ggKbase home page

AMDSBA3_34_13

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 14111..15376

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 394.0
  • Bit_score: 255
  • Evalue 2.60e-65
Sugar ABC transporter solute-binding protein n=1 Tax=Streptomyces hygroscopicus subsp. jinggangensis 5008 RepID=H2K8Z4_STRHJ (db=UNIREF evalue=2.9e-14 bit_score=85.5 identity=26.5 coverage=80.56872037914692) similarity UNIREF
DB: UNIREF
  • Identity: 26.5
  • Coverage: 80.57
  • Bit_score: 85
  • Evalue 2.90e-14
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGAGCAAAGCGCGTAAATTGAAGGCGGTAACCGGGATATCTGCCTTACTGATGGTTTGTGGCACTGCCACGGCGTTTGGCCGGGTTCCAGCTGCGACGGCGAAACCAGTGACCATAACCTTTGATGCAATGGAATACAGTGCCGCAGCGCTTAAGTTCTTTCCCAGATTTGCCAAGGAATTTGAAGCTACCCACCCTAATATTAAAGTGAATGTTCGGGTGATCAGCTGGTCGTCAGGTGAACAAGTACTGAATACTGAGATTGGAGCAGGACACGCGCCAAACGTAGCGATTATCGGAACCCGATGGCTTCCGGGGTATGTTAATGATGGACTGATTCAGCCACTGACTTCTTATATGACTCCGTCGTTTACCCGTGAATTTTATCCGGCCGCCCTGGACTCGGTCAAATATAAGGGAACGGTATATGCGCTTCCGGAGGCTATGTCAGTACGGCTATTGGTGTACAACAAAAATCTTTTCAAAAAGGCAGGTATCGCTGGCCCGCCCAAGACATGGACTCAGTTGGCGGCCGATGCCATCAAAATACACAAAAAGACTGGCCAGTCCGGTTATGCTTTAGTGGGCTCGCAAGTTGAAACCTCACTCGACTACTGGTACCCGATGTGGGGATTCGGAGGGAAAATATTCAGCGGCGCAAGCGGGGCTGCGGCAGCCAGTCCGGCCGACGTGAAGGCTTTGCAGTTCTTGGTTAACCTGATTCATAACGGGGGTACGGAAGCCAGTGTGACAGCGGCGACGCGAACCGGGCTTGAACCTGTCTTTGCGGCAGGTAAGATTGGCATGATGATCGATGGCCCGTGGTTGGTGGCTGATGCCTTAGCTGCTAAGCTTCCAGTTGGTGTTGCGAGTGTCCCCAGTCAACCTGGCGTTCCTGCAAAGAACGTTGCGATTACCGACTCGTTTGTGATGTTCAAAAATTCATCGAAAGCGCAACTGAAAGCTGCGTGGGAATTTACGCAGTTTATGTTTACCAAACCTGTGAGAACGTACTTTGATAAAGTTGAGGGTATGTTGCCAACTATGAAGATCGTGGGTCAGGAGCCGTTCTTCCGAAATTCTCCGGAGTTTGCTCCTTATCTTAAGGCATTGAACGGCCCAACGCGATTTGAACCTGTCGTCCCGGGTTTTCAAGCTGTTTCTCTGGCATACACCGATGCCGTAGAGGCTGCCTATAGTGGTTCGTTAAGTCCAAAGCAGGCACTCCAGCAGGCGGTCCCCAAGATAACAGCTGCGTTAAAGTAA
PROTEIN sequence
Length: 422
MSKARKLKAVTGISALLMVCGTATAFGRVPAATAKPVTITFDAMEYSAAALKFFPRFAKEFEATHPNIKVNVRVISWSSGEQVLNTEIGAGHAPNVAIIGTRWLPGYVNDGLIQPLTSYMTPSFTREFYPAALDSVKYKGTVYALPEAMSVRLLVYNKNLFKKAGIAGPPKTWTQLAADAIKIHKKTGQSGYALVGSQVETSLDYWYPMWGFGGKIFSGASGAAAASPADVKALQFLVNLIHNGGTEASVTAATRTGLEPVFAAGKIGMMIDGPWLVADALAAKLPVGVASVPSQPGVPAKNVAITDSFVMFKNSSKAQLKAAWEFTQFMFTKPVRTYFDKVEGMLPTMKIVGQEPFFRNSPEFAPYLKALNGPTRFEPVVPGFQAVSLAYTDAVEAAYSGSLSPKQALQQAVPKITAALK*