ggKbase home page

AMDSBA3_30_24

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(22124..23047)

Top 3 Functional Annotations

Value Algorithm Source
hmgL; pyruvate carboxyltransferase similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 294.0
  • Bit_score: 230
  • Evalue 8.60e-58
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V7M2_9RHOB (db=UNIREF evalue=4.1e-50 bit_score=204.1 identity=41.9 coverage=88.31168831168831) similarity UNIREF
DB: UNIREF
  • Identity: 41.9
  • Coverage: 88.31
  • Bit_score: 204
  • Evalue 4.10e-50
AIPM_HOMOCIT_SYNTH_1 (db=PatternScan db_id=PS00815 from=16 to=32 evalue=0.0 interpro_id=IPR002034 interpro_description=Alpha-isopropylmalate/homocitrate synthase, conserved site GO=Biological Process: carboxylic acid metabolic process (GO:0019752), Molecular Function: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer (GO:0046912)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicyclobacillus acidocaldarius → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 924
ATGCACTTACATTCGGGACCGTTTGTCAGCGTTGTTGACGTCACTTTGCGGGATGGCCTGCAGGATCAGCCCCAGTTTGTCGCGACGGCAGACAAGGTGCGGATTGCGCAATTGTTGATGGGTGCAGGCTATCGAGAACTTGAAGTCACGTCGATGATGCGGCCTGATTGGATTGCGCAAACGGCCGACGCTGAAGAGGTATTGGCGCATCTTGCGCCAGCCCCAGGTGTTCGTCGCCACGTCTTAGTGCCCAACCGCCGCGGCTTGGACCGGGCTTTGAAGACGAACGCGGAAGTGGTGACCTTTGTGATTTCGGCCAGCACGCTGCATAACCAGCACAACTTGAACTGCACGACGGCGGAGAGTGTCGGACGCGTTCGCCCGTTGGTTGAGGAAGCCAAGCGAGCGGGACGAGACGTCCGCGGAACGGTATCCACGGCTTTTGGGTGTACGCTGCAAGGAGATATCTCGGCGCAAGAGGTGCTGGCGGTAGTGGACCCCTATGTGGAGGCAGGCGTGGACCAGATTTGCCTGGCCGATACGGTGGGATTAGCTCGGTTGGGCCGATTTGAGGCGATTCTTGACGTCGTGTTGGCCAGAGTGTCGAGCGATCGCGTGGCCCTGCATTTGCACGAAAGGCCCGGGGAGGCCATCACCGAGATGGTGGAGGCGGGGTTGAGTGGCGGCATTCGGGTGTTCGATAGCGCTATTGGGGGGCTGGGGGGATGCCCATTTGCTCCCGGAGCACCTGGAAATCTAAAGGCAGAATGGCTCCTTCCCTATCTTCATGACCACGGTTACCAAACCGGCATTGACAGCGTCGCACTGACCGAGATAGCACTGGCTCTGGGTGTGGCTTTGGGAAAGGGCAAGCCCATCCAAGGACACGGCCAAAGCAATGTGAGCGATGGCGCGCCGGCGTAG
PROTEIN sequence
Length: 308
MHLHSGPFVSVVDVTLRDGLQDQPQFVATADKVRIAQLLMGAGYRELEVTSMMRPDWIAQTADAEEVLAHLAPAPGVRRHVLVPNRRGLDRALKTNAEVVTFVISASTLHNQHNLNCTTAESVGRVRPLVEEAKRAGRDVRGTVSTAFGCTLQGDISAQEVLAVVDPYVEAGVDQICLADTVGLARLGRFEAILDVVLARVSSDRVALHLHERPGEAITEMVEAGLSGGIRVFDSAIGGLGGCPFAPGAPGNLKAEWLLPYLHDHGYQTGIDSVALTEIALALGVALGKGKPIQGHGQSNVSDGAPA*