ggKbase home page

AMDSBA3_10_11

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 9191..9973

Top 3 Functional Annotations

Value Algorithm Source
short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 257.0
  • Bit_score: 241
  • Evalue 3.10e-61
oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE794 (db=UNIREF evalue=1.6e-39 bit_score=168.7 identity=37.8 coverage=94.6360153256705) similarity UNIREF
DB: UNIREF
  • Identity: 37.8
  • Coverage: 94.64
  • Bit_score: 168
  • Evalue 1.60e-39
seg (db=Seg db_id=seg from=37 to=50) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 783
ATGGATGAACGAGTTGCATTAGTGACAGGAGCAGGGCAGGGAGTCGGTCGAGCGATAGCTCTCGCCCTGGCCCGGCAGGGAGCCAAAATAGTTATTGTGAACGATTACGTGGAGGAACGCGCTCGTCGCGTCGCCGAGGAAGTTGCTGCTATGGACATTGGAGTCCAAGGTGTTCCCTATCAAGCCAATGTCAGCCTGTGGACAGATGTCACTCGAATGATCGACGACGTGGGGAGTAAGTTTGGTTCGGTCGATGTCCTGGTGAACAATGCAGGCAATGCAGGACAGACCGTGGAGGACGTTATCGGCTGGAGCCGAGAGTTTGTCGAGACGGACCCCGACCATTGGAGAGCATGGGTGGATGTGAACTTCCTGGCACCCATGTACATGACGAGGGCAGTCTTGCCACACATGATTCGTCATGAGTGGGGGCGTATTATTAATGTGATTTCTGAAGCAGGACGAGTTGGCGAACCCCGTTTAGTAGTCTACTCGGGAGCTAAGGCGGGCACGGCAGGGTTCTCCCGGGCATTAGCGAAAGAAGTGGGTCGTTATCGCATTACGGTTAACTGCGTAGCCCTTGGAACGATCGACACGCCAAGCGTCTCATCGGTGGTGGGAGATGCAACGCTATTAAAAAAGATGTCTGCACGTTATCCTCTTAAACGAATTGGACAGCCCGAGGACGTCAGTGGGTTGGTGGCCTTCCTAGCATCCGATAACGCATCGTGGATTACCGGGCAGACTTATGGTGTGAATGGCGGGTATGCAACCTTGCCATAA
PROTEIN sequence
Length: 261
MDERVALVTGAGQGVGRAIALALARQGAKIVIVNDYVEERARRVAEEVAAMDIGVQGVPYQANVSLWTDVTRMIDDVGSKFGSVDVLVNNAGNAGQTVEDVIGWSREFVETDPDHWRAWVDVNFLAPMYMTRAVLPHMIRHEWGRIINVISEAGRVGEPRLVVYSGAKAGTAGFSRALAKEVGRYRITVNCVALGTIDTPSVSSVVGDATLLKKMSARYPLKRIGQPEDVSGLVAFLASDNASWITGQTYGVNGGYATLP*