ggKbase home page

AMDSBA3_13_6

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 5385..5789

Top 3 Functional Annotations

Value Algorithm Source
(db=HMMPfam db_id=PF02899 from=67 to=133 evalue=3.8e-07 interpro_id=IPR004107 interpro_description=Integrase, SAM-like, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.80e-07
Integrase {ECO:0000313|EMBL:KGP76758.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;" UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 80.0
  • Bit_score: 113
  • Evalue 3.30e-22
integrase family protein KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 81.0
  • Bit_score: 104
  • Evalue 3.10e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfosporosinus sp. Tol-M → Desulfosporosinus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 405
ATGCCCTGCCGTATCTCTCCGCCTATTTGGGTCATACGGATTTTCGGGGCACGGAGTATTACCTCCGCCTTACGGCCGAGGTGTATCCGGATCTCGTCGTACAGTGGGAGGCCGCGTTGGGATCCATCATTCCCCAAGGAGGGTATTCCCCTGAAGACACCGACTGACTTTGCTCGGCACCTGTCCACGTTTCTCACGCAATATCTTCCGGGACAAAAGAATGTGAGTCCCCATACCATTGCCGCTTATCGCGATACATGGAAACTGTTTCTGATCTTTAGCGAACAATATGACGGGGTAGGGCCGGAGCGATTGACCCTCGCCAAGCTGACCAAAGATCGCGTCCTGGCCTATTTGGAGTGGCTCGAAACGGTGCGCCATTGCTCGGCGGCGACGCGCAATTAG
PROTEIN sequence
Length: 135
MPCRISPPIWVIRIFGARSITSALRPRCIRISSYSGRPRWDPSFPKEGIPLKTPTDFARHLSTFLTQYLPGQKNVSPHTIAAYRDTWKLFLIFSEQYDGVGPERLTLAKLTKDRVLAYLEWLETVRHCSAATRN*