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AMDSBA3_34

Alias: AMDSBA3_C33

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_34_1
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

896..1849
DNA (954bp) protein (318aa)
Ion transport 2 domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=60)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=37)
AMDSBA3_34_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1858..2256)
DNA (399bp) protein (133aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTF8_9FIRM (db=UNIREF evalue=1.0e-42 bit_score=178.3 identity=61.8 coverage=97.74436090225564)
UPF0047 (db=PatternScan db_id=PS01314 from=93 to=111 evalue=0.0 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
YjbQ-like (db=superfamily db_id=SSF111038 from=1 to=131 evalue=3.3e-40 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
AMDSBA3_34_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2704..3840
DNA (1137bp) protein (379aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
Alanine dehydrogenase/PNT, N-terminal domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXF0_9SPHN (db=UNIREF evalue=1.6e-59 bit_score=235.7 identity=38.8 coverage=94.9868073878628)
ALADH_PNT_2 (db=PatternScan db_id=PS00837 from=160 to=185 evalue=0.0 interpro_id=IPR008143 interpro_description=Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
NADP TRANSHYDROGENASE (db=HMMPanther db_id=PTHR10160:SF2 from=2 to=366 evalue=1.4e-118)
AMDSBA3_34_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3821..4117
DNA (297bp) protein (99aa)
NAD/NADP transhydrogenase alpha subunit-like protein
NAD(P) transhydrogenase (Subunit alpha) pntAb n=44 Tax=Mycobacterium tuberculosis complex RepID=A2VN84_MYCTU (db=UNIREF evalue=1.6e-16 bit_score=90.9 identity=53.8 coverage=88.88888888888889)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
AMDSBA3_34_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4114..5478
DNA (1365bp) protein (455aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P)(+) transhydrogenase (AB-specific) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFJ4_9FIRM (db=UNIREF evalue=2.5e-88 bit_score=331.6 identity=43.0 coverage=97.36263736263736)
transmembrane_regions (db=TMHMM db_id=tmhmm from=178 to=200)
transmembrane_regions (db=TMHMM db_id=tmhmm from=207 to=226)
AMDSBA3_34_6
unknown

Not on your lists

5612..5731
DNA (120bp) protein (40aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBA3_34_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6391..8991
DNA (2601bp) protein (867aa)
ppc; phosphoenolpyruvate carboxylase
Phosphoenolpyruvate carboxylase n=7 Tax=Alphaproteobacteria RepID=CAPP_METEA (db=UNIREF evalue=1.5e-89 bit_score=336.7 identity=29.7 coverage=94.4636678200692)
seg (db=Seg db_id=seg from=415 to=442)
seg (db=Seg db_id=seg from=566 to=581)
AMDSBA3_34_8
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9124..9561
DNA (438bp) protein (146aa)
MaoC domain protein
MaoC-like dehydratase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G7W8_9RHIZ (db=UNIREF evalue=9.2e-16 bit_score=89.0 identity=35.1 coverage=94.52054794520548)
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=1 to=144 evalue=3.5e-30)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=1 to=141 evalue=5.5e-27)
AMDSBA3_34_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9618..10733
DNA (1116bp) protein (372aa)
shikimate/quinate 5-dehydrogenase
shikimate/quinate 5-dehydrogenase
Shikimate/quinate 5-dehydrogenase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRQ5_9FIRM (db=UNIREF evalue=3.8e-66 bit_score=257.7 identity=46.9 coverage=72.58064516129032)
seg (db=Seg db_id=seg from=161 to=178)
AMDSBA3_34_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10753..11160)
DNA (408bp) protein (136aa)
hypothetical protein
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=1 to=135 evalue=2.5e-25 interpro_id=IPR009002 interpro_description=FMN-binding split barrel-related)
(db=HMMPfam db_id=PF01613 from=26 to=132 evalue=7.0e-17 interpro_id=IPR002563 interpro_description=Flavin reductase-like, FMN-binding GO=Molecular Function: FMN binding (GO:0010181), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: flavin reductase activity (GO:0042602), Biological Process: oxidation-reduction process (GO:0055114))
no description (db=Gene3D db_id=G3DSA:2.30.110.10 from=5 to=133 evalue=1.0e-16 interpro_id=IPR012349 interpro_description=FMN-binding split barrel GO=Molecular Function: FMN binding (GO:0010181), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA3_34_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11374..12084
DNA (711bp) protein (237aa)
seg (db=Seg db_id=seg from=54 to=69)
seg (db=Seg db_id=seg from=189 to=200)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ40603.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA3_34_12
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12854..14071
DNA (1218bp) protein (406aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PRU5_9BACT (db=UNIREF evalue=2.3e-16 bit_score=92.4 identity=25.2 coverage=84.97536945812809)
ARGE_DAPE_CPG2_1 (db=PatternScan db_id=PS00758 from=90 to=99 evalue=0.0 interpro_id=IPR001261 interpro_description=ArgE/DapE/ACY1/CPG2/YscS, conserved site GO=Biological Process: proteolysis (GO:0006508), Molecular Function: metallopeptidase activity (GO:0008237))
PEPTIDASE M20 FAMILY MEMBER (db=HMMPanther db_id=PTHR11014 from=3 to=403 evalue=2.9e-51)
AMDSBA3_34_13
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14111..15376
DNA (1266bp) protein (422aa)
ABC-type sugar transport system, periplasmic component
Sugar ABC transporter solute-binding protein n=1 Tax=Streptomyces hygroscopicus subsp. jinggangensis 5008 RepID=H2K8Z4_STRHJ (db=UNIREF evalue=2.9e-14 bit_score=85.5 identity=26.5 coverage=80.56872037914692)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=211 to=227)
AMDSBA3_34_14
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15418..16347
DNA (930bp) protein (310aa)
binding--dependent transport system inner membrane component family protein
Inner membrane protein MalF n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3Q6_9ARCH (db=UNIREF evalue=8.2e-22 bit_score=110.2 identity=26.0 coverage=90.32258064516128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=173 to=195)
seg (db=Seg db_id=seg from=279 to=295)
AMDSBA3_34_15

Not on your lists

16344..17222
DNA (879bp) protein (293aa)
binding-protein-dependent transport systems inner membrane component
ABC-type maltodextrin transport system, permease component n=2 Tax=Desulfurococcus RepID=B8D3P8_DESK1 (db=UNIREF evalue=4.4e-17 bit_score=94.4 identity=26.6 coverage=89.76109215017065)
transmembrane_regions (db=TMHMM db_id=tmhmm from=255 to=277)
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
AMDSBA3_34_16
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17339..18484
DNA (1146bp) protein (382aa)
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJB8_BRAJP (db=UNIREF evalue=1.3e-58 bit_score=232.6 identity=39.4 coverage=92.40837696335078)
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=42 to=345 evalue=1.7e-61)
no description (db=Gene3D db_id=G3DSA:3.20.20.140 from=42 to=344 evalue=6.0e-56)
AMDSBA3_34_17
unknown

Not on your lists

18810..19103
DNA (294bp) protein (98aa)
18810..19103 + ( gc_cont=0.554)
AMDSBA3_34_18
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19458..20108)
DNA (651bp) protein (217aa)
hypothetical protein
YheO-like domain-containing protein n=1 Tax=Paenibacillus lactis 154 RepID=G4HJD1_9BACL (db=UNIREF evalue=4.5e-27 bit_score=127.1 identity=34.0 coverage=87.09677419354838)
(db=HMMPfam db_id=PF08348 from=11 to=122 evalue=4.2e-33 interpro_id=IPR013559 interpro_description=YheO-like)
Q9XAA3_STRCO_Q9XAA3; (db=BlastProDom db_id=PD037769 from=15 to=121 evalue=6.0e-18 interpro_id=IPR013559 interpro_description=YheO-like)
AMDSBA3_34_19
unknown

Not on your lists

comp(20514..20768)
DNA (255bp) protein (85aa)
20514..20768 - ( gc_cont=0.514)
AMDSBA3_34_20
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(20775..21536)
DNA (762bp) protein (254aa)
hypothetical protein
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P5N5_VIBME (db=UNIREF evalue=2.4e-27 bit_score=128.3 identity=32.9 coverage=94.48818897637796)
seg (db=Seg db_id=seg from=88 to=99)
ADH_SHORT (db=PatternScan db_id=PS00061 from=144 to=172 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
AMDSBA3_34_21
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

22116..22907
DNA (792bp) protein (264aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=E6TR70_BACCJ (db=UNIREF evalue=1.6e-50 bit_score=205.3 identity=41.6 coverage=93.93939393939394)
seg (db=Seg db_id=seg from=244 to=254)
Carbon-nitrogen hydrolase (db=superfamily db_id=SSF56317 from=2 to=252 evalue=1.3e-42 interpro_id=IPR003010 interpro_description=Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase GO=Biological Process: nitrogen compound metabolic process (GO:0006807), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
AMDSBA3_34_22
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23141..24145
DNA (1005bp) protein (335aa)
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase n=1 Tax=Vibrio sp. EJY3 RepID=H2IFG0_9VIBR (db=UNIREF evalue=8.5e-41 bit_score=173.3 identity=32.9 coverage=93.13432835820895)
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=11 to=261 evalue=3.0e-23 interpro_id=IPR011009 interpro_description=Protein kinase-like domain GO=Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772))
(db=HMMPfam db_id=PF01636 from=27 to=237 evalue=1.1e-18 interpro_id=IPR002575 interpro_description=Aminoglycoside phosphotransferase)
AMDSBA3_34_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24135..25415
DNA (1281bp) protein (427aa)
phosphopyruvate hydratase
Enolase (Fragment) n=1 Tax=Lithobius sp. SBH266126 RepID=Q6QWQ2_9MYRI (db=UNIREF evalue=2.4e-72 bit_score=278.5 identity=40.8 coverage=85.01170960187353)
ENOLASE (db=PatternScan db_id=PS00164 from=337 to=350 evalue=0.0 interpro_id=IPR020809 interpro_description=Enolase, conserved site GO=Cellular Component: phosphopyruvate hydratase complex (GO:0000015), Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: phosphopyruvate hydratase activity (GO:0004634), Biological Process: glycolysis (GO:0006096))
eno: phosphopyruvate hydratase (db=HMMTigr db_id=TIGR01060 from=3 to=423 evalue=1.3e-178 interpro_id=IPR000941 interpro_description=Enolase GO=Cellular Component: phosphopyruvate hydratase complex (GO:0000015), Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: phosphopyruvate hydratase activity (GO:0004634), Biological Process: glycolysis (GO:0006096))
AMDSBA3_34_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26080..26886
DNA (807bp) protein (269aa)
hypothetical protein rbh
Membrane protease subunit, stomatin/prohibitin homolog n=1 Tax=Methanopyrus kandleri AV19 RepID=Q8TX31_METKA (db=UNIREF evalue=3.6e-34 bit_score=151.0 identity=33.5 coverage=90.33457249070632)
seg (db=Seg db_id=seg from=171 to=183)
seg (db=Seg db_id=seg from=2 to=12)
AMDSBA3_34_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27178..28341
DNA (1164bp) protein (388aa)
amidohydrolase (EC:3.5.1.47)
Thermostable carboxypeptidase 1 n=12 Tax=Sulfolobus RepID=CBPX1_SULSO (db=UNIREF evalue=1.1e-63 bit_score=249.6 identity=36.8 coverage=95.87628865979381)
seg (db=Seg db_id=seg from=204 to=214)
Metal-dependent amidase/aminoacylase/carboxypeptidase (db=HMMPIR db_id=PIRSF005962 from=1 to=387 evalue=1.2e-117 interpro_id=IPR017439 interpro_description=Amidohydrolase GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA3_34_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28442..29179
DNA (738bp) protein (246aa)
type 11 methyltransferase
Methyltransferase type 11 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=E4M5N2_9FIRM (db=UNIREF evalue=8.7e-35 bit_score=152.9 identity=39.2 coverage=92.6829268292683)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=27 to=207 evalue=1.2e-39)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=7 to=245 evalue=1.2e-37)
AMDSBA3_34_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29322..30542)
DNA (1221bp) protein (407aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=1 Tax=Geobacter sp. M18 RepID=E8WUE4_GEOS8 (db=UNIREF evalue=4.2e-26 bit_score=124.8 identity=25.7 coverage=91.64619164619164)
transmembrane_regions (db=TMHMM db_id=tmhmm from=285 to=302)
transmembrane_regions (db=TMHMM db_id=tmhmm from=306 to=325)
AMDSBA3_34_28
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31317..33092)
DNA (1776bp) protein (592aa)
adenine deaminase (EC:3.5.4.2) rbh
Adenine deaminase n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP5_DICDC (db=UNIREF evalue=9.0e-78 bit_score=297.0 identity=35.8 coverage=94.93243243243244)
seg (db=Seg db_id=seg from=223 to=237)
seg (db=Seg db_id=seg from=491 to=500)
AMDSBA3_34_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33123..34067)
DNA (945bp) protein (315aa)
rihA; cytidine/uridine-specific hydrolase
Putative ribonucleoside hydrolase n=2 Tax=Ralstonia solanacearum RepID=D8P5V5_RALSL (db=UNIREF evalue=4.0e-40 bit_score=171.0 identity=38.7 coverage=96.5079365079365)
seg (db=Seg db_id=seg from=234 to=245)
seg (db=Seg db_id=seg from=26 to=44)
AMDSBA3_34_30
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34064..35263)
DNA (1200bp) protein (400aa)
amidohydrolase
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RVA9_TRIAD (db=UNIREF evalue=2.2e-51 bit_score=208.8 identity=34.2 coverage=93.75)
seg (db=Seg db_id=seg from=107 to=120)
Predicted amidohydrolase, ACY1L2 like (db=HMMPIR db_id=PIRSF037226 from=1 to=390 evalue=1.4e-135 interpro_id=IPR017144 interpro_description=Peptidase M20D, amidohydrolase, predicted)
Displaying items 1-30 of 32 in total

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