=75 to=372 evalue=9.7e-161)
AMDSBA3_10_21
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18245..19747)
DNA (1503bp) protein (501aa)
acsL3; protein AcsL3 (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZY5_ACIFD (db=UNIREF evalue=9.7e-57 bit_score=226.9 identity=32.5 coverage=94.61077844311377)
Acetyl-CoA synthetase-like (db=superfamily db_id=SSF56801 from=5 to=491 evalue=8.6e-114)
LONG-CHAIN-FATTY-ACID--COA LIGASE (db=HMMPanther db_id=PTHR11968:SF44 from=1 to=474 evalue=1.9e-82)
AMDSBA3_10_22
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19764..21083)
DNA (1320bp) protein (440aa)
paaK-1; phenylacetate-CoA ligase (EC:6.2.1.30)
Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NR90_BACSE (db=UNIREF evalue=8.0e-39 bit_score=167.2 identity=30.0 coverage=96.13636363636363)
Acetyl-CoA synthetase-like (db=superfamily db_id=SSF56801 from=15 to=439 evalue=1.7e-23)
(db=HMMPfam db_id=PF00501 from=91 to=362 evalue=0.00015 interpro_id=IPR000873 interpro_description=AMP-dependent synthetase/ligase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBA3_10_23
Staphylococcus xylosus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21140..21565)
DNA (426bp) protein (142aa)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=3 to=140 evalue=5.0e-24)
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=1 to=141 evalue=1.2e-20)
(db=HMMPfam db_id=PF01575 from=7 to=104 evalue=5.0e-17 interpro_id=IPR002539 interpro_description=MaoC-like dehydratase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
hypothetical protein
AMDSBA3_10_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22520..23296)
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase/isomerase rbh
Putative enoyl-CoA hydratase/isomerase yngF n=9 Tax=Bacillus RepID=YNGF_BACSU (db=UNIREF evalue=3.1e-30 bit_score=137.9 identity=35.7 coverage=91.11969111969111)
seg (db=Seg db_id=seg from=106 to=123)
seg (db=Seg db_id=seg from=86 to=97)
AMDSBA3_10_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23289..24233)
DNA (945bp) protein (315aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SWQ4_PHYPA (db=UNIREF evalue=8.2e-54 bit_score=216.5 identity=40.5 coverage=91.11111111111111)
Aldolase (db=superfamily db_id=SSF51569 from=7 to=302 evalue=1.2e-72)
HYDROXYMETHYLGLUTARYL-COA LYASE (db=HMMPanther db_id=PTHR10277:SF1 from=119 to=303 evalue=2.2e-61)
AMDSBA3_10_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24247..25764)
DNA (1518bp) protein (506aa)
pccB; propionyl-CoA carboxylase rbh
pccB; propionyl-CoA carboxylase rbh
Uncharacterized carboxylase YngE n=11 Tax=Bacillus RepID=YNGE_BACSU (db=UNIREF evalue=1.0e-186 bit_score=658.7 identity=66.5 coverage=99.2094861660079)
AMDSBA3_10_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25787..25999)
DNA (213bp) protein (71aa)
oadA; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
(db=HMMPfam db_id=PF00364 from=9 to=69 evalue=5.7e-19 interpro_id=IPR000089 interpro_description=Biotin/lipoyl attachment)
Single hybrid motif (db=superfamily db_id=SSF51230 from=1 to=70 evalue=3.4e-18 interpro_id=IPR011053 interpro_description=Single hybrid motif)
no description (db=Gene3D db_id=G3DSA:2.40.50.100 from=2 to=70 evalue=1.2e-16)
AMDSBA3_10_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26015..26650)
DNA (636bp) protein (212aa)
hypothetical protein (db=KEGG evalue=1.7e-15 bit_score=88.2 identity=29.9 coverage=88.67924528301887)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVC1_9FIRM (db=UNIREF evalue=2.3e-15 bit_score=88.2 identity=29.9 coverage=88.67924528301887)
seg (db=Seg db_id=seg from=91 to=102)
AMDSBA3_10_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26647..27792)
DNA (1146bp) protein (382aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1) rbh
butyryl-CoA dehydrogenase (EC:1.3.8.1) rbh
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Thermaerobacter RepID=E6SK20_THEM7 (db=UNIREF evalue=5.9e-123 bit_score=446.4 identity=59.8 coverage=98.1675392670157)
AMDSBA3_10_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27957..28802
DNA (846bp) protein (282aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TVB9_9FIRM (db=UNIREF evalue=3.0e-116 bit_score=423.7 identity=73.5 coverage=98.22695035460993)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
Displaying items 1-30 of 69 in total

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