ggKbase home page

AMDSBA3_24_14

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(10185..10577)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=51) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
seg (db=Seg db_id=seg from=35 to=56) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=32 to=123 evalue=8.6e-09 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.60e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus gastricus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 393
ATGGTTCAGCGTGGGAACGCGACGGTAGTGCCTGCGGTCAATATGGCTCATTCGGAAGCCATATGGCGTGATCTCGATCACAGAAATCCACAGGGATCCAGCGCCGTAGCGGCTGCTTTTATGGTTGCGGCCCTTCTCCTATGGCCACTTCCAAGGTCTCTGCGCCCGCAGGATATTTTCAAGGCCGCTCCCTTGGCTCACTTTTCCGCGCAACTATGGGGATTCTTGGAGGACGTCGCCGTTAGTGTTTTTGGAGGCCTTCTGCATTACCAGCGCGTCGACCCTGAGTGGCTGTACCAGGCGTTGTCGAGTCATCCGTTGCCTGAACTGATTGGCCCTTCTTGGCCTGGTCTCGAAGTCCAGACTCTTGACGCGCGGTGGGCTCCACGATGA
PROTEIN sequence
Length: 131
MVQRGNATVVPAVNMAHSEAIWRDLDHRNPQGSSAVAAAFMVAALLLWPLPRSLRPQDIFKAAPLAHFSAQLWGFLEDVAVSVFGGLLHYQRVDPEWLYQALSSHPLPELIGPSWPGLEVQTLDARWAPR*