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AMDSBA3_42_13

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 15329..15592

Top 3 Functional Annotations

Value Algorithm Source
(db=HMMPfam db_id=PF00376 from=28 to=62 evalue=6.0e-12 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.00e-12
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=23 to=72 evalue=8.5e-12 interpro_id=IPR009061 interpro_description=DNA binding domain, putative GO=Molecular Function: nucleotide binding (GO:0000166)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.50e-12
no description (db=Gene3D db_id=G3DSA:1.10.1660.10 from=24 to=72 evalue=1.4e-06) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-06

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Taxonomy

Massilia sp. LC238 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGCGGCTTGGAGTCTCGGACTTGAAGGTTTGTGTCAATTATGTACAATATATGCCATAGAACGCACATTAACAAGTCACGAAGTGGCTCATCTACTTGGGGTCAACATCAAGACTATTCAACGGTGGGATCGCGAGGGACGACTGAAGCCCGCCGGTCGAACAGCGACGGGGCGGCGGTATTACACCGAGGACCAAATTCGAGCTTTCCGGCAGCAGCGGCCCGTGTCGCCTCGCCTTCGGAAGATCGTGGCCTATTGCTGA
PROTEIN sequence
Length: 88
MAAWSLGLEGLCQLCTIYAIERTLTSHEVAHLLGVNIKTIQRWDREGRLKPAGRTATGRRYYTEDQIRAFRQQRPVSPRLRKIVAYC*