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AMDSBA3_42_15

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 18426..19709

Top 3 Functional Annotations

Value Algorithm Source
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 426.0
  • Bit_score: 214
  • Evalue 6.80e-53
Periplasmic sugar-binding protein of sugar ABC transporter n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YTJ5_NOSS1 (db=UNIREF evalue=2.5e-29 bit_score=135.6 identity=28.3 coverage=85.04672897196261) similarity UNIREF
DB: UNIREF
  • Identity: 28.3
  • Coverage: 85.05
  • Bit_score: 135
  • Evalue 2.50e-29
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGGGTTGGAAACGCCGTCAGACTCTGGTATCCGCATTAGTCTGCTCATTGGGAGCCGCCGGATTCATAGCCACTGCAACTCCAATGGCATATGCAAGCTCGGGACCTGTGCAAATAACGTTCGCTACCGCATTTGTTACGCGATATCCCATATTTGTTAAGATTGTCAAGGCGTTTAACGCAAGTCACCCCGGCATTCACGTCACGATTGAGCACGAGCCCGGAAACACTTCCATGCTCACTAAGCTCTTAACTGAGCTCGCCACCGGCACAGCTCCTAACGTTGTGTTCCAGTACGGGCCCTGGGCGGACCAACTCGCCTCAACCAAAGGCATTGTGCCTTTAAACAGTTTCATCGCGAAATCGCACTATAATCTGAACGTGTTTTATAAAGACAATCTGGAAACGGACGACGTCAACGGAAAGATTATTGCCCTGCCTGGTGACAACGATAACGAGGCGGTTTTTTACAACAAGAAACTATTTGAAAAGTATCACGTGCCATTTCCGAAGCCTAACTGGACCTGGGCGCAGATGGTGGCGACGGCGAAGAAGCTCAATCACCCCAAGCAAAAGTATTACGGGATGCTTGAATTCATCGGCGACACCGAGGGCGTATCGGTGCGCTACGAACCCTTCTTGCTGCAGGCAGGAGGACACATCGTCAATGCCAAGGCGACAAAGGCGCTTTTTGACAGTGCGGCGGGACTAAAGGCGCTTACGTTCCTTAAGGATCTCGAGCCGTATTCGGATGTGGTACCGCGTTCCGAATATGAGGATGCATTTGAGTCCGGACGCGTAGCTATGACGTTTAGCGGTTCATGGGATGTTTCTACCTTTGCTAAAGATGGGATTGACTATGGGGTGGTACAGTTGCCTTCACCCACTCCGGGTGGATCGCATATGACACTGGCACAGCCCGATCTGAACCTGATCACCCAGTCAACACCGGCTAAAGAACAGGCCAGTTGGACTTTTTTGCAGTACTTGGACAGCGAAAAGAGCGCTGCGATGTTGGCAGCCCCAGGGCATTTGTCATTTCGTAAGGACGTCGTCAACAATCCCCTGTATAAGCCGACACTGGCCAAGTATCCCGTCTTGAAGCAGTTTGCGCAATATGCCAACGATGCGACCATTCGCCCCAAGTTCCCCCAGTACTCCGAAGTGTCACAAGACATGGCCACCGCAGTGGAAATGGTGCTGCTACACAAAGCGTCTCCCGCCGCTGCGTTAAAGCAAGAGGCACAGGCTGCGGACCAACAGTTGCAAAGCTCGGCACCCTAA
PROTEIN sequence
Length: 428
MGWKRRQTLVSALVCSLGAAGFIATATPMAYASSGPVQITFATAFVTRYPIFVKIVKAFNASHPGIHVTIEHEPGNTSMLTKLLTELATGTAPNVVFQYGPWADQLASTKGIVPLNSFIAKSHYNLNVFYKDNLETDDVNGKIIALPGDNDNEAVFYNKKLFEKYHVPFPKPNWTWAQMVATAKKLNHPKQKYYGMLEFIGDTEGVSVRYEPFLLQAGGHIVNAKATKALFDSAAGLKALTFLKDLEPYSDVVPRSEYEDAFESGRVAMTFSGSWDVSTFAKDGIDYGVVQLPSPTPGGSHMTLAQPDLNLITQSTPAKEQASWTFLQYLDSEKSAAMLAAPGHLSFRKDVVNNPLYKPTLAKYPVLKQFAQYANDATIRPKFPQYSEVSQDMATAVEMVLLHKASPAAALKQEAQAADQQLQSSAP*