ggKbase home page

AMDSBA3_25_35

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(28277..29485)

Top 3 Functional Annotations

Value Algorithm Source
integral membrane protein-like protein similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 370.0
  • Bit_score: 199
  • Evalue 2.10e-48
Putative integral membrane protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XRJ6_9PSEU (db=UNIREF evalue=2.4e-21 bit_score=109.0 identity=25.7 coverage=79.90074441687345) similarity UNIREF
DB: UNIREF
  • Identity: 25.7
  • Coverage: 79.9
  • Bit_score: 109
  • Evalue 2.40e-21
transmembrane_regions (db=TMHMM db_id=tmhmm from=204 to=226) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1209
ATGCAGAAAACGGTGACGCAGCCTTTGTGGAAACGAGCCTTGGCACTAGTCTCGATAACAGTATGGATGGTTTGGGGTTACATCCGCCTAATGCCTCCACCGAGCCTTATTCGCCACGGCCAGTTGGTGGTATCCGGCTATGATCTCTGGTCGTTTAAAAACCTGGCCTATTCCGACATCGTGAAATTATATGAGACCCGCTATCTATTTTTGCACTTGATTCCATACATTCAAAACCGCATCGAATATCCGGTCATTACGGGCATTTTCATGTCTTTAGCCGCAGTCGGCCACGGCATCAAGAGTTATTTTTTGGTCACTTTCATCATTTTTTGGCTCATCGCCATTTTGGTCTACTTCCTCATGGAACGGCTAGTGCCAGAGCAAGCAATCTTCTTTGCCGTGCTCCCCCTGTTAATGGTCTACGGCCTTTTAAATTGGGACGTTCTGGGTATTGGATTTATGGTCGTCGCCTGGTACCTGTACCAACGCCAACAGTACACTTGGAGTGCAATTATCTTTTGCTTCGGAGTATTTGCCAAACTCTTTCCGGTCTTCTTTCTTCCCTTCATCATCGCTGAACTGGTGCGCAAGCGCCAGTTACAGACACTTTGGCGCATGATTGGAGCATTTTTCGCCACCGCCCTCATCATCAATGTCCCATTTGCCGTCGGCAACTTCAAGAACTGGTCCTACTTCTTTACGTACAACGCGGGGCGCGGCTTAGGCGCAGATATTTACGCAAACGAGTGGATTCATGGGATCACCACGGCCCAAGCCAATATGTTTTCCTTAATAGTCGTCGTGCTGACCGTGCTGTATTTGATGTGGCAAGTGTATCGCGGTGCTCGCATTATTGATGCGACCGCACTTTCGTTTACGGTGTTCCTATTTGTCAACAAAGTCTACTCGCCTCAGTATACCTTGTGGGTTTTCGTCCTCGCCATTTTGGCGCAGTGGCCGATTTGGACATATGTAGTTCTCACCTTGGCTGGCTTGGTCGATTACGTCAATTCGTTTACGGTGTTGTACTTGCTAACGTCTAAATCGTCCAGTGGCGGCTGGTACGTGGGGCACGTATTTTATGTGGGCGTCATTTACCGCTATATCACGTTAGCCGTTGTCGCTGTCGGATCCACAATTAACAGTCGGCTGCAATCGAGTGGCTACAAGGACGTGTCCTACAAACGTGCCATCGATCGAATTTGA
PROTEIN sequence
Length: 403
MQKTVTQPLWKRALALVSITVWMVWGYIRLMPPPSLIRHGQLVVSGYDLWSFKNLAYSDIVKLYETRYLFLHLIPYIQNRIEYPVITGIFMSLAAVGHGIKSYFLVTFIIFWLIAILVYFLMERLVPEQAIFFAVLPLLMVYGLLNWDVLGIGFMVVAWYLYQRQQYTWSAIIFCFGVFAKLFPVFFLPFIIAELVRKRQLQTLWRMIGAFFATALIINVPFAVGNFKNWSYFFTYNAGRGLGADIYANEWIHGITTAQANMFSLIVVVLTVLYLMWQVYRGARIIDATALSFTVFLFVNKVYSPQYTLWVFVLAILAQWPIWTYVVLTLAGLVDYVNSFTVLYLLTSKSSSGGWYVGHVFYVGVIYRYITLAVVAVGSTINSRLQSSGYKDVSYKRAIDRI*