ggKbase home page

AMDSBA3_31_1

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(199..618)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 142.0
  • Bit_score: 209
  • Evalue 7.10e-52
RNA binding S1 domain protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ00_9FIRM (db=UNIREF evalue=1.4e-32 bit_score=144.8 identity=55.1 coverage=89.28571428571429) similarity UNIREF
DB: UNIREF
  • Identity: 55.1
  • Coverage: 89.29
  • Bit_score: 144
  • Evalue 1.40e-32
TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=3 to=126 evalue=2.4e-17) iprscan interpro
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 420
ATGGCATCTGAATTAGAAGTTGGCCAAATAGTAGAGGGCACCATCAGTGGAATTACCCACTTTGGAGCCTTTGTTGTGCTGCCCAACGGTAGGACGGGGTTAGTGCATATTTCGGAAGTGGCAGATGCCTATGTCAAGGACATCAAAGACTACTACAAGGAAAATGACAAGGTCCAGGTTAAAGTGTTGTCGATGGATCCAAAGGGCAAAATTGCATTGTCAATCCGACAATCGCAACCAAAGTCAGATCAAGCCCCAGCCCGCGAGAGCGCTCCGCGGCGCGAACATCGGCATGAGCGGCGCGGCAGCCAACAGATATCTTTTGAAGACAAGGTACAGCGGTTTATGCGGGACAGTGAAGATAGGCTGGGAGATCTGCGGCGCAGCAACGATGCCAAGCGAGGCGGCCGTGGCGCCTAA
PROTEIN sequence
Length: 140
MASELEVGQIVEGTISGITHFGAFVVLPNGRTGLVHISEVADAYVKDIKDYYKENDKVQVKVLSMDPKGKIALSIRQSQPKSDQAPARESAPRREHRHERRGSQQISFEDKVQRFMRDSEDRLGDLRRSNDAKRGGRGA*